Gene annotation
Transcriptome id Sobic.010G087400.2,Sobic.010G087400.3,Sobic.010G087400.1
Synonym Sb10g007565
Functional annotation growth regulator related protein, putative, expressed
UniProt C5Z6W7 , A0A1W0VS28 , A0A1W0VS07
Pfam PF10250
Panther DB PTHR31741 PTHR31741:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22460 : O-fucosyltransferase family protein
RAP-DB (Rice) LOC_Os06g11600.3 : growth regulator related protein, putative, expressed
MaizeGDB (Corn) Zm00025a042554
Brachypodium KQK18952 , KQK18953 , KQK18950 , KQK18951 , KQK18957 , KQK18954 , KQK18955 , PNT76201 , PNT76200 , PNT76199 , KQK18949 , KQK18956
Barley HORVU7Hr1G036450.7 , HORVU7Hr1G036450.6 , HORVU7Hr1G036450.5 , HORVU7Hr1G036450.4 , HORVU7Hr1G036450.3 , HORVU7Hr1G036450.2 , HORVU7Hr1G036450.1 , HORVU7Hr1G036450.8 , HORVU7Hr1G036450.26 , HORVU7Hr1G036450.27 , HORVU7Hr1G036450.24 , HORVU7Hr1G036450.25 , HORVU7Hr1G036450.22 , HORVU7Hr1G036450.23 , HORVU7Hr1G036450.20 , HORVU7Hr1G036450.21 , HORVU7Hr1G036450.28 , HORVU7Hr1G036450.19 , HORVU7Hr1G036450.18 , HORVU7Hr1G036450.17 , HORVU7Hr1G036450.16 , HORVU7Hr1G036450.15 , HORVU7Hr1G036450.14 , HORVU7Hr1G036450.13 , HORVU7Hr1G036450.12 , HORVU7Hr1G036450.11 , HORVU7Hr1G036450.10
Wheat TraesCS7D02G178800 , TraesCS7D02G178800 , TraesCS7D02G178800 , TraesCS7B02G082500 , TraesCS7B02G082500 , TraesCS7A02G177400 , TraesCS7A02G177400 , TraesCS7A02G177400
Populus PNT36988 , PNT36989


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
2 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
3 Sobic.003G230600 transcription factor X1, putative, expressed -
4 Sobic.004G254800 heat shock protein DnaJ, putative, expressed K19371: DnaJ homolog subfamily C member 25
5 Sobic.003G143800 nodal modulator 1 precursor, putative, expressed -
6 Sobic.004G223300 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
7 Sobic.010G172400 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
8 Sobic.010G223400 expressed protein -
9 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
10 Sobic.001G467100 SURF1, putative, expressed K14998: SURF1, surfeit locus 1 family protein
11 Sobic.001G097900 expressed protein -
12 Sobic.006G239400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11366: USP22_27_51, ubiquitin carboxyl-terminal hydrolase 22/27/51
13 Sobic.001G015400 elongation factor, putative, expressed K02355: fusA, GFM, elongation factor G
14 Sobic.006G260500 expressed protein -
15 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
16 Sobic.003G021600 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K13117: ATP-dependent RNA helicase DDX35
17 Sobic.001G099900 WD domain, G-beta repeat domain containing protein, expressed K14548: UTP4, U3 small nucleolar RNA-associated protein 4
18 Sobic.006G021700 expressed protein K17600: vacuolar protein sorting-associated protein 54
19 Sobic.001G474400 conserved oligomeric Golgi complex component 8, putative, expressed -
20 Sobic.001G211900 methyltransferase, putative, expressed K11437: type I protein arginine methyltransferase


Gene co-expression network
sample Sobic010G087400 Sobic010G087400 Sobic009G128500 Sobic009G128500 Sobic010G087400--Sobic009G128500 Sobic006G106300 Sobic006G106300 Sobic010G087400--Sobic006G106300 Sobic003G230600 Sobic003G230600 Sobic010G087400--Sobic003G230600 Sobic004G254800 Sobic004G254800 Sobic010G087400--Sobic004G254800 Sobic003G143800 Sobic003G143800 Sobic010G087400--Sobic003G143800 Sobic004G223300 Sobic004G223300 Sobic010G087400--Sobic004G223300 Sobic010G172400 Sobic010G172400 Sobic010G087400--Sobic010G172400 Sobic010G223400 Sobic010G223400 Sobic010G087400--Sobic010G223400 Sobic003G314300 Sobic003G314300 Sobic010G087400--Sobic003G314300 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic003G409900 Sobic003G409900 Sobic006G106300--Sobic003G409900 Sobic006G106300--Sobic003G021600 Sobic002G398700 Sobic002G398700 Sobic006G106300--Sobic002G398700 Sobic001G097900 Sobic001G097900 Sobic006G106300--Sobic001G097900 Sobic001G015400 Sobic001G015400 Sobic006G106300--Sobic001G015400 Sobic009G254100 Sobic009G254100 Sobic006G106300--Sobic009G254100 Sobic002G301100 Sobic002G301100 Sobic006G106300--Sobic002G301100 Sobic001G474400 Sobic001G474400 Sobic006G106300--Sobic001G474400 Sobic002G364900 Sobic002G364900 Sobic006G106300--Sobic002G364900 Sobic005G114500 Sobic005G114500 Sobic003G230600--Sobic005G114500 Sobic001G125500 Sobic001G125500 Sobic003G230600--Sobic001G125500 Sobic003G230600--Sobic009G128500 Sobic003G230600--Sobic001G308400 Sobic007G145400 Sobic007G145400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G230600--Sobic003G143800 Sobic002G363800 Sobic002G363800 Sobic003G230600--Sobic002G363800 Sobic001G097500 Sobic001G097500 Sobic003G230600--Sobic001G097500 Sobic003G346400 Sobic003G346400 Sobic004G254800--Sobic003G346400 Sobic001G389200 Sobic001G389200 Sobic004G254800--Sobic001G389200 Sobic004G078700 Sobic004G078700 Sobic004G254800--Sobic004G078700 Sobic003G394200 Sobic003G394200 Sobic004G254800--Sobic003G394200 Sobic001G161700 Sobic001G161700 Sobic004G254800--Sobic001G161700 Sobic004G254800--Sobic009G122500 Sobic004G060300 Sobic004G060300 Sobic004G254800--Sobic004G060300 Sobic002G395500 Sobic002G395500 Sobic004G254800--Sobic002G395500 Sobic003G394500 Sobic003G394500 Sobic004G254800--Sobic003G394500 Sobic008G124800 Sobic008G124800 Sobic003G143800--Sobic008G124800 Sobic006G021700 Sobic006G021700 Sobic003G143800--Sobic006G021700 Sobic003G143800--Sobic001G015400 Sobic007G155500 Sobic007G155500 Sobic003G143800--Sobic007G155500 Sobic003G143800--Sobic008G092800 Sobic002G340900 Sobic002G340900 Sobic003G143800--Sobic002G340900 Sobic004G141800 Sobic004G141800 Sobic003G143800--Sobic004G141800 Sobic003G143800--Sobic005G114500 Sobic003G405500 Sobic003G405500 Sobic003G143800--Sobic003G405500 Sobic004G147500 Sobic004G147500 Sobic004G223300--Sobic004G147500 Sobic004G223300--Sobic002G340900 Sobic001G065100 Sobic001G065100 Sobic004G223300--Sobic001G065100 Sobic002G042600 Sobic002G042600 Sobic004G223300--Sobic002G042600 Sobic004G223300--Sobic008G124800 Sobic005G062200 Sobic005G062200 Sobic004G223300--Sobic005G062200 Sobic003G039000 Sobic003G039000 Sobic004G223300--Sobic003G039000 Sobic001G382600 Sobic001G382600 Sobic004G223300--Sobic001G382600 Sobic002G401500 Sobic002G401500 Sobic004G223300--Sobic002G401500 Sobic001G467100 Sobic001G467100 Sobic010G172400--Sobic001G467100 Sobic003G222700 Sobic003G222700 Sobic010G172400--Sobic003G222700 Sobic002G399900 Sobic002G399900 Sobic010G172400--Sobic002G399900 Sobic006G091000 Sobic006G091000 Sobic010G172400--Sobic006G091000 Sobic002G182000 Sobic002G182000 Sobic010G172400--Sobic002G182000 Sobic010G172400--Sobic005G114500 Sobic010G172400--Sobic001G474400 Sobic010G172400--Sobic001G097900 Sobic001G012900 Sobic001G012900 Sobic010G172400--Sobic001G012900 Sobic010G223400--Sobic009G122500 Sobic010G223400--Sobic003G394200 Sobic005G059500 Sobic005G059500 Sobic010G223400--Sobic005G059500 Sobic001G193100 Sobic001G193100 Sobic010G223400--Sobic001G193100 Sobic003G182300 Sobic003G182300 Sobic010G223400--Sobic003G182300 Sobic010G223400--Sobic005G114500 Sobic010G223400--Sobic001G474400 Sobic010G223400--Sobic004G078700 Sobic010G223400--Sobic001G012900 Sobic003G314300--Sobic001G097500 Sobic005G017200 Sobic005G017200 Sobic003G314300--Sobic005G017200 Sobic003G314300--Sobic010G223400 Sobic003G314300--Sobic001G193100 Sobic003G314300--Sobic005G114500 Sobic003G314300--Sobic009G128500 Sobic004G207900 Sobic004G207900 Sobic003G314300--Sobic004G207900 Sobic003G314300--Sobic001G097900 Sobic002G290100 Sobic002G290100 Sobic003G314300--Sobic002G290100
Octagon: transcription factors


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