Gene annotation
Transcriptome id Sobic.003G184666.1
Synonym -
Functional annotation -
UniProt A0A1W0VXY1
Pfam -
Panther DB PTHR32212 PTHR32212:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G28410 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g10330.1 : OsFBX416 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G252200 PPR repeat domain containing protein, putative, expressed -
2 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
3 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
4 Sobic.003G183466 - -
5 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
6 Sobic.003G325900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide repeat, putative, expressed -
7 Sobic.003G045450 - -
8 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
9 Sobic.004G222150 - -
10 Sobic.007G082000 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
11 Sobic.003G147500 PHS1, putative, expressed K14165: atypical dual specificity phosphatase
12 Sobic.003G326500 apurinic endonuclease-redox protein, putative, expressed K01142: E3.1.11.2, exodeoxyribonuclease III
13 Sobic.005G075800 rp3 protein, putative, expressed -
14 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
15 Sobic.008G141900 ZOS12-07 - C2H2 zinc finger protein, expressed -
16 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
17 Sobic.003G204100 expressed protein -
18 Sobic.006G088820 - -
19 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
20 Sobic.009G014000 expressed protein -


Gene co-expression network
sample Sobic003G184666 Sobic003G184666 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic005G078700 Sobic005G078700 Sobic003G184666--Sobic005G078700 Sobic010G143600 Sobic010G143600 Sobic003G184666--Sobic010G143600 Sobic003G183466 Sobic003G183466 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G325900 Sobic003G325900 Sobic003G184666--Sobic003G325900 Sobic003G045450 Sobic003G045450 Sobic003G184666--Sobic003G045450 Sobic002G362200 Sobic002G362200 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150 Sobic010G252200--Sobic006G126800 Sobic005G210500 Sobic005G210500 Sobic010G252200--Sobic005G210500 Sobic009G081800 Sobic009G081800 Sobic010G252200--Sobic009G081800 Sobic001G486600 Sobic001G486600 Sobic010G252200--Sobic001G486600 Sobic010G252200--Sobic003G184666 Sobic006G119300 Sobic006G119300 Sobic010G252200--Sobic006G119300 Sobic001G268300 Sobic001G268300 Sobic010G252200--Sobic001G268300 Sobic010G252200--Sobic002G362200 Sobic010G252200--Sobic003G045450 Sobic005G078700--Sobic003G325900 Sobic005G078700--Sobic010G143600 Sobic005G078700--Sobic003G184666 Sobic005G078700--Sobic001G268300 Sobic005G078700--Sobic002G362200 Sobic006G262800 Sobic006G262800 Sobic005G078700--Sobic006G262800 Sobic004G282500 Sobic004G282500 Sobic005G078700--Sobic004G282500 Sobic009G154900 Sobic009G154900 Sobic005G078700--Sobic009G154900 Sobic009G105400 Sobic009G105400 Sobic005G078700--Sobic009G105400 Sobic010G143600--Sobic005G078700 Sobic002G173400 Sobic002G173400 Sobic010G143600--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic010G143600--Sobic003G194800 Sobic009G120400 Sobic009G120400 Sobic010G143600--Sobic009G120400 Sobic010G143600--Sobic003G183466 Sobic003G204100 Sobic003G204100 Sobic010G143600--Sobic003G204100 Sobic006G008300 Sobic006G008300 Sobic010G143600--Sobic006G008300 Sobic003G397100 Sobic003G397100 Sobic010G143600--Sobic003G397100 Sobic010G143600--Sobic003G184666 Sobic003G326500 Sobic003G326500 Sobic003G183466--Sobic003G326500 Sobic003G183466--Sobic010G143600 Sobic003G183466--Sobic002G173400 Sobic003G129500 Sobic003G129500 Sobic003G183466--Sobic003G129500 Sobic004G278900 Sobic004G278900 Sobic003G183466--Sobic004G278900 Sobic003G183466--Sobic009G120400 Sobic002G095300 Sobic002G095300 Sobic003G183466--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic003G183466--Sobic002G286632 Sobic008G046200 Sobic008G046200 Sobic003G183466--Sobic008G046200 Sobic006G126800--Sobic009G081800 Sobic006G126800--Sobic010G252200 Sobic010G269800 Sobic010G269800 Sobic006G126800--Sobic010G269800 Sobic002G426100 Sobic002G426100 Sobic006G126800--Sobic002G426100 Sobic006G127200 Sobic006G127200 Sobic006G126800--Sobic006G127200 Sobic006G126800--Sobic002G173400 Sobic006G126800--Sobic002G095300 Sobic006G126800--Sobic002G286632 Sobic006G126800--Sobic005G210500 Sobic003G325900--Sobic005G078700 Sobic003G325900--Sobic004G282500 Sobic003G325900--Sobic003G184666 Sobic003G325900--Sobic001G268300 Sobic003G325900--Sobic002G362200 Sobic003G325900--Sobic003G045450 Sobic008G123200 Sobic008G123200 Sobic003G325900--Sobic008G123200 Sobic006G088820 Sobic006G088820 Sobic003G325900--Sobic006G088820 Sobic003G412000 Sobic003G412000 Sobic003G325900--Sobic003G412000 Sobic008G141900 Sobic008G141900 Sobic003G045450--Sobic008G141900 Sobic001G376501 Sobic001G376501 Sobic003G045450--Sobic001G376501 Sobic003G045450--Sobic003G204100 Sobic005G212201 Sobic005G212201 Sobic003G045450--Sobic005G212201 Sobic009G163400 Sobic009G163400 Sobic003G045450--Sobic009G163400 Sobic004G276000 Sobic004G276000 Sobic003G045450--Sobic004G276000 Sobic002G064800 Sobic002G064800 Sobic003G045450--Sobic002G064800 Sobic007G122700 Sobic007G122700 Sobic003G045450--Sobic007G122700 Sobic001G010500 Sobic001G010500 Sobic003G045450--Sobic001G010500 Sobic008G111600 Sobic008G111600 Sobic002G362200--Sobic008G111600 Sobic010G252700 Sobic010G252700 Sobic002G362200--Sobic010G252700 Sobic008G090000 Sobic008G090000 Sobic002G362200--Sobic008G090000 Sobic008G179000 Sobic008G179000 Sobic002G362200--Sobic008G179000 Sobic002G362200--Sobic002G426100 Sobic001G537400 Sobic001G537400 Sobic002G362200--Sobic001G537400 Sobic002G362200--Sobic001G268300 Sobic008G031200 Sobic008G031200 Sobic002G362200--Sobic008G031200 Sobic003G147500 Sobic003G147500 Sobic002G362200--Sobic003G147500 Sobic010G211200 Sobic010G211200 Sobic004G222150--Sobic010G211200 Sobic004G123200 Sobic004G123200 Sobic004G222150--Sobic004G123200 Sobic009G241900 Sobic009G241900 Sobic004G222150--Sobic009G241900 Sobic008G191700 Sobic008G191700 Sobic004G222150--Sobic008G191700 Sobic003G427000 Sobic003G427000 Sobic004G222150--Sobic003G427000 Sobic004G222150--Sobic005G212201 Sobic009G012500 Sobic009G012500 Sobic004G222150--Sobic009G012500 Sobic004G222150--Sobic008G141900 Sobic001G393101 Sobic001G393101 Sobic004G222150--Sobic001G393101
Octagon: transcription factors


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