Gene annotation
Transcriptome id Sobic.008G111600.1
Synonym Hsp89.1, AtHsp90-6, Sb08g016560, AtHsp90.6
Functional annotation heat shock protein, putative, expressed
UniProt A0A1B6PCZ0
Pfam PF02518 PF00183
Panther DB PTHR11528 PTHR11528:SF41
NCBI CDD -
KEGG Orthology K09487; HSP90B, heat shock protein 90kDa beta
Gene Ontology GO:0006950; response to stress GO:0006457protein folding GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G07770 : HEAT SHOCK PROTEIN 89.1
RAP-DB (Rice) LOC_Os12g32986.1 : heat shock protein, putative, expressed
MaizeGDB (Corn) Zm00025a040623 , Zm00025a027448 , Zm00025a025572
Brachypodium KQJ90629 , KQJ90630 , KQJ86566 , KQJ86565
Barley HORVU5Hr1G027910.18 , HORVU5Hr1G027910.19 , HORVU5Hr1G027910.14 , HORVU5Hr1G027910.15 , HORVU5Hr1G027910.16 , HORVU5Hr1G027910.17 , HORVU5Hr1G027910.10 , HORVU5Hr1G027910.11 , HORVU5Hr1G027910.12 , HORVU5Hr1G027910.13 , HORVU5Hr1G027910.21 , HORVU5Hr1G027910.20 , HORVU5Hr1G027910.22 , HORVU5Hr1G027910.6 , HORVU5Hr1G027910.7 , HORVU5Hr1G027910.4 , HORVU5Hr1G027910.5 , HORVU5Hr1G027910.2 , HORVU5Hr1G027910.3 , HORVU5Hr1G027910.1 , HORVU5Hr1G027910.8 , HORVU5Hr1G027910.9
Wheat TraesCS5D02G258900 , TraesCS5D02G258900 , TraesCS5B02G249000 , TraesCS5B02G249000 , TraesCS5B02G249000 , TraesCS5A02G251000 , TraesCS5B02G106300 , TraesCS5D02G113700 , TraesCS5D02G113700 , TraesCS5A02G101900 , TraesCS5A02G101900
Populus PNT24041 , PNT24042 , PNT24043 , PNT16373 , PNT16372 , PNT16371


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G426100 aldehyde dehydrogenase, putative, expressed -
2 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
3 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
4 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
5 Sobic.002G043000 HEN1, putative, expressed -
6 Sobic.001G024000 expressed protein K14844: pumilio homology domain family member 6
7 Sobic.002G078100 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
9 Sobic.003G144000 pentatricopeptide, putative, expressed -
10 Sobic.005G098000 serpin domain containing protein, putative, expressed K13963: serpin B
11 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
12 Sobic.008G068100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
13 Sobic.004G322300 nucleotide binding protein, putative, expressed K03351: anaphase-promoting complex subunit 4
14 Sobic.006G017800 ELM2 domain containing protein, putative, expressed -
15 Sobic.005G088900 AGAP007117-PA, putative, expressed -
16 Sobic.003G412000 tRNA methyltransferase, putative, expressed K03256: TRM6, tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
17 Sobic.002G112600 zinc finger family protein, putative, expressed -
18 Sobic.003G173400 tetratricopeptide repeat protein 5, putative, expressed -
19 Sobic.006G206200 - -
20 Sobic.003G135500 sugar transporter superfamily, putative, expressed -


Gene co-expression network
sample Sobic008G111600 Sobic008G111600 Sobic002G426100 Sobic002G426100 Sobic008G111600--Sobic002G426100 Sobic006G181800 Sobic006G181800 Sobic008G111600--Sobic006G181800 Sobic002G362200 Sobic002G362200 Sobic008G111600--Sobic002G362200 Sobic004G215900 Sobic004G215900 Sobic008G111600--Sobic004G215900 Sobic002G043000 Sobic002G043000 Sobic008G111600--Sobic002G043000 Sobic001G024000 Sobic001G024000 Sobic008G111600--Sobic001G024000 Sobic002G078100 Sobic002G078100 Sobic008G111600--Sobic002G078100 Sobic002G003300 Sobic002G003300 Sobic008G111600--Sobic002G003300 Sobic003G144000 Sobic003G144000 Sobic008G111600--Sobic003G144000 Sobic009G120400 Sobic009G120400 Sobic002G426100--Sobic009G120400 Sobic002G426100--Sobic008G111600 Sobic002G426100--Sobic006G181800 Sobic002G426100--Sobic002G078100 Sobic002G426100--Sobic002G043000 Sobic006G017800 Sobic006G017800 Sobic002G426100--Sobic006G017800 Sobic002G066800 Sobic002G066800 Sobic002G426100--Sobic002G066800 Sobic007G186400 Sobic007G186400 Sobic002G426100--Sobic007G186400 Sobic004G129500 Sobic004G129500 Sobic002G426100--Sobic004G129500 Sobic006G181800--Sobic008G111600 Sobic004G038100 Sobic004G038100 Sobic006G181800--Sobic004G038100 Sobic006G181800--Sobic002G426100 Sobic006G033101 Sobic006G033101 Sobic006G181800--Sobic006G033101 Sobic002G371600 Sobic002G371600 Sobic006G181800--Sobic002G371600 Sobic006G181800--Sobic002G043000 Sobic008G092800 Sobic008G092800 Sobic006G181800--Sobic008G092800 Sobic006G236000 Sobic006G236000 Sobic006G181800--Sobic006G236000 Sobic010G188000 Sobic010G188000 Sobic006G181800--Sobic010G188000 Sobic002G362200--Sobic008G111600 Sobic010G252700 Sobic010G252700 Sobic002G362200--Sobic010G252700 Sobic008G090000 Sobic008G090000 Sobic002G362200--Sobic008G090000 Sobic008G179000 Sobic008G179000 Sobic002G362200--Sobic008G179000 Sobic002G362200--Sobic002G426100 Sobic001G537400 Sobic001G537400 Sobic002G362200--Sobic001G537400 Sobic001G268300 Sobic001G268300 Sobic002G362200--Sobic001G268300 Sobic008G031200 Sobic008G031200 Sobic002G362200--Sobic008G031200 Sobic003G147500 Sobic003G147500 Sobic002G362200--Sobic003G147500 Sobic008G068100 Sobic008G068100 Sobic004G215900--Sobic008G068100 Sobic004G215900--Sobic006G236000 Sobic009G191500 Sobic009G191500 Sobic004G215900--Sobic009G191500 Sobic004G215900--Sobic002G003300 Sobic004G215900--Sobic001G024000 Sobic004G215900--Sobic008G111600 Sobic004G215900--Sobic004G038100 Sobic002G112600 Sobic002G112600 Sobic004G215900--Sobic002G112600 Sobic004G215900--Sobic002G043000 Sobic002G043000--Sobic008G111600 Sobic002G043000--Sobic004G215900 Sobic002G043000--Sobic002G426100 Sobic002G043000--Sobic006G236000 Sobic002G043000--Sobic008G068100 Sobic002G043000--Sobic006G181800 Sobic002G043000--Sobic004G038100 Sobic006G280100 Sobic006G280100 Sobic002G043000--Sobic006G280100 Sobic002G043000--Sobic004G129500 Sobic001G024000--Sobic004G215900 Sobic010G205900 Sobic010G205900 Sobic001G024000--Sobic010G205900 Sobic001G024000--Sobic008G111600 Sobic009G246500 Sobic009G246500 Sobic001G024000--Sobic009G246500 Sobic001G024000--Sobic008G068100 Sobic003G412000 Sobic003G412000 Sobic001G024000--Sobic003G412000 Sobic008G049100 Sobic008G049100 Sobic001G024000--Sobic008G049100 Sobic003G123200 Sobic003G123200 Sobic001G024000--Sobic003G123200 Sobic001G024000--Sobic002G003300 Sobic002G078100--Sobic002G066800 Sobic002G078100--Sobic002G426100 Sobic002G078100--Sobic009G120400 Sobic008G047500 Sobic008G047500 Sobic002G078100--Sobic008G047500 Sobic006G191200 Sobic006G191200 Sobic002G078100--Sobic006G191200 Sobic001G051400 Sobic001G051400 Sobic002G078100--Sobic001G051400 Sobic002G078100--Sobic008G111600 Sobic003G194800 Sobic003G194800 Sobic002G078100--Sobic003G194800 Sobic007G034200 Sobic007G034200 Sobic002G078100--Sobic007G034200 Sobic002G003300--Sobic004G215900 Sobic002G003300--Sobic009G191500 Sobic002G003300--Sobic008G068100 Sobic002G003300--Sobic008G111600 Sobic005G088900 Sobic005G088900 Sobic002G003300--Sobic005G088900 Sobic002G003300--Sobic006G236000 Sobic002G003300--Sobic002G043000 Sobic002G003300--Sobic001G024000 Sobic002G003300--Sobic006G181800 Sobic003G144000--Sobic005G088900 Sobic001G199500 Sobic001G199500 Sobic003G144000--Sobic001G199500 Sobic010G038800 Sobic010G038800 Sobic003G144000--Sobic010G038800 Sobic003G144000--Sobic008G111600 Sobic003G432300 Sobic003G432300 Sobic003G144000--Sobic003G432300 Sobic005G098000 Sobic005G098000 Sobic003G144000--Sobic005G098000 Sobic004G082700 Sobic004G082700 Sobic003G144000--Sobic004G082700 Sobic003G144000--Sobic006G181800 Sobic001G200200 Sobic001G200200 Sobic003G144000--Sobic001G200200
Octagon: transcription factors


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