Gene annotation
Transcriptome id Sobic.006G206200.1
Synonym Sb06g027725
Functional annotation -
UniProt C5YFI3
Pfam -
Panther DB PTHR35161 PTHR35161:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G206200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G043000 HEN1, putative, expressed -
2 Sobic.005G098000 serpin domain containing protein, putative, expressed K13963: serpin B
3 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
4 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160
5 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
6 Sobic.003G425100 "Protein OSB3, chloroplastic/mitochondrial"(PubMedID : 24906815)@single-stranded DNA-binding protein, putative, expressed -
7 Sobic.004G027300 expressed protein -
8 Sobic.010G153300 protein phosphatase 2C, putative, expressed K17679: ATP-dependent RNA helicase MSS116, mitochondrial
9 Sobic.009G191500 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
10 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
12 Sobic.008G068100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
13 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
14 Sobic.010G097500 DNA polymerase lambda, putative, expressed K03512: DNA polymerase lambda
15 Sobic.005G088900 AGAP007117-PA, putative, expressed -
16 Sobic.002G112600 zinc finger family protein, putative, expressed -
17 Sobic.002G078100 PPR repeat domain containing protein, putative, expressed -
18 Sobic.001G373000 nucleoporin interacting component, putative, expressed K14309: NUP93, nuclear pore complex protein Nup93
19 Sobic.004G027400 - -
20 Sobic.001G024000 expressed protein K14844: pumilio homology domain family member 6


Gene co-expression network
sample Sobic006G206200 Sobic006G206200 Sobic002G043000 Sobic002G043000 Sobic006G206200--Sobic002G043000 Sobic005G098000 Sobic005G098000 Sobic006G206200--Sobic005G098000 Sobic004G215900 Sobic004G215900 Sobic006G206200--Sobic004G215900 Sobic004G038100 Sobic004G038100 Sobic006G206200--Sobic004G038100 Sobic008G111600 Sobic008G111600 Sobic006G206200--Sobic008G111600 Sobic003G425100 Sobic003G425100 Sobic006G206200--Sobic003G425100 Sobic004G027300 Sobic004G027300 Sobic006G206200--Sobic004G027300 Sobic010G153300 Sobic010G153300 Sobic006G206200--Sobic010G153300 Sobic009G191500 Sobic009G191500 Sobic006G206200--Sobic009G191500 Sobic002G043000--Sobic008G111600 Sobic002G043000--Sobic004G215900 Sobic002G426100 Sobic002G426100 Sobic002G043000--Sobic002G426100 Sobic006G236000 Sobic006G236000 Sobic002G043000--Sobic006G236000 Sobic008G068100 Sobic008G068100 Sobic002G043000--Sobic008G068100 Sobic006G181800 Sobic006G181800 Sobic002G043000--Sobic006G181800 Sobic002G043000--Sobic004G038100 Sobic006G280100 Sobic006G280100 Sobic002G043000--Sobic006G280100 Sobic004G129500 Sobic004G129500 Sobic002G043000--Sobic004G129500 Sobic010G161525 Sobic010G161525 Sobic005G098000--Sobic010G161525 Sobic005G098000--Sobic008G111600 Sobic003G144000 Sobic003G144000 Sobic005G098000--Sobic003G144000 Sobic005G098000--Sobic006G206200 Sobic003G412000 Sobic003G412000 Sobic005G098000--Sobic003G412000 Sobic003G432300 Sobic003G432300 Sobic005G098000--Sobic003G432300 Sobic003G130000 Sobic003G130000 Sobic005G098000--Sobic003G130000 Sobic005G088900 Sobic005G088900 Sobic005G098000--Sobic005G088900 Sobic010G038800 Sobic010G038800 Sobic005G098000--Sobic010G038800 Sobic004G215900--Sobic008G068100 Sobic004G215900--Sobic006G236000 Sobic004G215900--Sobic009G191500 Sobic002G003300 Sobic002G003300 Sobic004G215900--Sobic002G003300 Sobic001G024000 Sobic001G024000 Sobic004G215900--Sobic001G024000 Sobic004G215900--Sobic008G111600 Sobic004G215900--Sobic004G038100 Sobic002G112600 Sobic002G112600 Sobic004G215900--Sobic002G112600 Sobic004G215900--Sobic002G043000 Sobic006G033101 Sobic006G033101 Sobic004G038100--Sobic006G033101 Sobic004G038100--Sobic006G181800 Sobic001G373000 Sobic001G373000 Sobic004G038100--Sobic001G373000 Sobic004G038100--Sobic004G215900 Sobic010G188000 Sobic010G188000 Sobic004G038100--Sobic010G188000 Sobic003G259600 Sobic003G259600 Sobic004G038100--Sobic003G259600 Sobic001G373800 Sobic001G373800 Sobic004G038100--Sobic001G373800 Sobic004G038100--Sobic006G280100 Sobic009G104900 Sobic009G104900 Sobic004G038100--Sobic009G104900 Sobic008G111600--Sobic002G426100 Sobic008G111600--Sobic006G181800 Sobic002G362200 Sobic002G362200 Sobic008G111600--Sobic002G362200 Sobic008G111600--Sobic004G215900 Sobic008G111600--Sobic002G043000 Sobic008G111600--Sobic001G024000 Sobic002G078100 Sobic002G078100 Sobic008G111600--Sobic002G078100 Sobic008G111600--Sobic002G003300 Sobic008G111600--Sobic003G144000 Sobic009G163600 Sobic009G163600 Sobic003G425100--Sobic009G163600 Sobic005G028100 Sobic005G028100 Sobic003G425100--Sobic005G028100 Sobic003G425100--Sobic004G027300 Sobic006G225400 Sobic006G225400 Sobic003G425100--Sobic006G225400 Sobic010G224700 Sobic010G224700 Sobic003G425100--Sobic010G224700 Sobic009G071700 Sobic009G071700 Sobic003G425100--Sobic009G071700 Sobic003G436600 Sobic003G436600 Sobic003G425100--Sobic003G436600 Sobic006G198600 Sobic006G198600 Sobic003G425100--Sobic006G198600 Sobic004G036700 Sobic004G036700 Sobic003G425100--Sobic004G036700 Sobic004G151000 Sobic004G151000 Sobic004G027300--Sobic004G151000 Sobic001G049800 Sobic001G049800 Sobic004G027300--Sobic001G049800 Sobic004G027300--Sobic010G224700 Sobic007G060600 Sobic007G060600 Sobic004G027300--Sobic007G060600 Sobic002G378100 Sobic002G378100 Sobic004G027300--Sobic002G378100 Sobic004G027300--Sobic003G425100 Sobic001G453500 Sobic001G453500 Sobic004G027300--Sobic001G453500 Sobic007G059700 Sobic007G059700 Sobic004G027300--Sobic007G059700 Sobic004G027300--Sobic002G112600 Sobic010G153300--Sobic009G191500 Sobic010G153300--Sobic004G215900 Sobic010G097500 Sobic010G097500 Sobic010G153300--Sobic010G097500 Sobic010G153300--Sobic010G038800 Sobic010G153300--Sobic002G043000 Sobic010G153300--Sobic007G059700 Sobic010G153300--Sobic008G068100 Sobic010G153300--Sobic005G098000 Sobic010G153300--Sobic006G206200 Sobic009G191500--Sobic008G068100 Sobic009G191500--Sobic004G215900 Sobic001G483800 Sobic001G483800 Sobic009G191500--Sobic001G483800 Sobic005G079201 Sobic005G079201 Sobic009G191500--Sobic005G079201 Sobic009G191500--Sobic005G088900 Sobic009G191500--Sobic002G003300 Sobic009G191500--Sobic010G153300 Sobic009G191500--Sobic007G060600 Sobic003G336500 Sobic003G336500 Sobic009G191500--Sobic003G336500
Octagon: transcription factors


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