Gene annotation
Transcriptome id Sobic.005G098000.1
Synonym Sb05g008490
Functional annotation serpin domain containing protein, putative, expressed
UniProt C5Y1N3
Pfam PF00079
Panther DB PTHR11461 PTHR11461:SF189
NCBI CDD KOG2392; Serpin
KEGG Orthology K13963; serpin B
Gene Ontology GO:0005615; extracellular space


Orthologs (automatic annotation)
TAIR AT1G47710 : Serine protease inhibitor (SERPIN) family protein
RAP-DB (Rice) LOC_Os11g11500.1 : serpin domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029689
Brachypodium PNT63889 , PNT63888 , PNT63890
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G161525 - -
2 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
3 Sobic.003G144000 pentatricopeptide, putative, expressed -
4 Sobic.006G206200 - -
5 Sobic.003G412000 tRNA methyltransferase, putative, expressed K03256: TRM6, tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
6 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
7 Sobic.003G130000 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
8 Sobic.005G088900 AGAP007117-PA, putative, expressed -
9 Sobic.010G038800 NAP domain containing protein, putative, expressed K11279: NAP1L1, nucleosome assembly protein 1-like 1
10 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
11 Sobic.004G082700 PPR repeat containing protein, expressed -
12 Sobic.010G153300 protein phosphatase 2C, putative, expressed K17679: ATP-dependent RNA helicase MSS116, mitochondrial
13 Sobic.001G024000 expressed protein K14844: pumilio homology domain family member 6
14 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
15 Sobic.002G043000 HEN1, putative, expressed -
16 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
17 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
18 Sobic.002G362200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MSH-like DNA mismatch repair protein, putative, expressed K08735: DNA mismatch repair protein MSH2
19 Sobic.002G112600 zinc finger family protein, putative, expressed -
20 Sobic.004G038100 expressed protein K14303: NUP160, nuclear pore complex protein Nup160


Gene co-expression network
sample Sobic005G098000 Sobic005G098000 Sobic010G161525 Sobic010G161525 Sobic005G098000--Sobic010G161525 Sobic008G111600 Sobic008G111600 Sobic005G098000--Sobic008G111600 Sobic003G144000 Sobic003G144000 Sobic005G098000--Sobic003G144000 Sobic006G206200 Sobic006G206200 Sobic005G098000--Sobic006G206200 Sobic003G412000 Sobic003G412000 Sobic005G098000--Sobic003G412000 Sobic003G432300 Sobic003G432300 Sobic005G098000--Sobic003G432300 Sobic003G130000 Sobic003G130000 Sobic005G098000--Sobic003G130000 Sobic005G088900 Sobic005G088900 Sobic005G098000--Sobic005G088900 Sobic010G038800 Sobic010G038800 Sobic005G098000--Sobic010G038800 Sobic010G161525--Sobic005G098000 Sobic010G134100 Sobic010G134100 Sobic010G161525--Sobic010G134100 Sobic003G235700 Sobic003G235700 Sobic010G161525--Sobic003G235700 Sobic007G114000 Sobic007G114000 Sobic010G161525--Sobic007G114000 Sobic004G212100 Sobic004G212100 Sobic010G161525--Sobic004G212100 Sobic001G167500 Sobic001G167500 Sobic010G161525--Sobic001G167500 Sobic002G367800 Sobic002G367800 Sobic010G161525--Sobic002G367800 Sobic007G188600 Sobic007G188600 Sobic010G161525--Sobic007G188600 Sobic002G071100 Sobic002G071100 Sobic010G161525--Sobic002G071100 Sobic002G426100 Sobic002G426100 Sobic008G111600--Sobic002G426100 Sobic006G181800 Sobic006G181800 Sobic008G111600--Sobic006G181800 Sobic002G362200 Sobic002G362200 Sobic008G111600--Sobic002G362200 Sobic004G215900 Sobic004G215900 Sobic008G111600--Sobic004G215900 Sobic002G043000 Sobic002G043000 Sobic008G111600--Sobic002G043000 Sobic001G024000 Sobic001G024000 Sobic008G111600--Sobic001G024000 Sobic002G078100 Sobic002G078100 Sobic008G111600--Sobic002G078100 Sobic002G003300 Sobic002G003300 Sobic008G111600--Sobic002G003300 Sobic008G111600--Sobic003G144000 Sobic003G144000--Sobic005G088900 Sobic001G199500 Sobic001G199500 Sobic003G144000--Sobic001G199500 Sobic003G144000--Sobic010G038800 Sobic003G144000--Sobic008G111600 Sobic003G144000--Sobic003G432300 Sobic003G144000--Sobic005G098000 Sobic004G082700 Sobic004G082700 Sobic003G144000--Sobic004G082700 Sobic003G144000--Sobic006G181800 Sobic001G200200 Sobic001G200200 Sobic003G144000--Sobic001G200200 Sobic006G206200--Sobic002G043000 Sobic006G206200--Sobic005G098000 Sobic006G206200--Sobic004G215900 Sobic004G038100 Sobic004G038100 Sobic006G206200--Sobic004G038100 Sobic006G206200--Sobic008G111600 Sobic003G425100 Sobic003G425100 Sobic006G206200--Sobic003G425100 Sobic004G027300 Sobic004G027300 Sobic006G206200--Sobic004G027300 Sobic010G153300 Sobic010G153300 Sobic006G206200--Sobic010G153300 Sobic009G191500 Sobic009G191500 Sobic006G206200--Sobic009G191500 Sobic003G412000--Sobic001G024000 Sobic003G322200 Sobic003G322200 Sobic003G412000--Sobic003G322200 Sobic003G412000--Sobic005G098000 Sobic008G068100 Sobic008G068100 Sobic003G412000--Sobic008G068100 Sobic003G412000--Sobic008G111600 Sobic002G112600 Sobic002G112600 Sobic003G412000--Sobic002G112600 Sobic003G412000--Sobic010G038800 Sobic001G483800 Sobic001G483800 Sobic003G412000--Sobic001G483800 Sobic009G154900 Sobic009G154900 Sobic003G412000--Sobic009G154900 Sobic002G126800 Sobic002G126800 Sobic003G432300--Sobic002G126800 Sobic005G028100 Sobic005G028100 Sobic003G432300--Sobic005G028100 Sobic003G432300--Sobic005G088900 Sobic002G132600 Sobic002G132600 Sobic003G432300--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic003G432300--Sobic001G373000 Sobic003G432300--Sobic003G144000 Sobic008G000600 Sobic008G000600 Sobic003G432300--Sobic008G000600 Sobic003G432300--Sobic002G043000 Sobic003G432300--Sobic004G038100 Sobic009G041800 Sobic009G041800 Sobic003G130000--Sobic009G041800 Sobic003G130000--Sobic001G167500 Sobic003G130000--Sobic003G235700 Sobic003G130000--Sobic010G134100 Sobic006G251600 Sobic006G251600 Sobic003G130000--Sobic006G251600 Sobic003G205400 Sobic003G205400 Sobic003G130000--Sobic003G205400 Sobic003G008600 Sobic003G008600 Sobic003G130000--Sobic003G008600 Sobic003G130000--Sobic005G098000 Sobic001G268300 Sobic001G268300 Sobic003G130000--Sobic001G268300 Sobic005G088900--Sobic001G199500 Sobic005G088900--Sobic009G191500 Sobic009G176300 Sobic009G176300 Sobic005G088900--Sobic009G176300 Sobic005G088900--Sobic004G215900 Sobic005G088900--Sobic008G068100 Sobic005G088900--Sobic003G432300 Sobic005G088900--Sobic003G144000 Sobic002G133000 Sobic002G133000 Sobic005G088900--Sobic002G133000 Sobic005G088900--Sobic002G003300 Sobic010G038800--Sobic004G215900 Sobic010G038800--Sobic003G144000 Sobic010G038800--Sobic009G191500 Sobic010G038800--Sobic010G153300 Sobic001G408300 Sobic001G408300 Sobic010G038800--Sobic001G408300 Sobic001G372800 Sobic001G372800 Sobic010G038800--Sobic001G372800 Sobic010G038800--Sobic003G322200 Sobic003G123200 Sobic003G123200 Sobic010G038800--Sobic003G123200 Sobic010G038800--Sobic008G068100
Octagon: transcription factors


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