Gene annotation
Transcriptome id Sobic.008G000600.2
Synonym Sb08g000235
Functional annotation RNase P subunit p30, putative, expressed
UniProt A0A1B6PBC8
Pfam PF01876
Panther DB PTHR13031
NCBI CDD KOG2363; Protein subunit of nuclear ribonuclease P (RNase P)
KEGG Orthology K03539; RPP1, ribonuclease P/MRP protein subunit RPP1
Gene Ontology GO:0008033; tRNA processing GO:0004540ribonuclease activity


Orthologs (automatic annotation)
TAIR AT5G59980 : Polymerase/histidinol phosphatase-like
RAP-DB (Rice) LOC_Os12g01060.1 : RNase P subunit p30, putative, expressed
MaizeGDB (Corn) Zm00025a028906
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
2 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
3 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
4 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
5 Sobic.006G069100 pentatricopeptide, putative, expressed -
6 Sobic.010G099800 growth regulator related protein, putative, expressed -
7 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
9 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
10 Sobic.005G098000 serpin domain containing protein, putative, expressed K13963: serpin B
11 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
12 Sobic.005G000300 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
13 Sobic.003G130000 outer mitochondrial membrane porin, putative, expressed K11518: mitochondrial import receptor subunit TOM40
14 Sobic.007G030600 NOL1/NOP2/sun family protein, putative, expressed -
15 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
16 Sobic.001G242300 expressed protein -
17 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
18 Sobic.006G029400 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.004G282500 PPR repeat domain containing protein, putative, expressed -
20 Sobic.002G183300 GTP binding protein, putative, expressed -


Gene co-expression network
sample Sobic008G000600 Sobic008G000600 Sobic003G432300 Sobic003G432300 Sobic008G000600--Sobic003G432300 Sobic001G334100 Sobic001G334100 Sobic008G000600--Sobic001G334100 Sobic002G182000 Sobic002G182000 Sobic008G000600--Sobic002G182000 Sobic003G259600 Sobic003G259600 Sobic008G000600--Sobic003G259600 Sobic006G069100 Sobic006G069100 Sobic008G000600--Sobic006G069100 Sobic010G099800 Sobic010G099800 Sobic008G000600--Sobic010G099800 Sobic002G126800 Sobic002G126800 Sobic008G000600--Sobic002G126800 Sobic003G235700 Sobic003G235700 Sobic008G000600--Sobic003G235700 Sobic002G399900 Sobic002G399900 Sobic008G000600--Sobic002G399900 Sobic003G432300--Sobic002G126800 Sobic005G028100 Sobic005G028100 Sobic003G432300--Sobic005G028100 Sobic005G088900 Sobic005G088900 Sobic003G432300--Sobic005G088900 Sobic002G132600 Sobic002G132600 Sobic003G432300--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic003G432300--Sobic001G373000 Sobic003G144000 Sobic003G144000 Sobic003G432300--Sobic003G144000 Sobic003G432300--Sobic008G000600 Sobic002G043000 Sobic002G043000 Sobic003G432300--Sobic002G043000 Sobic004G038100 Sobic004G038100 Sobic003G432300--Sobic004G038100 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic005G000300 Sobic005G000300 Sobic001G334100--Sobic005G000300 Sobic009G063800 Sobic009G063800 Sobic002G182000--Sobic009G063800 Sobic002G182000--Sobic002G399900 Sobic001G343000 Sobic001G343000 Sobic002G182000--Sobic001G343000 Sobic001G203600 Sobic001G203600 Sobic002G182000--Sobic001G203600 Sobic007G146600 Sobic007G146600 Sobic002G182000--Sobic007G146600 Sobic003G130900 Sobic003G130900 Sobic002G182000--Sobic003G130900 Sobic002G066800 Sobic002G066800 Sobic002G182000--Sobic002G066800 Sobic010G172400 Sobic010G172400 Sobic002G182000--Sobic010G172400 Sobic003G113300 Sobic003G113300 Sobic002G182000--Sobic003G113300 Sobic003G361400 Sobic003G361400 Sobic003G259600--Sobic003G361400 Sobic003G360300 Sobic003G360300 Sobic003G259600--Sobic003G360300 Sobic003G259600--Sobic001G373000 Sobic003G331000 Sobic003G331000 Sobic003G259600--Sobic003G331000 Sobic003G259600--Sobic004G038100 Sobic010G269300 Sobic010G269300 Sobic003G259600--Sobic010G269300 Sobic003G028400 Sobic003G028400 Sobic003G259600--Sobic003G028400 Sobic002G142700 Sobic002G142700 Sobic003G259600--Sobic002G142700 Sobic003G259600--Sobic001G334100 Sobic004G241000 Sobic004G241000 Sobic006G069100--Sobic004G241000 Sobic004G256900 Sobic004G256900 Sobic006G069100--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G069100--Sobic010G068900 Sobic010G190900 Sobic010G190900 Sobic006G069100--Sobic010G190900 Sobic006G085900 Sobic006G085900 Sobic006G069100--Sobic006G085900 Sobic009G155400 Sobic009G155400 Sobic006G069100--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic006G069100--Sobic008G163400 Sobic009G116400 Sobic009G116400 Sobic006G069100--Sobic009G116400 Sobic004G025100 Sobic004G025100 Sobic006G069100--Sobic004G025100 Sobic001G393700 Sobic001G393700 Sobic010G099800--Sobic001G393700 Sobic003G240700 Sobic003G240700 Sobic010G099800--Sobic003G240700 Sobic001G474400 Sobic001G474400 Sobic010G099800--Sobic001G474400 Sobic009G045200 Sobic009G045200 Sobic010G099800--Sobic009G045200 Sobic003G405500 Sobic003G405500 Sobic010G099800--Sobic003G405500 Sobic010G278600 Sobic010G278600 Sobic010G099800--Sobic010G278600 Sobic001G335900 Sobic001G335900 Sobic010G099800--Sobic001G335900 Sobic001G051700 Sobic001G051700 Sobic010G099800--Sobic001G051700 Sobic002G430300 Sobic002G430300 Sobic010G099800--Sobic002G430300 Sobic002G126800--Sobic003G432300 Sobic002G126800--Sobic005G028100 Sobic002G126800--Sobic001G373000 Sobic009G104900 Sobic009G104900 Sobic002G126800--Sobic009G104900 Sobic002G126800--Sobic002G132600 Sobic002G155100 Sobic002G155100 Sobic002G126800--Sobic002G155100 Sobic006G033101 Sobic006G033101 Sobic002G126800--Sobic006G033101 Sobic007G069700 Sobic007G069700 Sobic002G126800--Sobic007G069700 Sobic002G126800--Sobic005G088900 Sobic003G130000 Sobic003G130000 Sobic003G235700--Sobic003G130000 Sobic009G176300 Sobic009G176300 Sobic003G235700--Sobic009G176300 Sobic005G098000 Sobic005G098000 Sobic003G235700--Sobic005G098000 Sobic007G140100 Sobic007G140100 Sobic003G235700--Sobic007G140100 Sobic003G235700--Sobic008G163400 Sobic003G235700--Sobic003G144000 Sobic003G235700--Sobic005G088900 Sobic010G161525 Sobic010G161525 Sobic003G235700--Sobic010G161525 Sobic001G268300 Sobic001G268300 Sobic003G235700--Sobic001G268300 Sobic006G265600 Sobic006G265600 Sobic002G399900--Sobic006G265600 Sobic002G399900--Sobic010G172400 Sobic002G399900--Sobic002G182000 Sobic002G399900--Sobic002G142700 Sobic003G222700 Sobic003G222700 Sobic002G399900--Sobic003G222700 Sobic001G115500 Sobic001G115500 Sobic002G399900--Sobic001G115500 Sobic002G399900--Sobic001G474400 Sobic001G123600 Sobic001G123600 Sobic002G399900--Sobic001G123600 Sobic001G507200 Sobic001G507200 Sobic002G399900--Sobic001G507200
Octagon: transcription factors


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