Gene annotation
Transcriptome id Sobic.007G030600.3,Sobic.007G030600.2,Sobic.007G030600.1,Sobic.007G030600.4
Synonym Sb07g002670
Functional annotation NOL1/NOP2/sun family protein, putative, expressed
UniProt A0A1B6PFB1 , A0A1Z5R7X9 , C5YMY7 , Q8W0S4 , A0A097PSH7 , A0A1Z5R8D3
Pfam PF01189
Panther DB PTHR22807 PTHR22807:SF16
NCBI CDD KOG2198; tRNA cytosine-5-methylases and related enzymes of the NOL1/NOP2/sun superfamily
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G66180 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g21510.2,LOC_Os02g21510.3,LOC_Os02g21510.1 : NOL1/NOP2/sun family protein, putative, expressed
MaizeGDB (Corn) Zm00025a055285
Brachypodium KQJ94964 , KQJ94965 , KQJ94966 , KQJ94968 , KQJ94969 , KQJ94967 , KQJ94971 , KQJ94970 , PNT66590
Barley HORVU7Hr1G073570.3 , HORVU7Hr1G073570.2 , HORVU7Hr1G073570.1 , HORVU7Hr1G073570.7 , HORVU7Hr1G073570.6 , HORVU7Hr1G073570.5 , HORVU7Hr1G073570.4
Wheat TraesCS7A02G309200 , TraesCS7A02G309200 , TraesCS7D02G305900 , TraesCS7B02G209200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
2 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
3 Sobic.008G039000 expressed protein -
4 Sobic.007G146600 conserved oligomeric Golgi complex component 3, putative, expressed -
5 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
6 Sobic.002G399900 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.003G113900 zinc finger matrin-type protein 5, putative, expressed K13152: U11/U12 small nuclear ribonucleoprotein 20 kDa protein
8 Sobic.001G413100 nucleotide binding protein, putative, expressed -
9 Sobic.001G343000 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
10 Sobic.007G016900 OsFBL26 - F-box domain and LRR containing protein, expressed -
11 Sobic.005G178700 OsFBX135 - F-box domain containing protein, expressed -
12 Sobic.004G353400 leucine-rich repeat-containing protein 40, putative, expressed -
13 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
14 Sobic.008G000600 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
15 Sobic.007G143500 splicing factor 3B subunit 5, putative, expressed K12832: SF3B5, splicing factor 3B subunit 5
16 Sobic.007G053400 nuclear matrix protein 1, putative, expressed -
17 Sobic.003G211700 expressed protein -
18 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
19 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
20 Sobic.007G036800 xylosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic007G030600 Sobic007G030600 Sobic003G113400 Sobic003G113400 Sobic007G030600--Sobic003G113400 Sobic003G028400 Sobic003G028400 Sobic007G030600--Sobic003G028400 Sobic008G039000 Sobic008G039000 Sobic007G030600--Sobic008G039000 Sobic007G146600 Sobic007G146600 Sobic007G030600--Sobic007G146600 Sobic002G182000 Sobic002G182000 Sobic007G030600--Sobic002G182000 Sobic002G399900 Sobic002G399900 Sobic007G030600--Sobic002G399900 Sobic003G113900 Sobic003G113900 Sobic007G030600--Sobic003G113900 Sobic001G413100 Sobic001G413100 Sobic007G030600--Sobic001G413100 Sobic001G343000 Sobic001G343000 Sobic007G030600--Sobic001G343000 Sobic003G167000 Sobic003G167000 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic001G203600 Sobic001G203600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic004G129500 Sobic004G129500 Sobic003G028400--Sobic004G129500 Sobic003G331000 Sobic003G331000 Sobic003G028400--Sobic003G331000 Sobic003G259600 Sobic003G259600 Sobic003G028400--Sobic003G259600 Sobic001G123600 Sobic001G123600 Sobic003G028400--Sobic001G123600 Sobic007G031300 Sobic007G031300 Sobic003G028400--Sobic007G031300 Sobic002G123600 Sobic002G123600 Sobic003G028400--Sobic002G123600 Sobic001G465500 Sobic001G465500 Sobic003G028400--Sobic001G465500 Sobic003G028400--Sobic007G030600 Sobic001G242300 Sobic001G242300 Sobic003G028400--Sobic001G242300 Sobic008G039000--Sobic001G052100 Sobic008G039000--Sobic003G113400 Sobic009G227100 Sobic009G227100 Sobic008G039000--Sobic009G227100 Sobic008G039000--Sobic007G030600 Sobic009G047700 Sobic009G047700 Sobic008G039000--Sobic009G047700 Sobic009G116400 Sobic009G116400 Sobic008G039000--Sobic009G116400 Sobic005G123400 Sobic005G123400 Sobic008G039000--Sobic005G123400 Sobic007G087900 Sobic007G087900 Sobic008G039000--Sobic007G087900 Sobic006G262800 Sobic006G262800 Sobic008G039000--Sobic006G262800 Sobic007G148400 Sobic007G148400 Sobic007G146600--Sobic007G148400 Sobic007G146600--Sobic001G343000 Sobic006G222500 Sobic006G222500 Sobic007G146600--Sobic006G222500 Sobic009G063800 Sobic009G063800 Sobic007G146600--Sobic009G063800 Sobic007G146600--Sobic002G182000 Sobic003G150900 Sobic003G150900 Sobic007G146600--Sobic003G150900 Sobic003G393200 Sobic003G393200 Sobic007G146600--Sobic003G393200 Sobic005G114800 Sobic005G114800 Sobic007G146600--Sobic005G114800 Sobic007G146600--Sobic010G250000 Sobic002G182000--Sobic009G063800 Sobic002G182000--Sobic002G399900 Sobic002G182000--Sobic001G343000 Sobic002G182000--Sobic001G203600 Sobic002G182000--Sobic007G146600 Sobic003G130900 Sobic003G130900 Sobic002G182000--Sobic003G130900 Sobic002G066800 Sobic002G066800 Sobic002G182000--Sobic002G066800 Sobic010G172400 Sobic010G172400 Sobic002G182000--Sobic010G172400 Sobic003G113300 Sobic003G113300 Sobic002G182000--Sobic003G113300 Sobic006G265600 Sobic006G265600 Sobic002G399900--Sobic006G265600 Sobic002G399900--Sobic010G172400 Sobic002G399900--Sobic002G182000 Sobic002G142700 Sobic002G142700 Sobic002G399900--Sobic002G142700 Sobic003G222700 Sobic003G222700 Sobic002G399900--Sobic003G222700 Sobic001G115500 Sobic001G115500 Sobic002G399900--Sobic001G115500 Sobic001G474400 Sobic001G474400 Sobic002G399900--Sobic001G474400 Sobic002G399900--Sobic001G123600 Sobic001G507200 Sobic001G507200 Sobic002G399900--Sobic001G507200 Sobic003G113900--Sobic002G399900 Sobic007G036800 Sobic007G036800 Sobic003G113900--Sobic007G036800 Sobic003G113900--Sobic003G028400 Sobic010G059700 Sobic010G059700 Sobic003G113900--Sobic010G059700 Sobic003G113900--Sobic007G030600 Sobic007G072100 Sobic007G072100 Sobic003G113900--Sobic007G072100 Sobic003G113900--Sobic004G129500 Sobic007G167800 Sobic007G167800 Sobic003G113900--Sobic007G167800 Sobic006G127500 Sobic006G127500 Sobic003G113900--Sobic006G127500 Sobic010G134100 Sobic010G134100 Sobic001G413100--Sobic010G134100 Sobic001G167500 Sobic001G167500 Sobic001G413100--Sobic001G167500 Sobic001G413100--Sobic009G041800 Sobic008G084100 Sobic008G084100 Sobic001G413100--Sobic008G084100 Sobic004G069400 Sobic004G069400 Sobic001G413100--Sobic004G069400 Sobic001G176900 Sobic001G176900 Sobic001G413100--Sobic001G176900 Sobic002G304400 Sobic002G304400 Sobic001G413100--Sobic002G304400 Sobic003G388900 Sobic003G388900 Sobic001G413100--Sobic003G388900 Sobic003G388700 Sobic003G388700 Sobic001G413100--Sobic003G388700 Sobic001G343000--Sobic007G146600 Sobic001G343000--Sobic003G393200 Sobic007G048700 Sobic007G048700 Sobic001G343000--Sobic007G048700 Sobic001G343000--Sobic002G182000 Sobic007G030100 Sobic007G030100 Sobic001G343000--Sobic007G030100 Sobic010G028400 Sobic010G028400 Sobic001G343000--Sobic010G028400 Sobic002G070300 Sobic002G070300 Sobic001G343000--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic001G343000--Sobic008G132200 Sobic001G012900 Sobic001G012900 Sobic001G343000--Sobic001G012900
Octagon: transcription factors


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