Gene annotation
Transcriptome id Sobic.008G039000.1
Synonym Sb08g003360
Functional annotation expressed protein
UniProt C5YS32
Pfam PF09597
Panther DB PTHR34955
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G26800 : -
RAP-DB (Rice) LOC_Os10g05940.1 : expressed protein
MaizeGDB (Corn) Zm00025a036117
Brachypodium KQK04068
Barley -
Wheat TraesCS4B02G047200 , TraesCS3B02G173000
Populus -


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cDNA sequences
Sobic.008G039000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G052100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -
2 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
3 Sobic.009G227100 expressed protein -
4 Sobic.007G030600 NOL1/NOP2/sun family protein, putative, expressed -
5 Sobic.009G047700 E3 ubiquitin-protein ligase SINA-like 2, putative, expressed -
6 Sobic.009G116400 pentatricopeptide, putative, expressed -
7 Sobic.005G123400 expressed protein -
8 Sobic.007G087900 Rf1, mitochondrial precursor, putative, expressed -
9 Sobic.006G262800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
11 Sobic.004G334200 ribosomal protein S15 containing protein, expressed -
12 Sobic.007G070300 OsFBL41 - F-box domain and LRR containing protein, expressed -
13 Sobic.010G123700 expressed protein -
14 Sobic.010G209700 expressed protein -
15 Sobic.010G190900 pentatricopeptide, putative, expressed -
16 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
17 Sobic.007G140100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
18 Sobic.004G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
19 Sobic.010G112600 integral membrane protein, putative, expressed -
20 Sobic.003G445200 - -


Gene co-expression network
sample Sobic008G039000 Sobic008G039000 Sobic001G052100 Sobic001G052100 Sobic008G039000--Sobic001G052100 Sobic003G113400 Sobic003G113400 Sobic008G039000--Sobic003G113400 Sobic009G227100 Sobic009G227100 Sobic008G039000--Sobic009G227100 Sobic007G030600 Sobic007G030600 Sobic008G039000--Sobic007G030600 Sobic009G047700 Sobic009G047700 Sobic008G039000--Sobic009G047700 Sobic009G116400 Sobic009G116400 Sobic008G039000--Sobic009G116400 Sobic005G123400 Sobic005G123400 Sobic008G039000--Sobic005G123400 Sobic007G087900 Sobic007G087900 Sobic008G039000--Sobic007G087900 Sobic006G262800 Sobic006G262800 Sobic008G039000--Sobic006G262800 Sobic001G052100--Sobic005G123400 Sobic001G052100--Sobic008G039000 Sobic001G203600 Sobic001G203600 Sobic001G052100--Sobic001G203600 Sobic010G112600 Sobic010G112600 Sobic001G052100--Sobic010G112600 Sobic006G237500 Sobic006G237500 Sobic001G052100--Sobic006G237500 Sobic001G052100--Sobic006G262800 Sobic001G052100--Sobic009G227100 Sobic001G478900 Sobic001G478900 Sobic001G052100--Sobic001G478900 Sobic008G095900 Sobic008G095900 Sobic001G052100--Sobic008G095900 Sobic003G167000 Sobic003G167000 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic003G113400--Sobic001G052100 Sobic009G227100--Sobic005G123400 Sobic001G043200 Sobic001G043200 Sobic009G227100--Sobic001G043200 Sobic009G199500 Sobic009G199500 Sobic009G227100--Sobic009G199500 Sobic006G220400 Sobic006G220400 Sobic009G227100--Sobic006G220400 Sobic009G252300 Sobic009G252300 Sobic009G227100--Sobic009G252300 Sobic009G227100--Sobic001G052100 Sobic009G227100--Sobic004G334200 Sobic003G190200 Sobic003G190200 Sobic009G227100--Sobic003G190200 Sobic009G227100--Sobic010G112600 Sobic007G030600--Sobic003G113400 Sobic003G028400 Sobic003G028400 Sobic007G030600--Sobic003G028400 Sobic007G030600--Sobic008G039000 Sobic007G146600 Sobic007G146600 Sobic007G030600--Sobic007G146600 Sobic002G182000 Sobic002G182000 Sobic007G030600--Sobic002G182000 Sobic002G399900 Sobic002G399900 Sobic007G030600--Sobic002G399900 Sobic003G113900 Sobic003G113900 Sobic007G030600--Sobic003G113900 Sobic001G413100 Sobic001G413100 Sobic007G030600--Sobic001G413100 Sobic001G343000 Sobic001G343000 Sobic007G030600--Sobic001G343000 Sobic009G047700--Sobic001G478900 Sobic003G091600 Sobic003G091600 Sobic009G047700--Sobic003G091600 Sobic009G047700--Sobic001G052100 Sobic007G106600 Sobic007G106600 Sobic009G047700--Sobic007G106600 Sobic009G047700--Sobic009G227100 Sobic009G047700--Sobic005G123400 Sobic001G529500 Sobic001G529500 Sobic009G047700--Sobic001G529500 Sobic004G189000 Sobic004G189000 Sobic009G047700--Sobic004G189000 Sobic004G051600 Sobic004G051600 Sobic009G047700--Sobic004G051600 Sobic009G155400 Sobic009G155400 Sobic009G116400--Sobic009G155400 Sobic006G262700 Sobic006G262700 Sobic009G116400--Sobic006G262700 Sobic008G163400 Sobic008G163400 Sobic009G116400--Sobic008G163400 Sobic010G190900 Sobic010G190900 Sobic009G116400--Sobic010G190900 Sobic009G116400--Sobic007G087900 Sobic006G069100 Sobic006G069100 Sobic009G116400--Sobic006G069100 Sobic005G210700 Sobic005G210700 Sobic009G116400--Sobic005G210700 Sobic004G346200 Sobic004G346200 Sobic009G116400--Sobic004G346200 Sobic004G241000 Sobic004G241000 Sobic009G116400--Sobic004G241000 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic007G030100 Sobic007G030100 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic007G087900--Sobic009G116400 Sobic007G087900--Sobic006G069100 Sobic007G087900--Sobic010G190900 Sobic010G068900 Sobic010G068900 Sobic007G087900--Sobic010G068900 Sobic007G087900--Sobic006G262700 Sobic006G085900 Sobic006G085900 Sobic007G087900--Sobic006G085900 Sobic007G087900--Sobic004G241000 Sobic007G087900--Sobic006G262800 Sobic004G256900 Sobic004G256900 Sobic007G087900--Sobic004G256900 Sobic006G262800--Sobic010G068900 Sobic009G154900 Sobic009G154900 Sobic006G262800--Sobic009G154900 Sobic006G262800--Sobic001G478900 Sobic006G262800--Sobic004G256900 Sobic002G172500 Sobic002G172500 Sobic006G262800--Sobic002G172500 Sobic006G262800--Sobic008G163400 Sobic006G262800--Sobic001G052100 Sobic001G268300 Sobic001G268300 Sobic006G262800--Sobic001G268300 Sobic006G262800--Sobic004G241000
Octagon: transcription factors


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