Gene annotation
Transcriptome id Sobic.003G445200.1
Synonym Sb03g047460
Functional annotation -
UniProt C5XJF2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39500 : -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium PNT73692 , KQK11798
Barley HORVU3Hr1G116700.11 , HORVU3Hr1G116700.12 , HORVU3Hr1G116700.13 , HORVU3Hr1G116630.2 , HORVU3Hr1G116630.1 , HORVU3Hr1G116700.2 , HORVU3Hr1G116700.3 , HORVU3Hr1G116700.1 , HORVU3Hr1G116700.6 , HORVU3Hr1G116700.4 , HORVU3Hr1G116700.5 , HORVU3Hr1G116700.8
Wheat TraesCS3D02G539800 , TraesCS3B02G611400 , TraesCS3A02G534400 , TraesCS3D02G540300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
2 Sobic.009G227100 expressed protein -
3 Sobic.002G398500 Mo25, putative, expressed K08272: CAB39, calcium binding protein 39
4 Sobic.006G103700 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
5 Sobic.006G220400 exonuclease, putative, expressed -
6 Sobic.001G043200 expressed protein -
7 Sobic.005G123400 expressed protein -
8 Sobic.007G158900 expressed protein -
9 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
10 Sobic.004G334200 ribosomal protein S15 containing protein, expressed -
11 Sobic.009G059400 expressed protein -
12 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
13 Sobic.003G393200 expressed protein -
14 Sobic.001G143900 expressed protein -
15 Sobic.003G120700 glycosyl transferase, group 1 domain containing protein, expressed -
16 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
17 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
18 Sobic.003G167000 protein phosphotase protein, putative, expressed -
19 Sobic.005G009100 OsFBX184 - F-box domain containing protein, expressed -
20 Sobic.001G521700 - -


Gene co-expression network
sample Sobic003G445200 Sobic003G445200 Sobic009G199500 Sobic009G199500 Sobic003G445200--Sobic009G199500 Sobic009G227100 Sobic009G227100 Sobic003G445200--Sobic009G227100 Sobic002G398500 Sobic002G398500 Sobic003G445200--Sobic002G398500 Sobic006G103700 Sobic006G103700 Sobic003G445200--Sobic006G103700 Sobic006G220400 Sobic006G220400 Sobic003G445200--Sobic006G220400 Sobic001G043200 Sobic001G043200 Sobic003G445200--Sobic001G043200 Sobic005G123400 Sobic005G123400 Sobic003G445200--Sobic005G123400 Sobic007G158900 Sobic007G158900 Sobic003G445200--Sobic007G158900 Sobic003G113400 Sobic003G113400 Sobic003G445200--Sobic003G113400 Sobic009G199500--Sobic007G158900 Sobic009G199500--Sobic009G227100 Sobic009G199500--Sobic003G445200 Sobic002G299100 Sobic002G299100 Sobic009G199500--Sobic002G299100 Sobic002G131400 Sobic002G131400 Sobic009G199500--Sobic002G131400 Sobic004G122900 Sobic004G122900 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic009G199500--Sobic001G043200 Sobic009G199500--Sobic002G398500 Sobic009G227100--Sobic005G123400 Sobic009G227100--Sobic001G043200 Sobic009G227100--Sobic009G199500 Sobic009G227100--Sobic006G220400 Sobic009G252300 Sobic009G252300 Sobic009G227100--Sobic009G252300 Sobic001G052100 Sobic001G052100 Sobic009G227100--Sobic001G052100 Sobic004G334200 Sobic004G334200 Sobic009G227100--Sobic004G334200 Sobic003G190200 Sobic003G190200 Sobic009G227100--Sobic003G190200 Sobic010G112600 Sobic010G112600 Sobic009G227100--Sobic010G112600 Sobic002G398500--Sobic001G043200 Sobic002G398500--Sobic009G199500 Sobic001G474400 Sobic001G474400 Sobic002G398500--Sobic001G474400 Sobic001G343000 Sobic001G343000 Sobic002G398500--Sobic001G343000 Sobic002G398500--Sobic002G131400 Sobic003G113300 Sobic003G113300 Sobic002G398500--Sobic003G113300 Sobic010G172400 Sobic010G172400 Sobic002G398500--Sobic010G172400 Sobic002G398500--Sobic003G445200 Sobic002G398500--Sobic006G103700 Sobic006G103700--Sobic006G220400 Sobic006G103700--Sobic003G113300 Sobic006G170900 Sobic006G170900 Sobic006G103700--Sobic006G170900 Sobic006G103700--Sobic004G122900 Sobic004G060300 Sobic004G060300 Sobic006G103700--Sobic004G060300 Sobic006G103700--Sobic001G043200 Sobic001G335000 Sobic001G335000 Sobic006G103700--Sobic001G335000 Sobic007G030100 Sobic007G030100 Sobic006G103700--Sobic007G030100 Sobic001G521700 Sobic001G521700 Sobic006G103700--Sobic001G521700 Sobic006G220400--Sobic001G043200 Sobic006G220400--Sobic005G123400 Sobic006G220400--Sobic009G227100 Sobic006G012300 Sobic006G012300 Sobic006G220400--Sobic006G012300 Sobic001G203600 Sobic001G203600 Sobic006G220400--Sobic001G203600 Sobic006G220400--Sobic006G103700 Sobic007G204000 Sobic007G204000 Sobic006G220400--Sobic007G204000 Sobic004G194100 Sobic004G194100 Sobic006G220400--Sobic004G194100 Sobic006G220400--Sobic004G334200 Sobic001G043200--Sobic005G123400 Sobic001G043200--Sobic003G190200 Sobic003G021600 Sobic003G021600 Sobic001G043200--Sobic003G021600 Sobic003G394500 Sobic003G394500 Sobic001G043200--Sobic003G394500 Sobic009G122500 Sobic009G122500 Sobic001G043200--Sobic009G122500 Sobic001G043200--Sobic007G030100 Sobic001G043200--Sobic004G122900 Sobic009G154900 Sobic009G154900 Sobic001G043200--Sobic009G154900 Sobic003G194800 Sobic003G194800 Sobic001G043200--Sobic003G194800 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic007G158900--Sobic009G199500 Sobic010G181600 Sobic010G181600 Sobic007G158900--Sobic010G181600 Sobic007G192400 Sobic007G192400 Sobic007G158900--Sobic007G192400 Sobic009G059400 Sobic009G059400 Sobic007G158900--Sobic009G059400 Sobic002G023100 Sobic002G023100 Sobic007G158900--Sobic002G023100 Sobic001G017200 Sobic001G017200 Sobic007G158900--Sobic001G017200 Sobic007G218600 Sobic007G218600 Sobic007G158900--Sobic007G218600 Sobic004G218300 Sobic004G218300 Sobic007G158900--Sobic004G218300 Sobic008G006000 Sobic008G006000 Sobic007G158900--Sobic008G006000 Sobic003G167000 Sobic003G167000 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic003G113400--Sobic001G052100
Octagon: transcription factors


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