Gene annotation
Transcriptome id Sobic.001G143900.3
Synonym Sb01g012550
Functional annotation expressed protein
UniProt A0A1Z5S5L2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56210 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os03g46310.1 : expressed protein
MaizeGDB (Corn) Zm00025a009194
Brachypodium KQK13859
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G213900 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
2 Sobic.003G396800 expressed protein K17413: small subunit ribosomal protein S35
3 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
4 Sobic.001G280500 abscisic acid insensitive 8, putative, expressed -
5 Sobic.003G004800 ATP binding protein, putative, expressed -
6 Sobic.002G414800 PPR repeat domain containing protein, putative, expressed -
7 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
8 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
9 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
10 Sobic.008G022400 EMB2748, putative, expressed -
11 Sobic.001G282200 ribosomal protein L35, putative, expressed -
12 Sobic.003G120700 glycosyl transferase, group 1 domain containing protein, expressed -
13 Sobic.009G156800 expressed protein -
14 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.001G356200 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
16 Sobic.003G349900 50S ribosomal protein L17, putative, expressed K02879: RP-L17, MRPL17, large subunit ribosomal protein L17
17 Sobic.001G498800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
18 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
19 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
20 Sobic.002G392400 expressed protein -


Gene co-expression network
sample Sobic001G143900 Sobic001G143900 Sobic002G213900 Sobic002G213900 Sobic001G143900--Sobic002G213900 Sobic003G396800 Sobic003G396800 Sobic001G143900--Sobic003G396800 Sobic002G397900 Sobic002G397900 Sobic001G143900--Sobic002G397900 Sobic001G280500 Sobic001G280500 Sobic001G143900--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic001G143900--Sobic003G004800 Sobic002G414800 Sobic002G414800 Sobic001G143900--Sobic002G414800 Sobic003G260600 Sobic003G260600 Sobic001G143900--Sobic003G260600 Sobic010G086300 Sobic010G086300 Sobic001G143900--Sobic010G086300 Sobic002G348400 Sobic002G348400 Sobic001G143900--Sobic002G348400 Sobic006G134500 Sobic006G134500 Sobic002G213900--Sobic006G134500 Sobic001G384200 Sobic001G384200 Sobic002G213900--Sobic001G384200 Sobic009G178400 Sobic009G178400 Sobic002G213900--Sobic009G178400 Sobic003G385300 Sobic003G385300 Sobic002G213900--Sobic003G385300 Sobic004G113600 Sobic004G113600 Sobic002G213900--Sobic004G113600 Sobic001G387300 Sobic001G387300 Sobic002G213900--Sobic001G387300 Sobic008G166100 Sobic008G166100 Sobic002G213900--Sobic008G166100 Sobic002G389600 Sobic002G389600 Sobic002G213900--Sobic002G389600 Sobic006G265800 Sobic006G265800 Sobic002G213900--Sobic006G265800 Sobic003G396800--Sobic001G143900 Sobic009G228600 Sobic009G228600 Sobic003G396800--Sobic009G228600 Sobic009G063800 Sobic009G063800 Sobic003G396800--Sobic009G063800 Sobic002G182000 Sobic002G182000 Sobic003G396800--Sobic002G182000 Sobic003G120700 Sobic003G120700 Sobic003G396800--Sobic003G120700 Sobic001G203600 Sobic001G203600 Sobic003G396800--Sobic001G203600 Sobic001G033600 Sobic001G033600 Sobic003G396800--Sobic001G033600 Sobic002G193500 Sobic002G193500 Sobic003G396800--Sobic002G193500 Sobic003G396800--Sobic003G004800 Sobic003G349900 Sobic003G349900 Sobic002G397900--Sobic003G349900 Sobic002G397900--Sobic001G280500 Sobic003G089100 Sobic003G089100 Sobic002G397900--Sobic003G089100 Sobic004G074600 Sobic004G074600 Sobic002G397900--Sobic004G074600 Sobic002G397900--Sobic002G213900 Sobic002G397900--Sobic002G414800 Sobic002G054700 Sobic002G054700 Sobic002G397900--Sobic002G054700 Sobic001G356200 Sobic001G356200 Sobic002G397900--Sobic001G356200 Sobic003G201500 Sobic003G201500 Sobic002G397900--Sobic003G201500 Sobic001G280500--Sobic002G414800 Sobic001G149000 Sobic001G149000 Sobic001G280500--Sobic001G149000 Sobic005G063200 Sobic005G063200 Sobic001G280500--Sobic005G063200 Sobic001G280500--Sobic001G384200 Sobic001G280500--Sobic008G166100 Sobic008G022400 Sobic008G022400 Sobic001G280500--Sobic008G022400 Sobic010G160300 Sobic010G160300 Sobic001G280500--Sobic010G160300 Sobic001G424800 Sobic001G424800 Sobic001G280500--Sobic001G424800 Sobic001G280500--Sobic006G265800 Sobic007G086600 Sobic007G086600 Sobic003G004800--Sobic007G086600 Sobic003G004800--Sobic006G265800 Sobic001G385300 Sobic001G385300 Sobic003G004800--Sobic001G385300 Sobic001G076600 Sobic001G076600 Sobic003G004800--Sobic001G076600 Sobic003G293400 Sobic003G293400 Sobic003G004800--Sobic003G293400 Sobic010G153400 Sobic010G153400 Sobic003G004800--Sobic010G153400 Sobic001G308500 Sobic001G308500 Sobic003G004800--Sobic001G308500 Sobic001G117900 Sobic001G117900 Sobic003G004800--Sobic001G117900 Sobic005G060100 Sobic005G060100 Sobic003G004800--Sobic005G060100 Sobic002G414800--Sobic001G384200 Sobic002G414800--Sobic008G166100 Sobic002G414800--Sobic001G280500 Sobic002G414800--Sobic006G265800 Sobic002G414800--Sobic006G134500 Sobic001G400000 Sobic001G400000 Sobic002G414800--Sobic001G400000 Sobic004G007400 Sobic004G007400 Sobic002G414800--Sobic004G007400 Sobic002G414800--Sobic001G387300 Sobic002G362500 Sobic002G362500 Sobic002G414800--Sobic002G362500 Sobic002G255400 Sobic002G255400 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700 Sobic001G385000 Sobic001G385000 Sobic010G086300--Sobic001G385000 Sobic006G232800 Sobic006G232800 Sobic010G086300--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic010G086300--Sobic003G394500 Sobic010G086300--Sobic001G149000 Sobic010G086300--Sobic008G022400 Sobic009G025700 Sobic009G025700 Sobic010G086300--Sobic009G025700 Sobic010G086300--Sobic002G362500 Sobic006G191000 Sobic006G191000 Sobic010G086300--Sobic006G191000 Sobic009G046900 Sobic009G046900 Sobic010G086300--Sobic009G046900 Sobic002G348400--Sobic010G153400 Sobic002G392400 Sobic002G392400 Sobic002G348400--Sobic002G392400 Sobic002G348400--Sobic007G086600 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic001G309200 Sobic001G309200 Sobic002G348400--Sobic001G309200 Sobic002G348400--Sobic001G280500 Sobic002G348400--Sobic003G004800 Sobic001G188000 Sobic001G188000 Sobic002G348400--Sobic001G188000
Octagon: transcription factors


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