Gene annotation
Transcriptome id Sobic.005G009100.1,Sobic.005G009100.2,Sobic.005G009100.3
Synonym Sb05g000850
Functional annotation OsFBX184 - F-box domain containing protein, expressed
UniProt A0A1Z5RGI7 , A0A1Z5RG48 , C5Y334
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G42770 : F-box/RNI-like superfamily protein,F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os06g04710.1,LOC_Os06g04690.1 : expressed protein,OsFBX184 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQK16921 , KQK16922 , PNT75388 , KQJ86197 , KQJ86199 , PNT75389 , PNT62473
Barley -
Wheat TraesCS5A02G274900 , TraesCS1B02G067400 , TraesCS1D02G345000 , TraesCS4B02G306800 , TraesCS1B02G356000 , TraesCS4D02G304800 , TraesCS5B02G274700
Populus -


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cDNA sequences
Sobic.005G009100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G141400 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
2 Sobic.004G122900 gamma-secretase subunit APH-1B, putative, expressed -
3 Sobic.002G147200 esterase/lipase/thioesterase, putative, expressed -
4 Sobic.009G199500 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
5 Sobic.004G042900 VIL2 protein, putative, expressed -
6 Sobic.007G192400 zinc ion binding protein, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
7 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
8 Sobic.005G123400 expressed protein -
9 Sobic.007G030100 galactosyltransferase family protein, putative, expressed -
10 Sobic.004G259300 Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed K15687: E3 ubiquitin-protein ligase makorin
11 Sobic.007G147400 - -
12 Sobic.009G059400 expressed protein -
13 Sobic.004G180900 PSP domain containing protein, expressed K13128: zinc finger CCHC domain-containing protein 8
14 Sobic.001G521700 - -
15 Sobic.001G475300 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K11842: ubiquitin carboxyl-terminal hydrolase 12/46
16 Sobic.002G203600 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
17 Sobic.003G190200 Sec1 family transport protein, putative, expressed -
18 Sobic.006G103700 tRNA synthetase, putative, expressed K01866: YARS, tyrosyl-tRNA synthetase
19 Sobic.008G006000 expressed protein -
20 Sobic.009G107300 3\'-5\' exonuclease, putative, expressed -


Gene co-expression network
sample Sobic005G009100 Sobic005G009100 Sobic001G141400 Sobic001G141400 Sobic005G009100--Sobic001G141400 Sobic004G122900 Sobic004G122900 Sobic005G009100--Sobic004G122900 Sobic002G147200 Sobic002G147200 Sobic005G009100--Sobic002G147200 Sobic009G199500 Sobic009G199500 Sobic005G009100--Sobic009G199500 Sobic004G042900 Sobic004G042900 Sobic005G009100--Sobic004G042900 Sobic007G192400 Sobic007G192400 Sobic005G009100--Sobic007G192400 Sobic010G181600 Sobic010G181600 Sobic005G009100--Sobic010G181600 Sobic005G123400 Sobic005G123400 Sobic005G009100--Sobic005G123400 Sobic007G030100 Sobic007G030100 Sobic005G009100--Sobic007G030100 Sobic001G475300 Sobic001G475300 Sobic001G141400--Sobic001G475300 Sobic009G252300 Sobic009G252300 Sobic001G141400--Sobic009G252300 Sobic003G250400 Sobic003G250400 Sobic001G141400--Sobic003G250400 Sobic009G194000 Sobic009G194000 Sobic001G141400--Sobic009G194000 Sobic003G190200 Sobic003G190200 Sobic001G141400--Sobic003G190200 Sobic007G172700 Sobic007G172700 Sobic001G141400--Sobic007G172700 Sobic001G490900 Sobic001G490900 Sobic001G141400--Sobic001G490900 Sobic002G200000 Sobic002G200000 Sobic001G141400--Sobic002G200000 Sobic003G039900 Sobic003G039900 Sobic001G141400--Sobic003G039900 Sobic003G181700 Sobic003G181700 Sobic004G122900--Sobic003G181700 Sobic009G122500 Sobic009G122500 Sobic004G122900--Sobic009G122500 Sobic004G122900--Sobic009G194000 Sobic001G156900 Sobic001G156900 Sobic004G122900--Sobic001G156900 Sobic001G043200 Sobic001G043200 Sobic004G122900--Sobic001G043200 Sobic001G335000 Sobic001G335000 Sobic004G122900--Sobic001G335000 Sobic001G308400 Sobic001G308400 Sobic004G122900--Sobic001G308400 Sobic003G021600 Sobic003G021600 Sobic004G122900--Sobic003G021600 Sobic002G227500 Sobic002G227500 Sobic004G122900--Sobic002G227500 Sobic002G147200--Sobic007G030100 Sobic002G147100 Sobic002G147100 Sobic002G147200--Sobic002G147100 Sobic002G147200--Sobic003G190200 Sobic009G040250 Sobic009G040250 Sobic002G147200--Sobic009G040250 Sobic005G063200 Sobic005G063200 Sobic002G147200--Sobic005G063200 Sobic003G428000 Sobic003G428000 Sobic002G147200--Sobic003G428000 Sobic003G117800 Sobic003G117800 Sobic002G147200--Sobic003G117800 Sobic001G114200 Sobic001G114200 Sobic002G147200--Sobic001G114200 Sobic001G385000 Sobic001G385000 Sobic002G147200--Sobic001G385000 Sobic007G158900 Sobic007G158900 Sobic009G199500--Sobic007G158900 Sobic009G227100 Sobic009G227100 Sobic009G199500--Sobic009G227100 Sobic003G445200 Sobic003G445200 Sobic009G199500--Sobic003G445200 Sobic002G299100 Sobic002G299100 Sobic009G199500--Sobic002G299100 Sobic002G131400 Sobic002G131400 Sobic009G199500--Sobic002G131400 Sobic009G199500--Sobic004G122900 Sobic004G084400 Sobic004G084400 Sobic009G199500--Sobic004G084400 Sobic009G199500--Sobic001G043200 Sobic002G398500 Sobic002G398500 Sobic009G199500--Sobic002G398500 Sobic004G042900--Sobic002G147100 Sobic001G017200 Sobic001G017200 Sobic004G042900--Sobic001G017200 Sobic004G042900--Sobic005G009100 Sobic004G353400 Sobic004G353400 Sobic004G042900--Sobic004G353400 Sobic004G042900--Sobic007G030100 Sobic004G042900--Sobic003G190200 Sobic006G144000 Sobic006G144000 Sobic004G042900--Sobic006G144000 Sobic004G042900--Sobic002G147200 Sobic004G218300 Sobic004G218300 Sobic004G042900--Sobic004G218300 Sobic003G353700 Sobic003G353700 Sobic007G192400--Sobic003G353700 Sobic008G006000 Sobic008G006000 Sobic007G192400--Sobic008G006000 Sobic007G077532 Sobic007G077532 Sobic007G192400--Sobic007G077532 Sobic007G192400--Sobic010G181600 Sobic007G192400--Sobic009G252300 Sobic004G259300 Sobic004G259300 Sobic007G192400--Sobic004G259300 Sobic002G203600 Sobic002G203600 Sobic007G192400--Sobic002G203600 Sobic008G036600 Sobic008G036600 Sobic007G192400--Sobic008G036600 Sobic004G141400 Sobic004G141400 Sobic007G192400--Sobic004G141400 Sobic003G058500 Sobic003G058500 Sobic010G181600--Sobic003G058500 Sobic001G424800 Sobic001G424800 Sobic010G181600--Sobic001G424800 Sobic010G181600--Sobic003G117800 Sobic010G181600--Sobic001G475300 Sobic010G181600--Sobic008G006000 Sobic010G181600--Sobic003G353700 Sobic007G218600 Sobic007G218600 Sobic010G181600--Sobic007G218600 Sobic004G004100 Sobic004G004100 Sobic010G181600--Sobic004G004100 Sobic010G181600--Sobic003G250400 Sobic006G237500 Sobic006G237500 Sobic005G123400--Sobic006G237500 Sobic010G112600 Sobic010G112600 Sobic005G123400--Sobic010G112600 Sobic003G393200 Sobic003G393200 Sobic005G123400--Sobic003G393200 Sobic005G123400--Sobic001G043200 Sobic005G123400--Sobic009G227100 Sobic005G123400--Sobic009G252300 Sobic005G123400--Sobic007G030100 Sobic005G123400--Sobic003G190200 Sobic003G368400 Sobic003G368400 Sobic005G123400--Sobic003G368400 Sobic007G030100--Sobic003G190200 Sobic007G030100--Sobic002G147200 Sobic003G394500 Sobic003G394500 Sobic007G030100--Sobic003G394500 Sobic007G030100--Sobic003G117800 Sobic007G030100--Sobic001G385000 Sobic007G030100--Sobic007G172700 Sobic007G030100--Sobic001G424800 Sobic006G232800 Sobic006G232800 Sobic007G030100--Sobic006G232800 Sobic007G030100--Sobic003G428000
Octagon: transcription factors


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