Gene annotation
Transcriptome id Sobic.005G000300.2,Sobic.005G000300.3,Sobic.005G000300.1
Synonym Sb05g000220
Functional annotation RNase P subunit p30, putative, expressed
UniProt A0A1Z5RGN0 , A0A1Z5RGE6 , A0A1Z5RFX6
Pfam PF01876
Panther DB PTHR13031
NCBI CDD KOG2363; Protein subunit of nuclear ribonuclease P (RNase P)
KEGG Orthology K03539; RPP1, ribonuclease P/MRP protein subunit RPP1
Gene Ontology GO:0008033; tRNA processing GO:0004540ribonuclease activity


Orthologs (automatic annotation)
TAIR AT5G59980 : Polymerase/histidinol phosphatase-like
RAP-DB (Rice) LOC_Os12g01060.1,LOC_Os11g01074.1,LOC_Os11g01074.3 : RNase P subunit p30, putative, expressed
MaizeGDB (Corn) Zm00025a028906
Brachypodium KQJ92703
Barley HORVU4Hr1G024320.1 , HORVU4Hr1G024320.2 , HORVU4Hr1G024320.4 , HORVU4Hr1G024320.9
Wheat TraesCS4D02G133300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G112600 zinc finger family protein, putative, expressed -
2 Sobic.004G031300 PPR repeat domain containing protein, putative, expressed -
3 Sobic.010G091500 pentatricopeptide, putative, expressed -
4 Sobic.003G123200 la domain containing protein, putative, expressed K18757: la-related protein 1
5 Sobic.010G224700 - K17680: twinkle protein
6 Sobic.001G334100 1-5-phosphoribosyl-5-5-phosphoribosylaminomethylideneaminoimidazole-4-carboxamide isomerase, chloroplast precursor, putative, expressed K01814: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
7 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
8 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
9 Sobic.008G163500 WD domain, G-beta repeat domain containing protein, expressed K14552: NAN1, UTP17, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
10 Sobic.006G013100 expressed protein K13205: AAR2, A1 cistron-splicing factor AAR2
11 Sobic.002G423400 PPR repeat containing protein, expressed -
12 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
13 Sobic.001G173800 nop14-like family protein, expressed K14766: NOP14, nucleolar protein 14
14 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
15 Sobic.006G193300 nucleolar complex protein, putative, expressed K14771: NOC4, U3 small nucleolar RNA-associated protein 19
16 Sobic.010G205900 WD repeat-containing protein, putative, expressed K14554: UTP21, U3 small nucleolar RNA-associated protein 21
17 Sobic.008G017100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
18 Sobic.005G098800 CIP111, putative, expressed K14575: AFG2, DRG1, AAA family ATPase
19 Sobic.003G199300 down-regulated in metastasis family protein, expressed K14772: U3 small nucleolar RNA-associated protein 20
20 Sobic.002G142600 NLI interacting factor-like phosphatase, putative, expressed -


Gene co-expression network
sample Sobic005G000300 Sobic005G000300 Sobic002G112600 Sobic002G112600 Sobic005G000300--Sobic002G112600 Sobic004G031300 Sobic004G031300 Sobic005G000300--Sobic004G031300 Sobic010G091500 Sobic010G091500 Sobic005G000300--Sobic010G091500 Sobic003G123200 Sobic003G123200 Sobic005G000300--Sobic003G123200 Sobic010G224700 Sobic010G224700 Sobic005G000300--Sobic010G224700 Sobic001G334100 Sobic001G334100 Sobic005G000300--Sobic001G334100 Sobic009G246500 Sobic009G246500 Sobic005G000300--Sobic009G246500 Sobic002G378100 Sobic002G378100 Sobic005G000300--Sobic002G378100 Sobic008G163500 Sobic008G163500 Sobic005G000300--Sobic008G163500 Sobic004G151000 Sobic004G151000 Sobic002G112600--Sobic004G151000 Sobic004G215900 Sobic004G215900 Sobic002G112600--Sobic004G215900 Sobic002G112600--Sobic010G224700 Sobic007G014800 Sobic007G014800 Sobic002G112600--Sobic007G014800 Sobic002G112600--Sobic005G000300 Sobic004G027400 Sobic004G027400 Sobic002G112600--Sobic004G027400 Sobic009G163600 Sobic009G163600 Sobic002G112600--Sobic009G163600 Sobic001G453500 Sobic001G453500 Sobic002G112600--Sobic001G453500 Sobic004G027300 Sobic004G027300 Sobic002G112600--Sobic004G027300 Sobic001G004100 Sobic001G004100 Sobic004G031300--Sobic001G004100 Sobic006G245900 Sobic006G245900 Sobic004G031300--Sobic006G245900 Sobic006G191200 Sobic006G191200 Sobic004G031300--Sobic006G191200 Sobic004G031300--Sobic005G000300 Sobic006G125500 Sobic006G125500 Sobic004G031300--Sobic006G125500 Sobic002G296400 Sobic002G296400 Sobic004G031300--Sobic002G296400 Sobic006G002800 Sobic006G002800 Sobic004G031300--Sobic006G002800 Sobic003G308500 Sobic003G308500 Sobic004G031300--Sobic003G308500 Sobic002G381900 Sobic002G381900 Sobic004G031300--Sobic002G381900 Sobic010G091500--Sobic005G000300 Sobic003G322200 Sobic003G322200 Sobic010G091500--Sobic003G322200 Sobic008G152300 Sobic008G152300 Sobic010G091500--Sobic008G152300 Sobic006G069100 Sobic006G069100 Sobic010G091500--Sobic006G069100 Sobic003G067201 Sobic003G067201 Sobic010G091500--Sobic003G067201 Sobic005G028300 Sobic005G028300 Sobic010G091500--Sobic005G028300 Sobic002G084400 Sobic002G084400 Sobic010G091500--Sobic002G084400 Sobic002G344500 Sobic002G344500 Sobic010G091500--Sobic002G344500 Sobic006G208400 Sobic006G208400 Sobic010G091500--Sobic006G208400 Sobic005G098800 Sobic005G098800 Sobic003G123200--Sobic005G098800 Sobic003G123200--Sobic008G163500 Sobic010G205900 Sobic010G205900 Sobic003G123200--Sobic010G205900 Sobic003G123200--Sobic009G246500 Sobic008G049100 Sobic008G049100 Sobic003G123200--Sobic008G049100 Sobic005G028100 Sobic005G028100 Sobic003G123200--Sobic005G028100 Sobic002G423400 Sobic002G423400 Sobic003G123200--Sobic002G423400 Sobic006G198600 Sobic006G198600 Sobic003G123200--Sobic006G198600 Sobic003G123200--Sobic010G224700 Sobic010G224700--Sobic002G378100 Sobic008G017100 Sobic008G017100 Sobic010G224700--Sobic008G017100 Sobic010G224700--Sobic004G027300 Sobic001G119600 Sobic001G119600 Sobic010G224700--Sobic001G119600 Sobic010G224700--Sobic003G123200 Sobic010G224700--Sobic008G163500 Sobic001G049800 Sobic001G049800 Sobic010G224700--Sobic001G049800 Sobic003G425100 Sobic003G425100 Sobic010G224700--Sobic003G425100 Sobic003G199300 Sobic003G199300 Sobic010G224700--Sobic003G199300 Sobic007G143500 Sobic007G143500 Sobic001G334100--Sobic007G143500 Sobic003G184400 Sobic003G184400 Sobic001G334100--Sobic003G184400 Sobic005G199200 Sobic005G199200 Sobic001G334100--Sobic005G199200 Sobic003G259600 Sobic003G259600 Sobic001G334100--Sobic003G259600 Sobic005G059400 Sobic005G059400 Sobic001G334100--Sobic005G059400 Sobic002G142600 Sobic002G142600 Sobic001G334100--Sobic002G142600 Sobic006G180700 Sobic006G180700 Sobic001G334100--Sobic006G180700 Sobic004G067400 Sobic004G067400 Sobic001G334100--Sobic004G067400 Sobic001G334100--Sobic005G000300 Sobic009G246500--Sobic008G049100 Sobic009G246500--Sobic010G205900 Sobic009G246500--Sobic003G123200 Sobic009G246500--Sobic008G163500 Sobic009G246500--Sobic005G098800 Sobic002G071400 Sobic002G071400 Sobic009G246500--Sobic002G071400 Sobic009G246500--Sobic002G423400 Sobic004G224600 Sobic004G224600 Sobic009G246500--Sobic004G224600 Sobic009G101200 Sobic009G101200 Sobic009G246500--Sobic009G101200 Sobic006G185200 Sobic006G185200 Sobic002G378100--Sobic006G185200 Sobic006G128400 Sobic006G128400 Sobic002G378100--Sobic006G128400 Sobic002G378100--Sobic004G151000 Sobic002G378100--Sobic010G224700 Sobic010G083900 Sobic010G083900 Sobic002G378100--Sobic010G083900 Sobic002G092050 Sobic002G092050 Sobic002G378100--Sobic002G092050 Sobic002G378100--Sobic004G027300 Sobic001G422500 Sobic001G422500 Sobic002G378100--Sobic001G422500 Sobic009G213200 Sobic009G213200 Sobic002G378100--Sobic009G213200 Sobic008G163500--Sobic005G028100 Sobic008G163500--Sobic003G123200 Sobic008G163500--Sobic009G246500 Sobic008G163500--Sobic010G205900 Sobic008G163500--Sobic008G049100 Sobic008G163500--Sobic005G098800 Sobic008G163500--Sobic001G422500 Sobic008G163500--Sobic010G224700 Sobic004G036700 Sobic004G036700 Sobic008G163500--Sobic004G036700
Octagon: transcription factors


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