Gene annotation
Transcriptome id Sobic.001G173800.1
Synonym Sb01g015150
Functional annotation nop14-like family protein, expressed
UniProt C5WT96
Pfam PF04147
Panther DB PTHR23183 PTHR23183:SF0
NCBI CDD -
KEGG Orthology K14766; NOP14, nucleolar protein 14
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G69070 : -
RAP-DB (Rice) LOC_Os03g40110.1 : nop14-like family protein, expressed
MaizeGDB (Corn) Zm00025a007199
Brachypodium KQK14277 , PNT74471
Barley HORVU5Hr1G076110.1 , HORVU5Hr1G076110.2 , HORVU5Hr1G076110.3 , HORVU5Hr1G076110.4 , HORVU5Hr1G076110.5
Wheat TraesCS5D02G292100 , TraesCS5D02G292100 , TraesCS5B02G283900 , TraesCS5A02G284700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G382500 AARP2CN domain containing protein, expressed K14569: ribosome biogenesis protein BMS1
2 Sobic.001G501400 WD domain, G-beta repeat domain containing protein, expressed K14556: DIP2, UTP12, U3 small nucleolar RNA-associated protein 12
3 Sobic.008G163500 WD domain, G-beta repeat domain containing protein, expressed K14552: NAN1, UTP17, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
4 Sobic.008G049100 nucleolar protein family 6, putative, expressed K14544: UTP22, U3 small nucleolar RNA-associated protein 22
5 Sobic.009G173600 expressed protein K14572: MDN1, midasin
6 Sobic.009G235200 ribosomal RNA large subunit methyltransferase J, putative, expressed K14857: SPB1, AdoMet-dependent rRNA methyltransferase SPB1
7 Sobic.003G156500 WD domain, G-beta repeat domain containing protein, expressed K14824: ERB1, ribosome biogenesis protein ERB1
8 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
9 Sobic.005G000300 RNase P subunit p30, putative, expressed K03539: RPP1, ribonuclease P/MRP protein subunit RPP1
10 Sobic.002G378100 DNA-directed RNA polymerase 1B, mitochondrial precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
11 Sobic.006G095400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K14826: FK506-binding nuclear protein
12 Sobic.001G119600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
13 Sobic.007G201700 mTERF domain containing protein, expressed -
14 Sobic.003G123200 la domain containing protein, putative, expressed K18757: la-related protein 1
15 Sobic.006G128400 PPR repeat containing protein, expressed -
16 Sobic.007G014800 RNA recognition motif containing protein, putative, expressed -
17 Sobic.006G013100 expressed protein K13205: AAR2, A1 cistron-splicing factor AAR2
18 Sobic.001G358600 LTV1, putative, expressed K14798: protein LTV1
19 Sobic.009G217200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K02999: RPA1, DNA-directed RNA polymerase I subunit RPA1
20 Sobic.010G224700 - K17680: twinkle protein


Gene co-expression network
sample Sobic001G173800 Sobic001G173800 Sobic001G382500 Sobic001G382500 Sobic001G173800--Sobic001G382500 Sobic001G501400 Sobic001G501400 Sobic001G173800--Sobic001G501400 Sobic008G163500 Sobic008G163500 Sobic001G173800--Sobic008G163500 Sobic008G049100 Sobic008G049100 Sobic001G173800--Sobic008G049100 Sobic009G173600 Sobic009G173600 Sobic001G173800--Sobic009G173600 Sobic009G235200 Sobic009G235200 Sobic001G173800--Sobic009G235200 Sobic003G156500 Sobic003G156500 Sobic001G173800--Sobic003G156500 Sobic009G246500 Sobic009G246500 Sobic001G173800--Sobic009G246500 Sobic005G000300 Sobic005G000300 Sobic001G173800--Sobic005G000300 Sobic001G382500--Sobic001G173800 Sobic001G382500--Sobic009G235200 Sobic001G382500--Sobic009G173600 Sobic006G245800 Sobic006G245800 Sobic001G382500--Sobic006G245800 Sobic001G382500--Sobic001G501400 Sobic001G382500--Sobic003G156500 Sobic009G217200 Sobic009G217200 Sobic001G382500--Sobic009G217200 Sobic001G453400 Sobic001G453400 Sobic001G382500--Sobic001G453400 Sobic010G114900 Sobic010G114900 Sobic001G382500--Sobic010G114900 Sobic001G358600 Sobic001G358600 Sobic001G501400--Sobic001G358600 Sobic006G128400 Sobic006G128400 Sobic001G501400--Sobic006G128400 Sobic001G501400--Sobic003G156500 Sobic001G501400--Sobic001G173800 Sobic006G125900 Sobic006G125900 Sobic001G501400--Sobic006G125900 Sobic001G501400--Sobic008G049100 Sobic010G003400 Sobic010G003400 Sobic001G501400--Sobic010G003400 Sobic002G378100 Sobic002G378100 Sobic001G501400--Sobic002G378100 Sobic006G193300 Sobic006G193300 Sobic001G501400--Sobic006G193300 Sobic005G028100 Sobic005G028100 Sobic008G163500--Sobic005G028100 Sobic003G123200 Sobic003G123200 Sobic008G163500--Sobic003G123200 Sobic008G163500--Sobic009G246500 Sobic010G205900 Sobic010G205900 Sobic008G163500--Sobic010G205900 Sobic008G163500--Sobic008G049100 Sobic005G098800 Sobic005G098800 Sobic008G163500--Sobic005G098800 Sobic001G422500 Sobic001G422500 Sobic008G163500--Sobic001G422500 Sobic010G224700 Sobic010G224700 Sobic008G163500--Sobic010G224700 Sobic004G036700 Sobic004G036700 Sobic008G163500--Sobic004G036700 Sobic008G049100--Sobic010G205900 Sobic002G071400 Sobic002G071400 Sobic008G049100--Sobic002G071400 Sobic008G049100--Sobic009G246500 Sobic003G199300 Sobic003G199300 Sobic008G049100--Sobic003G199300 Sobic008G049100--Sobic003G123200 Sobic008G049100--Sobic005G098800 Sobic002G234300 Sobic002G234300 Sobic008G049100--Sobic002G234300 Sobic008G049100--Sobic008G163500 Sobic008G049100--Sobic006G193300 Sobic009G173600--Sobic002G071400 Sobic009G173600--Sobic008G049100 Sobic009G173600--Sobic001G173800 Sobic009G173600--Sobic001G382500 Sobic009G173600--Sobic010G205900 Sobic001G544300 Sobic001G544300 Sobic009G173600--Sobic001G544300 Sobic009G173600--Sobic003G123200 Sobic009G173600--Sobic003G199300 Sobic009G173600--Sobic009G246500 Sobic009G235200--Sobic008G163500 Sobic006G226300 Sobic006G226300 Sobic009G235200--Sobic006G226300 Sobic002G142600 Sobic002G142600 Sobic009G235200--Sobic002G142600 Sobic003G042400 Sobic003G042400 Sobic009G235200--Sobic003G042400 Sobic007G014800 Sobic007G014800 Sobic009G235200--Sobic007G014800 Sobic002G399200 Sobic002G399200 Sobic009G235200--Sobic002G399200 Sobic009G235200--Sobic001G173800 Sobic005G199200 Sobic005G199200 Sobic009G235200--Sobic005G199200 Sobic002G263700 Sobic002G263700 Sobic009G235200--Sobic002G263700 Sobic003G156500--Sobic001G453400 Sobic003G156500--Sobic009G217200 Sobic003G156500--Sobic001G501400 Sobic003G156500--Sobic010G003400 Sobic003G260400 Sobic003G260400 Sobic003G156500--Sobic003G260400 Sobic001G503900 Sobic001G503900 Sobic003G156500--Sobic001G503900 Sobic003G156500--Sobic001G358600 Sobic010G102600 Sobic010G102600 Sobic003G156500--Sobic010G102600 Sobic004G320500 Sobic004G320500 Sobic003G156500--Sobic004G320500 Sobic009G246500--Sobic008G049100 Sobic009G246500--Sobic010G205900 Sobic009G246500--Sobic003G123200 Sobic009G246500--Sobic008G163500 Sobic009G246500--Sobic005G098800 Sobic009G246500--Sobic002G071400 Sobic002G423400 Sobic002G423400 Sobic009G246500--Sobic002G423400 Sobic004G224600 Sobic004G224600 Sobic009G246500--Sobic004G224600 Sobic009G101200 Sobic009G101200 Sobic009G246500--Sobic009G101200 Sobic002G112600 Sobic002G112600 Sobic005G000300--Sobic002G112600 Sobic004G031300 Sobic004G031300 Sobic005G000300--Sobic004G031300 Sobic010G091500 Sobic010G091500 Sobic005G000300--Sobic010G091500 Sobic005G000300--Sobic003G123200 Sobic005G000300--Sobic010G224700 Sobic001G334100 Sobic001G334100 Sobic005G000300--Sobic001G334100 Sobic005G000300--Sobic009G246500 Sobic005G000300--Sobic002G378100 Sobic005G000300--Sobic008G163500
Octagon: transcription factors


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