Gene annotation
Transcriptome id Sobic.007G201700.1
Synonym Sb07g026910
Functional annotation mTERF domain containing protein, expressed
UniProt C5YI99
Pfam PF02536
Panther DB PTHR13068 PTHR13068:SF7
NCBI CDD KOG1267; Mitochondrial transcription termination factor, mTERF
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005739mitochondrion GO:0003690double-stranded DNA binding


Orthologs (automatic annotation)
TAIR AT4G19650 : Mitochondrial transcription termination factor family protein
RAP-DB (Rice) LOC_Os08g40630.1 : mTERF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005167
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G201700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G112600 zinc finger family protein, putative, expressed -
2 Sobic.002G423400 PPR repeat containing protein, expressed -
3 Sobic.001G119600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
4 Sobic.009G246500 N-acetyltransferase 10, putative, expressed K14521: NAT10, N-acetyltransferase 10
5 Sobic.010G224700 - K17680: twinkle protein
6 Sobic.008G049100 nucleolar protein family 6, putative, expressed K14544: UTP22, U3 small nucleolar RNA-associated protein 22
7 Sobic.006G128400 PPR repeat containing protein, expressed -
8 Sobic.008G163500 WD domain, G-beta repeat domain containing protein, expressed K14552: NAN1, UTP17, NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
9 Sobic.005G098800 CIP111, putative, expressed K14575: AFG2, DRG1, AAA family ATPase
10 Sobic.001G173800 nop14-like family protein, expressed K14766: NOP14, nucleolar protein 14
11 Sobic.001G501400 WD domain, G-beta repeat domain containing protein, expressed K14556: DIP2, UTP12, U3 small nucleolar RNA-associated protein 12
12 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
13 Sobic.007G075800 GTPase of unknown function domain containing protein, putative, expressed -
14 Sobic.002G318800 - K14776: DDX10, ATP-dependent RNA helicase DDX10/DBP4
15 Sobic.006G125500 expressed protein -
16 Sobic.009G217200 DNA-directed RNA polymerase III subunit RPC1, putative, expressed K02999: RPA1, DNA-directed RNA polymerase I subunit RPA1
17 Sobic.003G123200 la domain containing protein, putative, expressed K18757: la-related protein 1
18 Sobic.001G239800 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
19 Sobic.006G013100 expressed protein K13205: AAR2, A1 cistron-splicing factor AAR2
20 Sobic.009G211200 tRNAHis guanylyltransferase family protein, expressed K10761: tRNA(His) guanylyltransferase


Gene co-expression network
sample Sobic007G201700 Sobic007G201700 Sobic002G112600 Sobic002G112600 Sobic007G201700--Sobic002G112600 Sobic002G423400 Sobic002G423400 Sobic007G201700--Sobic002G423400 Sobic001G119600 Sobic001G119600 Sobic007G201700--Sobic001G119600 Sobic009G246500 Sobic009G246500 Sobic007G201700--Sobic009G246500 Sobic010G224700 Sobic010G224700 Sobic007G201700--Sobic010G224700 Sobic008G049100 Sobic008G049100 Sobic007G201700--Sobic008G049100 Sobic006G128400 Sobic006G128400 Sobic007G201700--Sobic006G128400 Sobic008G163500 Sobic008G163500 Sobic007G201700--Sobic008G163500 Sobic005G098800 Sobic005G098800 Sobic007G201700--Sobic005G098800 Sobic004G151000 Sobic004G151000 Sobic002G112600--Sobic004G151000 Sobic004G215900 Sobic004G215900 Sobic002G112600--Sobic004G215900 Sobic002G112600--Sobic010G224700 Sobic007G014800 Sobic007G014800 Sobic002G112600--Sobic007G014800 Sobic005G000300 Sobic005G000300 Sobic002G112600--Sobic005G000300 Sobic004G027400 Sobic004G027400 Sobic002G112600--Sobic004G027400 Sobic009G163600 Sobic009G163600 Sobic002G112600--Sobic009G163600 Sobic001G453500 Sobic001G453500 Sobic002G112600--Sobic001G453500 Sobic004G027300 Sobic004G027300 Sobic002G112600--Sobic004G027300 Sobic003G123200 Sobic003G123200 Sobic002G423400--Sobic003G123200 Sobic002G423400--Sobic009G246500 Sobic002G423400--Sobic005G098800 Sobic002G423400--Sobic010G224700 Sobic010G205900 Sobic010G205900 Sobic002G423400--Sobic010G205900 Sobic002G423400--Sobic008G049100 Sobic002G423400--Sobic007G201700 Sobic006G208400 Sobic006G208400 Sobic002G423400--Sobic006G208400 Sobic002G423400--Sobic001G119600 Sobic002G262100 Sobic002G262100 Sobic001G119600--Sobic002G262100 Sobic001G119600--Sobic010G224700 Sobic001G119600--Sobic003G123200 Sobic003G425100 Sobic003G425100 Sobic001G119600--Sobic003G425100 Sobic002G378100 Sobic002G378100 Sobic001G119600--Sobic002G378100 Sobic001G119600--Sobic008G163500 Sobic001G119600--Sobic008G049100 Sobic006G198600 Sobic006G198600 Sobic001G119600--Sobic006G198600 Sobic006G231800 Sobic006G231800 Sobic001G119600--Sobic006G231800 Sobic009G246500--Sobic008G049100 Sobic009G246500--Sobic010G205900 Sobic009G246500--Sobic003G123200 Sobic009G246500--Sobic008G163500 Sobic009G246500--Sobic005G098800 Sobic002G071400 Sobic002G071400 Sobic009G246500--Sobic002G071400 Sobic009G246500--Sobic002G423400 Sobic004G224600 Sobic004G224600 Sobic009G246500--Sobic004G224600 Sobic009G101200 Sobic009G101200 Sobic009G246500--Sobic009G101200 Sobic010G224700--Sobic002G378100 Sobic008G017100 Sobic008G017100 Sobic010G224700--Sobic008G017100 Sobic010G224700--Sobic004G027300 Sobic010G224700--Sobic001G119600 Sobic010G224700--Sobic003G123200 Sobic010G224700--Sobic008G163500 Sobic001G049800 Sobic001G049800 Sobic010G224700--Sobic001G049800 Sobic010G224700--Sobic003G425100 Sobic003G199300 Sobic003G199300 Sobic010G224700--Sobic003G199300 Sobic008G049100--Sobic010G205900 Sobic008G049100--Sobic002G071400 Sobic008G049100--Sobic009G246500 Sobic008G049100--Sobic003G199300 Sobic008G049100--Sobic003G123200 Sobic008G049100--Sobic005G098800 Sobic002G234300 Sobic002G234300 Sobic008G049100--Sobic002G234300 Sobic008G049100--Sobic008G163500 Sobic006G193300 Sobic006G193300 Sobic008G049100--Sobic006G193300 Sobic006G128400--Sobic002G378100 Sobic001G501400 Sobic001G501400 Sobic006G128400--Sobic001G501400 Sobic002G092050 Sobic002G092050 Sobic006G128400--Sobic002G092050 Sobic001G224200 Sobic001G224200 Sobic006G128400--Sobic001G224200 Sobic008G165900 Sobic008G165900 Sobic006G128400--Sobic008G165900 Sobic007G075800 Sobic007G075800 Sobic006G128400--Sobic007G075800 Sobic010G051700 Sobic010G051700 Sobic006G128400--Sobic010G051700 Sobic006G128400--Sobic010G224700 Sobic002G317100 Sobic002G317100 Sobic006G128400--Sobic002G317100 Sobic005G028100 Sobic005G028100 Sobic008G163500--Sobic005G028100 Sobic008G163500--Sobic003G123200 Sobic008G163500--Sobic009G246500 Sobic008G163500--Sobic010G205900 Sobic008G163500--Sobic008G049100 Sobic008G163500--Sobic005G098800 Sobic001G422500 Sobic001G422500 Sobic008G163500--Sobic001G422500 Sobic008G163500--Sobic010G224700 Sobic004G036700 Sobic004G036700 Sobic008G163500--Sobic004G036700 Sobic005G098800--Sobic003G123200 Sobic005G098800--Sobic008G049100 Sobic005G098800--Sobic010G205900 Sobic005G098800--Sobic009G246500 Sobic005G098800--Sobic008G163500 Sobic005G098800--Sobic002G423400 Sobic005G098800--Sobic005G028100 Sobic005G098800--Sobic010G224700 Sobic005G098800--Sobic004G215900
Octagon: transcription factors


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