Gene annotation
Transcriptome id Sobic.004G240000.1
Synonym Sb04g028135
Functional annotation phosphoenolpyruvate carboxylase kinase, putative, expressed
UniProt A0A194YSG9
Pfam PF00069
Panther DB PTHR11042 PTHR11042:SF98
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G49180 : protein kinase family protein
RAP-DB (Rice) LOC_Os03g21770.1 : phosphoenolpyruvate carboxylase kinase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G168000 expressed protein -
2 Sobic.004G215900 S1 RNA binding domain containing protein, expressed K00962: pnp, polyribonucleotide nucleotidyltransferase
3 Sobic.006G202000 COBW domain containing protein, putative, expressed -
4 Sobic.009G191500 pseudouridylate synthase, putative, expressed K06176: truD, tRNA pseudouridine13 synthase
5 Sobic.008G063600 glycosyl hydrolase family protein 27, putative, expressed -
6 Sobic.001G027500 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.008G111600 heat shock protein, putative, expressed K09487: HSP90B, heat shock protein 90kDa beta
8 Sobic.006G262501 - -
9 Sobic.006G236000 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
10 Sobic.010G175000 expressed protein -
11 Sobic.004G027400 - -
12 Sobic.008G118100 kelch repeat protein, putative, expressed -
13 Sobic.003G396700 DCL2, putative, expressed K11592: DICER1, endoribonuclease Dicer
14 Sobic.010G264900 OsFBX79 - F-box domain containing protein, expressed -
15 Sobic.005G079201 - -
16 Sobic.008G068100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tRNA pseudouridine synthase family protein, putative, expressed K06173: truA, tRNA pseudouridine38-40 synthase
17 Sobic.002G003300 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
18 Sobic.002G043000 HEN1, putative, expressed -
19 Sobic.009G012600 RPA1C - Putative single-stranded DNA binding complex subunit 1, expressed K07466: RFA1, RPA1, replication factor A1
20 Sobic.006G275500 regulator of chromosome condensation, putative, expressed -


Gene co-expression network
sample Sobic004G240000 Sobic004G240000 Sobic002G168000 Sobic002G168000 Sobic004G240000--Sobic002G168000 Sobic004G215900 Sobic004G215900 Sobic004G240000--Sobic004G215900 Sobic006G202000 Sobic006G202000 Sobic004G240000--Sobic006G202000 Sobic009G191500 Sobic009G191500 Sobic004G240000--Sobic009G191500 Sobic008G063600 Sobic008G063600 Sobic004G240000--Sobic008G063600 Sobic001G027500 Sobic001G027500 Sobic004G240000--Sobic001G027500 Sobic008G111600 Sobic008G111600 Sobic004G240000--Sobic008G111600 Sobic006G262501 Sobic006G262501 Sobic004G240000--Sobic006G262501 Sobic006G236000 Sobic006G236000 Sobic004G240000--Sobic006G236000 Sobic007G187700 Sobic007G187700 Sobic002G168000--Sobic007G187700 Sobic005G153000 Sobic005G153000 Sobic002G168000--Sobic005G153000 Sobic002G021200 Sobic002G021200 Sobic002G168000--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic002G168000--Sobic006G281900 Sobic006G275500 Sobic006G275500 Sobic002G168000--Sobic006G275500 Sobic009G188900 Sobic009G188900 Sobic002G168000--Sobic009G188900 Sobic009G077300 Sobic009G077300 Sobic002G168000--Sobic009G077300 Sobic006G016700 Sobic006G016700 Sobic002G168000--Sobic006G016700 Sobic001G104500 Sobic001G104500 Sobic002G168000--Sobic001G104500 Sobic008G068100 Sobic008G068100 Sobic004G215900--Sobic008G068100 Sobic004G215900--Sobic006G236000 Sobic004G215900--Sobic009G191500 Sobic002G003300 Sobic002G003300 Sobic004G215900--Sobic002G003300 Sobic001G024000 Sobic001G024000 Sobic004G215900--Sobic001G024000 Sobic004G215900--Sobic008G111600 Sobic004G038100 Sobic004G038100 Sobic004G215900--Sobic004G038100 Sobic002G112600 Sobic002G112600 Sobic004G215900--Sobic002G112600 Sobic002G043000 Sobic002G043000 Sobic004G215900--Sobic002G043000 Sobic006G202000--Sobic002G168000 Sobic009G060600 Sobic009G060600 Sobic006G202000--Sobic009G060600 Sobic006G202000--Sobic004G240000 Sobic006G202000--Sobic001G027500 Sobic003G140800 Sobic003G140800 Sobic006G202000--Sobic003G140800 Sobic006G202000--Sobic007G187700 Sobic006G226000 Sobic006G226000 Sobic006G202000--Sobic006G226000 Sobic006G202000--Sobic006G262501 Sobic001G458000 Sobic001G458000 Sobic006G202000--Sobic001G458000 Sobic009G191500--Sobic008G068100 Sobic009G191500--Sobic004G215900 Sobic001G483800 Sobic001G483800 Sobic009G191500--Sobic001G483800 Sobic005G079201 Sobic005G079201 Sobic009G191500--Sobic005G079201 Sobic005G088900 Sobic005G088900 Sobic009G191500--Sobic005G088900 Sobic009G191500--Sobic002G003300 Sobic010G153300 Sobic010G153300 Sobic009G191500--Sobic010G153300 Sobic007G060600 Sobic007G060600 Sobic009G191500--Sobic007G060600 Sobic003G336500 Sobic003G336500 Sobic009G191500--Sobic003G336500 Sobic008G063600--Sobic001G027500 Sobic008G063600--Sobic002G168000 Sobic009G012600 Sobic009G012600 Sobic008G063600--Sobic009G012600 Sobic003G396700 Sobic003G396700 Sobic008G063600--Sobic003G396700 Sobic009G045300 Sobic009G045300 Sobic008G063600--Sobic009G045300 Sobic003G188600 Sobic003G188600 Sobic008G063600--Sobic003G188600 Sobic003G129500 Sobic003G129500 Sobic008G063600--Sobic003G129500 Sobic008G045000 Sobic008G045000 Sobic008G063600--Sobic008G045000 Sobic008G063600--Sobic009G188900 Sobic010G257000 Sobic010G257000 Sobic001G027500--Sobic010G257000 Sobic001G027500--Sobic002G168000 Sobic001G027500--Sobic008G063600 Sobic004G222200 Sobic004G222200 Sobic001G027500--Sobic004G222200 Sobic001G027500--Sobic006G226000 Sobic001G027500--Sobic006G262501 Sobic002G055800 Sobic002G055800 Sobic001G027500--Sobic002G055800 Sobic001G027500--Sobic007G187700 Sobic001G027500--Sobic005G153000 Sobic002G426100 Sobic002G426100 Sobic008G111600--Sobic002G426100 Sobic006G181800 Sobic006G181800 Sobic008G111600--Sobic006G181800 Sobic002G362200 Sobic002G362200 Sobic008G111600--Sobic002G362200 Sobic008G111600--Sobic004G215900 Sobic008G111600--Sobic002G043000 Sobic008G111600--Sobic001G024000 Sobic002G078100 Sobic002G078100 Sobic008G111600--Sobic002G078100 Sobic008G111600--Sobic002G003300 Sobic003G144000 Sobic003G144000 Sobic008G111600--Sobic003G144000 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic005G036200 Sobic005G036200 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic010G175000 Sobic010G175000 Sobic006G262501--Sobic010G175000 Sobic006G236000--Sobic004G215900 Sobic006G236000--Sobic008G068100 Sobic003G123100 Sobic003G123100 Sobic006G236000--Sobic003G123100 Sobic006G236000--Sobic002G043000 Sobic006G112700 Sobic006G112700 Sobic006G236000--Sobic006G112700 Sobic006G236000--Sobic006G181800 Sobic006G236000--Sobic009G191500 Sobic006G236000--Sobic002G003300 Sobic006G236000--Sobic008G111600
Octagon: transcription factors


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