Gene annotation
Transcriptome id Sobic.004G248700.1
Synonym AtMYB20, MYB20
Functional annotation MYB family transcription factor, putative, expressed
UniProt A0A194YRK1
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF575
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G16600 : myb domain protein 43
RAP-DB (Rice) LOC_Os02g49986.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a056586 , Zm00025a055223 , Zm00025a012794 , Zm00025a009981 , Zm00025a031141 , Zm00025a005701 , Zm00025a005986 , Zm00025a034206 , Zm00025a046904 , Zm00025a046903 , Zm00025a034021 , Zm00025a048371 , Zm00025a047793 , Zm00025a029124 , Zm00025a004957 , Zm00025a014898 , Zm00025a042709 , Zm00025a034111 , Zm00025a007095 , Zm00025a010442 , Zm00025a032658 , Zm00025a056908
Brachypodium KQK00858 , KQJ91191 , KQK18687 , KQJ98346 , KQJ90159 , KQK00512 , KQJ90229 , KQK01592
Barley HORVU6Hr1G067380.1 , HORVU6Hr1G067380.2 , HORVU6Hr1G067380.3 , HORVU2Hr1G041300.4 , HORVU2Hr1G041300.2 , HORVU2Hr1G041300.3 , HORVU2Hr1G027600.3 , HORVU2Hr1G027600.2 , HORVU2Hr1G027600.4 , HORVU5Hr1G103970.5 , HORVU5Hr1G103970.4 , HORVU5Hr1G103970.1 , HORVU5Hr1G103970.3 , HORVU5Hr1G103970.2 , HORVU3Hr1G066860.7 , HORVU3Hr1G066860.6 , HORVU3Hr1G066860.5 , HORVU3Hr1G066860.4 , HORVU3Hr1G066860.3 , HORVU3Hr1G066860.2 , HORVU3Hr1G066860.1 , HORVU3Hr1G100500.2 , HORVU3Hr1G100500.1 , HORVU6Hr1G073500.5 , HORVU6Hr1G073500.4 , HORVU6Hr1G073500.3 , HORVU6Hr1G073500.1 , HORVU7Hr1G041810.9 , HORVU7Hr1G041810.8 , HORVU7Hr1G041810.1 , HORVU7Hr1G041810.3 , HORVU7Hr1G041810.2 , HORVU7Hr1G041810.5 , HORVU7Hr1G041810.4 , HORVU7Hr1G041810.7 , HORVU7Hr1G041810.6 , HORVU3Hr1G066860.9 , HORVU3Hr1G066860.8 , HORVU3Hr1G066860.11 , HORVU3Hr1G066860.10 , HORVU5Hr1G060650.10 , HORVU5Hr1G060650.1 , HORVU5Hr1G060650.2 , HORVU5Hr1G060650.3 , HORVU5Hr1G060650.4 , HORVU5Hr1G060650.5 , HORVU5Hr1G060650.6 , HORVU5Hr1G060650.7 , HORVU5Hr1G060650.9
Wheat TraesCS6D02G274900 , TraesCS2D02G158200 , TraesCS2D02G209600 , TraesCS5B02G203100 , TraesCS7A02G205100 , TraesCS2A02G206400 , TraesCS6A02G265300 , TraesCS2B02G177900 , TraesCS3A02G251200 , TraesCS3A02G251200 , TraesCS2A02G447500 , TraesCS6B02G292500 , TraesCS7B02G112400 , TraesCS7B02G112400 , TraesCS6D02G249200 , TraesCS6A02G294000 , TraesCS2A02G331200 , TraesCS3B02G280700 , TraesCS5A02G205200 , TraesCS2A02G152700 , TraesCS5D02G210900 , TraesCS3D02G251600 , TraesCS3D02G251600 , TraesCS7D02G208000 , TraesCS6B02G324600 , TraesCS6B02G324600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G116500 expressed protein -
2 Sobic.009G155900 hhH-GPD superfamily base excision DNA repair protein, expressed -
3 Sobic.003G434300 expressed protein -
4 Sobic.004G057700 zinc-binding protein, putative, expressed -
5 Sobic.005G138000 zinc knuckle domain containing protein, expressed -
6 Sobic.004G244200 expressed protein -
7 Sobic.007G143800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.005G120600 Highest expression level in embryo(PubMedID : 27501690)@OsSPL19 - SBP-box gene family member, expressed -
9 Sobic.009G000600 expressed protein -
10 Sobic.002G416150 - -
11 Sobic.001G004600 expressed protein -
12 Sobic.009G241966 - -
13 Sobic.004G142400 ATP-binding region, ATPase-like domain containing protein, expressed -
14 Sobic.006G240900 plant protein of unknown function DUF869 domain containing protein, expressed -
15 Sobic.005G102800 OsSCP48 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
16 Sobic.008G018100 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
17 Sobic.006G083900 PHD-finger domain containing protein, expressed -
18 Sobic.006G095900 OsSCP60 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
19 Sobic.006G208000 DNA repair ATPase-related, putative, expressed -
20 Sobic.008G165266 - -


Gene co-expression network
sample Sobic004G248700 Sobic004G248700 Sobic004G116500 Sobic004G116500 Sobic004G248700--Sobic004G116500 Sobic009G155900 Sobic009G155900 Sobic004G248700--Sobic009G155900 Sobic003G434300 Sobic003G434300 Sobic004G248700--Sobic003G434300 Sobic004G057700 Sobic004G057700 Sobic004G248700--Sobic004G057700 Sobic005G138000 Sobic005G138000 Sobic004G248700--Sobic005G138000 Sobic004G244200 Sobic004G244200 Sobic004G248700--Sobic004G244200 Sobic007G143800 Sobic007G143800 Sobic004G248700--Sobic007G143800 Sobic005G120600 Sobic005G120600 Sobic004G248700--Sobic005G120600 Sobic009G000600 Sobic009G000600 Sobic004G248700--Sobic009G000600 Sobic004G116500--Sobic005G120600 Sobic010G221200 Sobic010G221200 Sobic004G116500--Sobic010G221200 Sobic004G116500--Sobic004G248700 Sobic002G416150 Sobic002G416150 Sobic004G116500--Sobic002G416150 Sobic001G268700 Sobic001G268700 Sobic004G116500--Sobic001G268700 Sobic004G289500 Sobic004G289500 Sobic004G116500--Sobic004G289500 Sobic006G269600 Sobic006G269600 Sobic004G116500--Sobic006G269600 Sobic004G116500--Sobic009G155900 Sobic002G050500 Sobic002G050500 Sobic004G116500--Sobic002G050500 Sobic008G165300 Sobic008G165300 Sobic009G155900--Sobic008G165300 Sobic002G127900 Sobic002G127900 Sobic009G155900--Sobic002G127900 Sobic008G165266 Sobic008G165266 Sobic009G155900--Sobic008G165266 Sobic002G429700 Sobic002G429700 Sobic009G155900--Sobic002G429700 Sobic009G224300 Sobic009G224300 Sobic009G155900--Sobic009G224300 Sobic009G155900--Sobic005G138000 Sobic009G155900--Sobic004G248700 Sobic009G155900--Sobic003G434300 Sobic002G266300 Sobic002G266300 Sobic009G155900--Sobic002G266300 Sobic006G234433 Sobic006G234433 Sobic003G434300--Sobic006G234433 Sobic006G083900 Sobic006G083900 Sobic003G434300--Sobic006G083900 Sobic001G122600 Sobic001G122600 Sobic003G434300--Sobic001G122600 Sobic004G057700--Sobic009G000600 Sobic006G240900 Sobic006G240900 Sobic004G057700--Sobic006G240900 Sobic008G042200 Sobic008G042200 Sobic004G057700--Sobic008G042200 Sobic004G115700 Sobic004G115700 Sobic004G057700--Sobic004G115700 Sobic009G200000 Sobic009G200000 Sobic004G057700--Sobic009G200000 Sobic008G048966 Sobic008G048966 Sobic004G057700--Sobic008G048966 Sobic003G350400 Sobic003G350400 Sobic004G057700--Sobic003G350400 Sobic001G290500 Sobic001G290500 Sobic004G057700--Sobic001G290500 Sobic008G052300 Sobic008G052300 Sobic004G057700--Sobic008G052300 Sobic008G123200 Sobic008G123200 Sobic005G138000--Sobic008G123200 Sobic005G138000--Sobic003G434300 Sobic004G142400 Sobic004G142400 Sobic005G138000--Sobic004G142400 Sobic005G126701 Sobic005G126701 Sobic005G138000--Sobic005G126701 Sobic005G138000--Sobic006G083900 Sobic008G018100 Sobic008G018100 Sobic005G138000--Sobic008G018100 Sobic009G053300 Sobic009G053300 Sobic005G138000--Sobic009G053300 Sobic005G138000--Sobic008G165266 Sobic005G138000--Sobic003G350400 Sobic005G102800 Sobic005G102800 Sobic004G244200--Sobic005G102800 Sobic006G237600 Sobic006G237600 Sobic004G244200--Sobic006G237600 Sobic004G244200--Sobic004G248700 Sobic005G047900 Sobic005G047900 Sobic004G244200--Sobic005G047900 Sobic009G119800 Sobic009G119800 Sobic004G244200--Sobic009G119800 Sobic004G244200--Sobic009G155900 Sobic004G244200--Sobic003G434300 Sobic004G244200--Sobic004G057700 Sobic004G244200--Sobic008G018100 Sobic006G208000 Sobic006G208000 Sobic007G143800--Sobic006G208000 Sobic005G165800 Sobic005G165800 Sobic007G143800--Sobic005G165800 Sobic001G136400 Sobic001G136400 Sobic007G143800--Sobic001G136400 Sobic001G004600 Sobic001G004600 Sobic007G143800--Sobic001G004600 Sobic007G143800--Sobic006G083900 Sobic009G025500 Sobic009G025500 Sobic007G143800--Sobic009G025500 Sobic006G226000 Sobic006G226000 Sobic007G143800--Sobic006G226000 Sobic004G123200 Sobic004G123200 Sobic007G143800--Sobic004G123200 Sobic002G413200 Sobic002G413200 Sobic007G143800--Sobic002G413200 Sobic005G120600--Sobic004G116500 Sobic005G120600--Sobic001G268700 Sobic005G120600--Sobic010G221200 Sobic004G141000 Sobic004G141000 Sobic005G120600--Sobic004G141000 Sobic005G120600--Sobic002G416150 Sobic010G013500 Sobic010G013500 Sobic005G120600--Sobic010G013500 Sobic005G139300 Sobic005G139300 Sobic005G120600--Sobic005G139300 Sobic002G002500 Sobic002G002500 Sobic005G120600--Sobic002G002500 Sobic004G286250 Sobic004G286250 Sobic005G120600--Sobic004G286250 Sobic009G000600--Sobic004G057700 Sobic009G000600--Sobic001G290500 Sobic001G183500 Sobic001G183500 Sobic009G000600--Sobic001G183500 Sobic009G077300 Sobic009G077300 Sobic009G000600--Sobic009G077300 Sobic009G000600--Sobic010G013500 Sobic005G153000 Sobic005G153000 Sobic009G000600--Sobic005G153000 Sobic009G000600--Sobic006G240900 Sobic001G079900 Sobic001G079900 Sobic009G000600--Sobic001G079900 Sobic009G000600--Sobic008G048966
Octagon: transcription factors


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