Gene annotation
Transcriptome id Sobic.003G056000.2,Sobic.003G056000.1
Synonym CAN
Functional annotation staphylococcal nuclease homologue, putative, expressed
UniProt A0A1B6Q1H5 , A0A1B6Q1K2
Pfam PF00565
Panther DB PTHR12302
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56170 : Ca-2+ dependent nuclease
RAP-DB (Rice) LOC_Os01g07200.1 : staphylococcal nuclease homologue, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS3A02G097600 , TraesCS3B02G113300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G055900 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
2 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
3 Sobic.002G107400 aldehyde oxidase, putative, expressed -
4 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
5 Sobic.004G038200 - -
6 Sobic.009G006500 integral membrane protein DUF6 containing protein, expressed -
7 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
8 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
9 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
10 Sobic.002G271300 NC domain-containing protein, putative, expressed -
11 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
12 Sobic.004G159100 exostosin family domain containing protein, expressed -
13 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
14 Sobic.001G452200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Caleosin-related family protein("PubMedID : 26759170,PubMedID : 24597475")@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.002G374650 -(PubMedID : 26976818) K11517: (S)-2-hydroxy-acid oxidase
16 Sobic.008G097500 expressed protein -
17 Sobic.003G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.004G185200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
20 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase


Gene co-expression network
sample Sobic003G056000 Sobic003G056000 Sobic003G055900 Sobic003G055900 Sobic003G056000--Sobic003G055900 Sobic004G034200 Sobic004G034200 Sobic003G056000--Sobic004G034200 Sobic002G107400 Sobic002G107400 Sobic003G056000--Sobic002G107400 Sobic010G170300 Sobic010G170300 Sobic003G056000--Sobic010G170300 Sobic004G038200 Sobic004G038200 Sobic003G056000--Sobic004G038200 Sobic009G006500 Sobic009G006500 Sobic003G056000--Sobic009G006500 Sobic004G126700 Sobic004G126700 Sobic003G056000--Sobic004G126700 Sobic001G026300 Sobic001G026300 Sobic003G056000--Sobic001G026300 Sobic003G444200 Sobic003G444200 Sobic003G056000--Sobic003G444200 Sobic003G055900--Sobic003G056000 Sobic003G055900--Sobic003G444200 Sobic002G271300 Sobic002G271300 Sobic003G055900--Sobic002G271300 Sobic004G159100 Sobic004G159100 Sobic003G055900--Sobic004G159100 Sobic002G186900 Sobic002G186900 Sobic003G055900--Sobic002G186900 Sobic004G232300 Sobic004G232300 Sobic003G055900--Sobic004G232300 Sobic007G044400 Sobic007G044400 Sobic003G055900--Sobic007G044400 Sobic008G043500 Sobic008G043500 Sobic003G055900--Sobic008G043500 Sobic003G055900--Sobic010G170300 Sobic005G089200 Sobic005G089200 Sobic004G034200--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic004G034200--Sobic005G149600 Sobic004G034200--Sobic001G026300 Sobic004G108800 Sobic004G108800 Sobic004G034200--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic004G034200--Sobic007G156800 Sobic003G015200 Sobic003G015200 Sobic004G034200--Sobic003G015200 Sobic008G091557 Sobic008G091557 Sobic004G034200--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic004G034200--Sobic001G131001 Sobic007G038600 Sobic007G038600 Sobic004G034200--Sobic007G038600 Sobic002G107400--Sobic010G170300 Sobic004G101400 Sobic004G101400 Sobic002G107400--Sobic004G101400 Sobic002G107400--Sobic009G006500 Sobic002G107400--Sobic003G015200 Sobic002G107400--Sobic001G026300 Sobic002G107400--Sobic007G156800 Sobic009G015500 Sobic009G015500 Sobic002G107400--Sobic009G015500 Sobic002G107400--Sobic005G149600 Sobic001G452200 Sobic001G452200 Sobic002G107400--Sobic001G452200 Sobic010G170300--Sobic005G089200 Sobic010G170300--Sobic002G107400 Sobic010G170300--Sobic005G149600 Sobic010G170300--Sobic003G015200 Sobic010G170300--Sobic001G026300 Sobic005G152500 Sobic005G152500 Sobic010G170300--Sobic005G152500 Sobic010G170300--Sobic004G126700 Sobic006G117500 Sobic006G117500 Sobic010G170300--Sobic006G117500 Sobic003G287200 Sobic003G287200 Sobic010G170300--Sobic003G287200 Sobic010G220300 Sobic010G220300 Sobic004G038200--Sobic010G220300 Sobic002G094600 Sobic002G094600 Sobic004G038200--Sobic002G094600 Sobic001G163800 Sobic001G163800 Sobic004G038200--Sobic001G163800 Sobic009G250100 Sobic009G250100 Sobic004G038200--Sobic009G250100 Sobic004G193500 Sobic004G193500 Sobic004G038200--Sobic004G193500 Sobic001G002800 Sobic001G002800 Sobic004G038200--Sobic001G002800 Sobic002G030800 Sobic002G030800 Sobic004G038200--Sobic002G030800 Sobic004G038200--Sobic003G287200 Sobic002G254900 Sobic002G254900 Sobic004G038200--Sobic002G254900 Sobic009G006500--Sobic009G015500 Sobic007G058600 Sobic007G058600 Sobic009G006500--Sobic007G058600 Sobic009G006500--Sobic003G015200 Sobic004G308300 Sobic004G308300 Sobic009G006500--Sobic004G308300 Sobic006G181900 Sobic006G181900 Sobic009G006500--Sobic006G181900 Sobic010G070750 Sobic010G070750 Sobic009G006500--Sobic010G070750 Sobic006G142000 Sobic006G142000 Sobic009G006500--Sobic006G142000 Sobic009G006500--Sobic002G107400 Sobic001G323600 Sobic001G323600 Sobic009G006500--Sobic001G323600 Sobic004G126700--Sobic003G287200 Sobic004G126700--Sobic001G026300 Sobic004G126700--Sobic005G089200 Sobic004G126700--Sobic010G170300 Sobic006G183900 Sobic006G183900 Sobic004G126700--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic004G126700--Sobic006G229100 Sobic008G034700 Sobic008G034700 Sobic004G126700--Sobic008G034700 Sobic004G126700--Sobic005G149600 Sobic001G108000 Sobic001G108000 Sobic004G126700--Sobic001G108000 Sobic001G026300--Sobic005G149600 Sobic001G026300--Sobic005G089200 Sobic001G026300--Sobic003G015200 Sobic001G026300--Sobic004G034200 Sobic001G026300--Sobic004G108800 Sobic001G026300--Sobic007G156800 Sobic001G026300--Sobic010G170300 Sobic001G026300--Sobic004G126700 Sobic001G464300 Sobic001G464300 Sobic001G026300--Sobic001G464300 Sobic006G102900 Sobic006G102900 Sobic003G444200--Sobic006G102900 Sobic001G401600 Sobic001G401600 Sobic003G444200--Sobic001G401600 Sobic009G189200 Sobic009G189200 Sobic003G444200--Sobic009G189200 Sobic010G101600 Sobic010G101600 Sobic003G444200--Sobic010G101600 Sobic010G089500 Sobic010G089500 Sobic003G444200--Sobic010G089500 Sobic002G232400 Sobic002G232400 Sobic003G444200--Sobic002G232400 Sobic003G444200--Sobic002G271300 Sobic008G084100 Sobic008G084100 Sobic003G444200--Sobic008G084100 Sobic002G111500 Sobic002G111500 Sobic003G444200--Sobic002G111500
Octagon: transcription factors


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