Gene annotation
Transcriptome id Sobic.004G185200.1
Synonym HB4, Sb04g023410, ATHB-4, ATHB4
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
homeobox associated leucine zipper, putative, expressed
UniProt A0A1Z5RNK7
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF192
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G06710 : homeobox from Arabidopsis thaliana
RAP-DB (Rice) LOC_Os02g35770.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a031666
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G423700 - -
2 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
3 Sobic.002G097000 expressed protein -
4 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
5 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
6 Sobic.005G088700 expressed protein -
7 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.001G200700 expressed protein -
9 Sobic.001G323600 transporter family protein, putative, expressed -
10 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
11 Sobic.005G082860 - K09338: homeobox-leucine zipper protein
12 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
13 Sobic.010G070750 - -
14 Sobic.007G164500 - -
15 Sobic.003G024600 CAMK_KIN1/SNF1/Nim1_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
16 Sobic.002G132500 - -
17 Sobic.009G015500 - -
18 Sobic.001G466450 - -
19 Sobic.001G466450 - -
20 Sobic.001G466450 - -


Gene co-expression network
sample Sobic004G185200 Sobic004G185200 Sobic002G423700 Sobic002G423700 Sobic004G185200--Sobic002G423700 Sobic005G183200 Sobic005G183200 Sobic004G185200--Sobic005G183200 Sobic002G097000 Sobic002G097000 Sobic004G185200--Sobic002G097000 Sobic007G156800 Sobic007G156800 Sobic004G185200--Sobic007G156800 Sobic003G011400 Sobic003G011400 Sobic004G185200--Sobic003G011400 Sobic005G088700 Sobic005G088700 Sobic004G185200--Sobic005G088700 Sobic003G194400 Sobic003G194400 Sobic004G185200--Sobic003G194400 Sobic001G200700 Sobic001G200700 Sobic004G185200--Sobic001G200700 Sobic001G323600 Sobic001G323600 Sobic004G185200--Sobic001G323600 Sobic002G423700--Sobic004G185200 Sobic002G423700--Sobic002G097000 Sobic003G266600 Sobic003G266600 Sobic002G423700--Sobic003G266600 Sobic002G423700--Sobic005G183200 Sobic002G423700--Sobic003G011400 Sobic005G082860 Sobic005G082860 Sobic002G423700--Sobic005G082860 Sobic002G423700--Sobic003G194400 Sobic002G423700--Sobic001G200700 Sobic009G046200 Sobic009G046200 Sobic002G423700--Sobic009G046200 Sobic005G183200--Sobic003G194400 Sobic005G183200--Sobic003G011400 Sobic006G114700 Sobic006G114700 Sobic005G183200--Sobic006G114700 Sobic010G101300 Sobic010G101300 Sobic005G183200--Sobic010G101300 Sobic005G183200--Sobic001G200700 Sobic003G292400 Sobic003G292400 Sobic005G183200--Sobic003G292400 Sobic009G116700 Sobic009G116700 Sobic005G183200--Sobic009G116700 Sobic005G183200--Sobic005G088700 Sobic005G183200--Sobic001G323600 Sobic001G373600 Sobic001G373600 Sobic002G097000--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic002G097000--Sobic001G466450 Sobic007G164500 Sobic007G164500 Sobic002G097000--Sobic007G164500 Sobic004G108800 Sobic004G108800 Sobic007G156800--Sobic004G108800 Sobic005G064900 Sobic005G064900 Sobic007G156800--Sobic005G064900 Sobic003G015200 Sobic003G015200 Sobic007G156800--Sobic003G015200 Sobic008G108950 Sobic008G108950 Sobic007G156800--Sobic008G108950 Sobic007G156800--Sobic005G088700 Sobic007G038500 Sobic007G038500 Sobic007G156800--Sobic007G038500 Sobic005G089200 Sobic005G089200 Sobic007G156800--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic007G156800--Sobic005G149600 Sobic009G015500 Sobic009G015500 Sobic007G156800--Sobic009G015500 Sobic003G011400--Sobic001G200700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic005G088700--Sobic001G323600 Sobic005G088700--Sobic001G373600 Sobic005G088700--Sobic003G024600 Sobic005G088700--Sobic007G164500 Sobic005G088700--Sobic001G466450 Sobic003G194400--Sobic010G101300 Sobic003G194400--Sobic003G292400 Sobic003G194400--Sobic001G200700 Sobic004G243300 Sobic004G243300 Sobic003G194400--Sobic004G243300 Sobic003G194400--Sobic003G011400 Sobic003G194400--Sobic005G183200 Sobic003G194400--Sobic006G114700 Sobic001G307000 Sobic001G307000 Sobic003G194400--Sobic001G307000 Sobic004G047900 Sobic004G047900 Sobic003G194400--Sobic004G047900 Sobic001G200700--Sobic003G011400 Sobic001G200700--Sobic003G194400 Sobic001G200700--Sobic003G292400 Sobic001G200700--Sobic010G101300 Sobic002G132500 Sobic002G132500 Sobic001G200700--Sobic002G132500 Sobic001G200700--Sobic009G046200 Sobic006G104000 Sobic006G104000 Sobic001G200700--Sobic006G104000 Sobic001G200700--Sobic005G183200 Sobic001G200700--Sobic009G116700 Sobic001G323600--Sobic001G373600 Sobic001G323600--Sobic007G164500 Sobic001G323600--Sobic003G024600 Sobic001G323600--Sobic005G088700 Sobic001G323600--Sobic001G466450
Octagon: transcription factors


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