Gene annotation
Transcriptome id Sobic.001G452200.1
Synonym RD20, Sb01g042500, CLO-3
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Caleosin-related family protein( (PubMedID : 26759170,(PubMedID : 24597475)
caleosin related protein, putative, expressed
UniProt C5WSN8
Pfam PF05042
Panther DB PTHR31495 PTHR31495:SF3
NCBI CDD -
KEGG Orthology K17991; peroxygenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33380 : Caleosin-related family protein
RAP-DB (Rice) LOC_Os03g12230.1 : caleosin related protein, putative, expressed
MaizeGDB (Corn) Zm00025a001348 , Zm00025a001347
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G452200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G006500 integral membrane protein DUF6 containing protein, expressed -
2 Sobic.003G015200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
3 Sobic.007G058600 O-methyltransferase, putative, expressed K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase
4 Sobic.009G015500 - -
5 Sobic.002G107400 aldehyde oxidase, putative, expressed -
6 Sobic.006G181900 aluminum-activated malate transporter, putative, expressed -
7 Sobic.002G416500 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.010G070750 - -
9 Sobic.004G308300 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.006G142000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.005G064900 cytochrome P450, putative, expressed -
12 Sobic.001G508400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.004G159100 exostosin family domain containing protein, expressed -
14 Sobic.001G323600 transporter family protein, putative, expressed -
15 Sobic.003G307100 serpin domain containing protein, putative, expressed K13963: serpin B
16 Sobic.009G158600 - -
17 Sobic.009G158500 - -
18 Sobic.002G097000 expressed protein -
19 Sobic.010G170300 Os9bglu31 - beta-glucosidase, dhurrinase, similar to G. max hydroxyisourate hydrolase, expressed K01188: beta-glucosidase
20 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -


Gene co-expression network
sample Sobic001G452200 Sobic001G452200 Sobic009G006500 Sobic009G006500 Sobic001G452200--Sobic009G006500 Sobic003G015200 Sobic003G015200 Sobic001G452200--Sobic003G015200 Sobic007G058600 Sobic007G058600 Sobic001G452200--Sobic007G058600 Sobic009G015500 Sobic009G015500 Sobic001G452200--Sobic009G015500 Sobic002G107400 Sobic002G107400 Sobic001G452200--Sobic002G107400 Sobic006G181900 Sobic006G181900 Sobic001G452200--Sobic006G181900 Sobic002G416500 Sobic002G416500 Sobic001G452200--Sobic002G416500 Sobic010G070750 Sobic010G070750 Sobic001G452200--Sobic010G070750 Sobic004G308300 Sobic004G308300 Sobic001G452200--Sobic004G308300 Sobic009G006500--Sobic009G015500 Sobic009G006500--Sobic007G058600 Sobic009G006500--Sobic003G015200 Sobic009G006500--Sobic004G308300 Sobic009G006500--Sobic006G181900 Sobic009G006500--Sobic010G070750 Sobic006G142000 Sobic006G142000 Sobic009G006500--Sobic006G142000 Sobic009G006500--Sobic002G107400 Sobic001G323600 Sobic001G323600 Sobic009G006500--Sobic001G323600 Sobic003G015200--Sobic007G058600 Sobic004G108800 Sobic004G108800 Sobic003G015200--Sobic004G108800 Sobic005G064900 Sobic005G064900 Sobic003G015200--Sobic005G064900 Sobic003G015200--Sobic009G015500 Sobic005G149600 Sobic005G149600 Sobic003G015200--Sobic005G149600 Sobic007G156800 Sobic007G156800 Sobic003G015200--Sobic007G156800 Sobic005G152500 Sobic005G152500 Sobic003G015200--Sobic005G152500 Sobic005G089200 Sobic005G089200 Sobic003G015200--Sobic005G089200 Sobic003G015200--Sobic009G006500 Sobic007G058600--Sobic009G015500 Sobic007G058600--Sobic003G015200 Sobic007G058600--Sobic005G064900 Sobic007G058600--Sobic001G323600 Sobic007G058600--Sobic006G142000 Sobic005G088700 Sobic005G088700 Sobic007G058600--Sobic005G088700 Sobic003G024600 Sobic003G024600 Sobic007G058600--Sobic003G024600 Sobic001G373600 Sobic001G373600 Sobic007G058600--Sobic001G373600 Sobic007G164500 Sobic007G164500 Sobic007G058600--Sobic007G164500 Sobic009G015500--Sobic007G058600 Sobic009G015500--Sobic001G323600 Sobic009G015500--Sobic010G070750 Sobic009G015500--Sobic004G308300 Sobic009G015500--Sobic005G088700 Sobic009G158600 Sobic009G158600 Sobic009G015500--Sobic009G158600 Sobic009G015500--Sobic003G024600 Sobic009G015500--Sobic007G164500 Sobic009G015500--Sobic001G373600 Sobic010G170300 Sobic010G170300 Sobic002G107400--Sobic010G170300 Sobic004G101400 Sobic004G101400 Sobic002G107400--Sobic004G101400 Sobic002G107400--Sobic009G006500 Sobic002G107400--Sobic003G015200 Sobic001G026300 Sobic001G026300 Sobic002G107400--Sobic001G026300 Sobic002G107400--Sobic007G156800 Sobic002G107400--Sobic009G015500 Sobic002G107400--Sobic005G149600 Sobic002G107400--Sobic001G452200 Sobic009G158500 Sobic009G158500 Sobic006G181900--Sobic009G158500 Sobic006G181900--Sobic007G058600 Sobic006G181900--Sobic009G015500 Sobic001G508400 Sobic001G508400 Sobic006G181900--Sobic001G508400 Sobic006G181900--Sobic010G070750 Sobic006G181900--Sobic009G006500 Sobic006G181900--Sobic003G024600 Sobic006G181900--Sobic003G015200 Sobic006G181900--Sobic001G323600 Sobic002G416500--Sobic001G508400 Sobic002G416500--Sobic006G181900 Sobic002G389100 Sobic002G389100 Sobic002G416500--Sobic002G389100 Sobic002G416500--Sobic003G015200 Sobic002G416500--Sobic009G006500 Sobic002G416500--Sobic007G058600 Sobic002G416500--Sobic001G026300 Sobic002G416500--Sobic001G452200 Sobic004G261400 Sobic004G261400 Sobic002G416500--Sobic004G261400 Sobic010G070750--Sobic007G164500 Sobic010G070750--Sobic001G323600 Sobic010G070750--Sobic003G024600 Sobic010G070750--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic010G070750--Sobic001G466450 Sobic004G308300--Sobic007G164500 Sobic004G308300--Sobic001G323600 Sobic004G308300--Sobic003G024600 Sobic004G308300--Sobic010G070750 Sobic004G308300--Sobic001G373600 Sobic004G308300--Sobic001G466450
Octagon: transcription factors


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