Gene annotation
| Transcriptome id | Sobic.003G307100.1 |
|---|---|
| Synonym | Sb03g035570 |
| Functional annotation | serpin domain containing protein, putative, expressed |
| UniProt | C5XKX2 |
| Pfam | PF00079 |
| Panther DB | PTHR11461 PTHR11461:SF178 |
| NCBI CDD | KOG2392; Serpin |
| KEGG Orthology | K13963; serpin B |
| Gene Ontology | GO:0005615; extracellular space |
Orthologs (automatic annotation)
| TAIR | AT1G47710 : Serine protease inhibitor (SERPIN) family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g56010.1 : serpin domain containing protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQK09912 , KQJ89272 |
| Barley | - |
| Wheat | TraesCS3A02G300700 , TraesCS3B02G335800 , TraesCS3D02G301100 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G232300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed | - |
| 2 | Sobic.001G452200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Caleosin-related family protein("PubMedID : 26759170,PubMedID : 24597475")@caleosin related protein, putative, expressed | K17991: peroxygenase |
| 3 | Sobic.001G508400 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 4 | Sobic.009G158500 | - | - |
| 5 | Sobic.002G416500 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 6 | Sobic.006G181900 | aluminum-activated malate transporter, putative, expressed | - |
| 7 | Sobic.001G409400 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@OsRCI2-5 - Putative low temperature and salt responsive protein, expressed | - |
| 8 | Sobic.004G101400 | Up-reguralion under drought(PubMedID : 24916767)@HSF-type DNA-binding domain containing protein, expressed | K09419: heat shock transcription factor, other eukaryote |
| 9 | Sobic.002G389100 | cytochrome P450 72A1, putative, expressed | - |
| 10 | Sobic.009G006500 | integral membrane protein DUF6 containing protein, expressed | - |
| 11 | Sobic.007G058600 | O-methyltransferase, putative, expressed | K13066: E2.1.1.68, caffeic acid 3-O-methyltransferase |
| 12 | Sobic.006G142000 | MYB family transcription factor, putative, expressed | K09422: transcription factor MYB, plant |
| 13 | Sobic.004G159100 | exostosin family domain containing protein, expressed | - |
| 14 | Sobic.009G015500 | - | - |
| 15 | Sobic.006G012800 | Up-reguralion under heat(PubMedID : 24916767)@acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed | K00232: E1.3.3.6, ACOX1, acyl-CoA oxidase |
| 16 | Sobic.002G107400 | aldehyde oxidase, putative, expressed | - |
| 17 | Sobic.004G222700 | Photosystem II calcium ion binding protein (Os)(PubMedID : 27208977)@expressed protein | - |
| 18 | Sobic.003G015200 | Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed | K15382: SLC50A, solute carrier family 50 (sugar transporter) |
| 19 | Sobic.009G158600 | - | - |
| 20 | Sobic.010G070750 | - | - |
Gene co-expression network
Octagon: transcription factors
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