Gene annotation
Transcriptome id Sobic.006G012800.3,Sobic.006G012800.1,Sobic.006G012800.2
Synonym ACX4, ATSCX, ATG6, Sb06g001260
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed
UniProt A0A1B6PJE5 , A0A1Z5RBK8 , A0A1B6PJE1
Pfam PF02770 PF02771 PF00441
Panther DB PTHR10909 PTHR10909:SF310
NCBI CDD -
KEGG Orthology K00232; E1.3.3.6, ACOX1, acyl-CoA oxidase
Gene Ontology GO:0003995; acyl-CoA dehydrogenase activity GO:0016627oxidoreductase activity, acting on the CH-CH group of donors GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G51840 : acyl-CoA oxidase 4
RAP-DB (Rice) LOC_Os05g07090.1 : acyl-coenzyme A dehydrogenase, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a033030
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G158500 - -
2 Sobic.001G508400 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.002G389100 cytochrome P450 72A1, putative, expressed -
4 Sobic.006G074200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)"(PubMedID : 24655390)@LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.002G416500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.004G185100 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
7 Sobic.002G318100 expressed protein -
8 Sobic.001G364400 cytochrome P450, putative, expressed -
9 Sobic.006G181900 aluminum-activated malate transporter, putative, expressed -
10 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
11 Sobic.009G006500 integral membrane protein DUF6 containing protein, expressed -
12 Sobic.002G416900 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.004G261400 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
14 Sobic.009G015500 - -
15 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
16 Sobic.005G066000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
17 Sobic.002G049400 LTPL76 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.009G073800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.001G114300 - -
20 Sobic.003G307100 serpin domain containing protein, putative, expressed K13963: serpin B


Gene co-expression network
sample Sobic006G012800 Sobic006G012800 Sobic009G158500 Sobic009G158500 Sobic006G012800--Sobic009G158500 Sobic001G508400 Sobic001G508400 Sobic006G012800--Sobic001G508400 Sobic002G389100 Sobic002G389100 Sobic006G012800--Sobic002G389100 Sobic006G074200 Sobic006G074200 Sobic006G012800--Sobic006G074200 Sobic002G416500 Sobic002G416500 Sobic006G012800--Sobic002G416500 Sobic004G185100 Sobic004G185100 Sobic006G012800--Sobic004G185100 Sobic002G318100 Sobic002G318100 Sobic006G012800--Sobic002G318100 Sobic001G364400 Sobic001G364400 Sobic006G012800--Sobic001G364400 Sobic006G181900 Sobic006G181900 Sobic006G012800--Sobic006G181900 Sobic009G158500--Sobic006G181900 Sobic009G158500--Sobic001G508400 Sobic009G015500 Sobic009G015500 Sobic009G158500--Sobic009G015500 Sobic009G006500 Sobic009G006500 Sobic009G158500--Sobic009G006500 Sobic009G158500--Sobic006G012800 Sobic001G101600 Sobic001G101600 Sobic009G158500--Sobic001G101600 Sobic009G158500--Sobic002G416500 Sobic007G058600 Sobic007G058600 Sobic009G158500--Sobic007G058600 Sobic010G070750 Sobic010G070750 Sobic009G158500--Sobic010G070750 Sobic001G508400--Sobic009G158500 Sobic001G508400--Sobic006G181900 Sobic001G508400--Sobic002G416500 Sobic001G508400--Sobic009G015500 Sobic001G508400--Sobic002G389100 Sobic009G158600 Sobic009G158600 Sobic001G508400--Sobic009G158600 Sobic001G508400--Sobic009G006500 Sobic001G508400--Sobic007G058600 Sobic001G508400--Sobic006G012800 Sobic002G389100--Sobic001G508400 Sobic002G389100--Sobic002G416500 Sobic004G261400 Sobic004G261400 Sobic002G389100--Sobic004G261400 Sobic009G073800 Sobic009G073800 Sobic002G389100--Sobic009G073800 Sobic002G389100--Sobic006G012800 Sobic002G307600 Sobic002G307600 Sobic002G389100--Sobic002G307600 Sobic010G067400 Sobic010G067400 Sobic002G389100--Sobic010G067400 Sobic004G126700 Sobic004G126700 Sobic002G389100--Sobic004G126700 Sobic002G389100--Sobic009G158500 Sobic006G074200--Sobic001G364400 Sobic007G170300 Sobic007G170300 Sobic006G074200--Sobic007G170300 Sobic005G066000 Sobic005G066000 Sobic006G074200--Sobic005G066000 Sobic006G183900 Sobic006G183900 Sobic006G074200--Sobic006G183900 Sobic003G287200 Sobic003G287200 Sobic006G074200--Sobic003G287200 Sobic008G172500 Sobic008G172500 Sobic006G074200--Sobic008G172500 Sobic002G365500 Sobic002G365500 Sobic006G074200--Sobic002G365500 Sobic002G365600 Sobic002G365600 Sobic006G074200--Sobic002G365600 Sobic010G110800 Sobic010G110800 Sobic006G074200--Sobic010G110800 Sobic002G416500--Sobic001G508400 Sobic002G416500--Sobic006G181900 Sobic002G416500--Sobic002G389100 Sobic003G015200 Sobic003G015200 Sobic002G416500--Sobic003G015200 Sobic002G416500--Sobic009G006500 Sobic002G416500--Sobic007G058600 Sobic001G026300 Sobic001G026300 Sobic002G416500--Sobic001G026300 Sobic001G452200 Sobic001G452200 Sobic002G416500--Sobic001G452200 Sobic002G416500--Sobic004G261400 Sobic009G187200 Sobic009G187200 Sobic004G185100--Sobic009G187200 Sobic002G049400 Sobic002G049400 Sobic004G185100--Sobic002G049400 Sobic003G026400 Sobic003G026400 Sobic004G185100--Sobic003G026400 Sobic002G416900 Sobic002G416900 Sobic004G185100--Sobic002G416900 Sobic004G352301 Sobic004G352301 Sobic004G185100--Sobic004G352301 Sobic004G185100--Sobic002G318100 Sobic004G185100--Sobic001G364400 Sobic003G016100 Sobic003G016100 Sobic004G185100--Sobic003G016100 Sobic004G185100--Sobic010G067400 Sobic003G079400 Sobic003G079400 Sobic002G318100--Sobic003G079400 Sobic002G318100--Sobic009G187200 Sobic001G082600 Sobic001G082600 Sobic002G318100--Sobic001G082600 Sobic003G316000 Sobic003G316000 Sobic002G318100--Sobic003G316000 Sobic008G106700 Sobic008G106700 Sobic002G318100--Sobic008G106700 Sobic004G046200 Sobic004G046200 Sobic002G318100--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic002G318100--Sobic006G044100 Sobic005G168800 Sobic005G168800 Sobic002G318100--Sobic005G168800 Sobic002G318100--Sobic003G016100 Sobic001G364400--Sobic002G365600 Sobic001G364400--Sobic006G074200 Sobic001G364400--Sobic002G365500 Sobic003G269500 Sobic003G269500 Sobic001G364400--Sobic003G269500 Sobic001G364400--Sobic006G183900 Sobic001G364400--Sobic008G172500 Sobic010G271200 Sobic010G271200 Sobic001G364400--Sobic010G271200 Sobic006G150700 Sobic006G150700 Sobic001G364400--Sobic006G150700 Sobic001G364400--Sobic002G318100 Sobic006G181900--Sobic009G158500 Sobic006G181900--Sobic007G058600 Sobic006G181900--Sobic009G015500 Sobic006G181900--Sobic001G508400 Sobic006G181900--Sobic010G070750 Sobic006G181900--Sobic009G006500 Sobic003G024600 Sobic003G024600 Sobic006G181900--Sobic003G024600 Sobic006G181900--Sobic003G015200 Sobic001G323600 Sobic001G323600 Sobic006G181900--Sobic001G323600
Octagon: transcription factors


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