Gene annotation
Transcriptome id Sobic.004G038200.1
Synonym
Functional annotation -
UniProt A0A194YMP1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
2 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
3 Sobic.001G163800 No apical meristem protein, putative, expressed -
4 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
5 Sobic.004G193500 expressed protein -
6 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
7 Sobic.002G030800 app1, putative, expressed -
8 Sobic.003G287200 WRKY23, expressed -
9 Sobic.002G254900 membrane protein, putative, expressed -
10 Sobic.004G165300 Cupin domain containing protein, expressed -
11 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
12 Sobic.008G133000 expressed protein -
13 Sobic.003G296500 leucine rich repeat family protein, putative, expressed -
14 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
15 Sobic.003G287450 - -
16 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
17 Sobic.009G122300 white-brown complex homolog protein 16, putative, expressed -
18 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
19 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
20 Sobic.004G126700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase


Gene co-expression network
sample Sobic004G038200 Sobic004G038200 Sobic010G220300 Sobic010G220300 Sobic004G038200--Sobic010G220300 Sobic002G094600 Sobic002G094600 Sobic004G038200--Sobic002G094600 Sobic001G163800 Sobic001G163800 Sobic004G038200--Sobic001G163800 Sobic009G250100 Sobic009G250100 Sobic004G038200--Sobic009G250100 Sobic004G193500 Sobic004G193500 Sobic004G038200--Sobic004G193500 Sobic001G002800 Sobic001G002800 Sobic004G038200--Sobic001G002800 Sobic002G030800 Sobic002G030800 Sobic004G038200--Sobic002G030800 Sobic003G287200 Sobic003G287200 Sobic004G038200--Sobic003G287200 Sobic002G254900 Sobic002G254900 Sobic004G038200--Sobic002G254900 Sobic007G041600 Sobic007G041600 Sobic010G220300--Sobic007G041600 Sobic007G020700 Sobic007G020700 Sobic010G220300--Sobic007G020700 Sobic006G009500 Sobic006G009500 Sobic010G220300--Sobic006G009500 Sobic004G312500 Sobic004G312500 Sobic010G220300--Sobic004G312500 Sobic009G079900 Sobic009G079900 Sobic010G220300--Sobic009G079900 Sobic001G402400 Sobic001G402400 Sobic010G220300--Sobic001G402400 Sobic005G219700 Sobic005G219700 Sobic010G220300--Sobic005G219700 Sobic005G071900 Sobic005G071900 Sobic010G220300--Sobic005G071900 Sobic008G133000 Sobic008G133000 Sobic010G220300--Sobic008G133000 Sobic004G165300 Sobic004G165300 Sobic002G094600--Sobic004G165300 Sobic001G471800 Sobic001G471800 Sobic002G094600--Sobic001G471800 Sobic003G236600 Sobic003G236600 Sobic002G094600--Sobic003G236600 Sobic003G183300 Sobic003G183300 Sobic002G094600--Sobic003G183300 Sobic009G008800 Sobic009G008800 Sobic002G094600--Sobic009G008800 Sobic001G484000 Sobic001G484000 Sobic002G094600--Sobic001G484000 Sobic002G094600--Sobic004G193500 Sobic002G146000 Sobic002G146000 Sobic002G094600--Sobic002G146000 Sobic006G282300 Sobic006G282300 Sobic002G094600--Sobic006G282300 Sobic005G022500 Sobic005G022500 Sobic001G163800--Sobic005G022500 Sobic001G163800--Sobic004G193500 Sobic001G250100 Sobic001G250100 Sobic001G163800--Sobic001G250100 Sobic001G163800--Sobic003G287200 Sobic001G163800--Sobic008G133000 Sobic001G163800--Sobic001G002800 Sobic001G503000 Sobic001G503000 Sobic001G163800--Sobic001G503000 Sobic001G163800--Sobic001G471800 Sobic001G163800--Sobic009G250100 Sobic009G250100--Sobic001G163800 Sobic008G168100 Sobic008G168100 Sobic009G250100--Sobic008G168100 Sobic004G054000 Sobic004G054000 Sobic009G250100--Sobic004G054000 Sobic009G059500 Sobic009G059500 Sobic009G250100--Sobic009G059500 Sobic010G131400 Sobic010G131400 Sobic009G250100--Sobic010G131400 Sobic008G062900 Sobic008G062900 Sobic009G250100--Sobic008G062900 Sobic009G250100--Sobic005G022500 Sobic003G294100 Sobic003G294100 Sobic009G250100--Sobic003G294100 Sobic009G250100--Sobic004G038200 Sobic004G193500--Sobic002G146000 Sobic001G274400 Sobic001G274400 Sobic004G193500--Sobic001G274400 Sobic007G073000 Sobic007G073000 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic003G255600 Sobic003G255600 Sobic004G193500--Sobic003G255600 Sobic006G135300 Sobic006G135300 Sobic004G193500--Sobic006G135300 Sobic006G092700 Sobic006G092700 Sobic004G193500--Sobic006G092700 Sobic006G224500 Sobic006G224500 Sobic004G193500--Sobic006G224500 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic007G090472 Sobic007G090472 Sobic001G002800--Sobic007G090472 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic006G209000 Sobic006G209000 Sobic001G002800--Sobic006G209000 Sobic010G096700 Sobic010G096700 Sobic001G002800--Sobic010G096700 Sobic001G002800--Sobic007G073000 Sobic001G506600 Sobic001G506600 Sobic001G002800--Sobic001G506600 Sobic005G127200 Sobic005G127200 Sobic002G030800--Sobic005G127200 Sobic010G093300 Sobic010G093300 Sobic002G030800--Sobic010G093300 Sobic001G068500 Sobic001G068500 Sobic002G030800--Sobic001G068500 Sobic002G030800--Sobic001G471800 Sobic001G413700 Sobic001G413700 Sobic002G030800--Sobic001G413700 Sobic002G030800--Sobic001G250100 Sobic003G239100 Sobic003G239100 Sobic002G030800--Sobic003G239100 Sobic001G059600 Sobic001G059600 Sobic002G030800--Sobic001G059600 Sobic002G030800--Sobic006G224500 Sobic006G183900 Sobic006G183900 Sobic003G287200--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic003G287200--Sobic006G229100 Sobic003G287200--Sobic001G002800 Sobic001G360500 Sobic001G360500 Sobic003G287200--Sobic001G360500 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic003G287200--Sobic010G096700 Sobic007G170300 Sobic007G170300 Sobic003G287200--Sobic007G170300 Sobic006G117500 Sobic006G117500 Sobic003G287200--Sobic006G117500 Sobic002G254900--Sobic001G002800 Sobic002G254900--Sobic010G096700 Sobic010G180100 Sobic010G180100 Sobic002G254900--Sobic010G180100 Sobic004G047600 Sobic004G047600 Sobic002G254900--Sobic004G047600 Sobic001G360700 Sobic001G360700 Sobic002G254900--Sobic001G360700 Sobic002G254900--Sobic001G503000 Sobic002G254900--Sobic001G506600 Sobic002G254900--Sobic007G090472 Sobic002G167600 Sobic002G167600 Sobic002G254900--Sobic002G167600
Octagon: transcription factors


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