Gene annotation
Transcriptome id Sobic.001G316000.1
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5S8U1
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF93
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G01540 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g38920.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a003130 , Zm00025a037301
Brachypodium KQK06064
Barley HORVU1Hr1G049470.15 , HORVU1Hr1G049470.14 , HORVU1Hr1G049470.17 , HORVU1Hr1G049470.16 , HORVU1Hr1G049470.11 , HORVU1Hr1G049470.13 , HORVU1Hr1G049470.12 , HORVU1Hr1G049470.19 , HORVU1Hr1G049470.18 , HORVU1Hr1G049470.3 , HORVU1Hr1G049470.2 , HORVU1Hr1G049470.5 , HORVU1Hr1G049470.7 , HORVU1Hr1G049470.6 , HORVU1Hr1G049470.9 , HORVU1Hr1G049470.8 , HORVU1Hr1G049470.20 , HORVU1Hr1G049470.21 , HORVU1Hr1G049470.22
Wheat TraesCS1A02G272100 , TraesCS1A02G272100 , TraesCS1D02G272800 , TraesCS1B02G282100 , TraesCS1B02G193000 , TraesCS1A02G185100 , TraesCS1D02G191800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
2 Sobic.008G097500 expressed protein -
3 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
4 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
5 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
6 Sobic.007G001900 harpin-induced protein 1 domain containing protein, expressed -
7 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
8 Sobic.010G090500 expressed protein -
9 Sobic.003G134900 plastocyanin-like domain containing protein, putative, expressed -
10 Sobic.004G274800 protein transport protein-related, putative, expressed -
11 Sobic.002G276600 endoglucanase, putative, expressed -
12 Sobic.010G112800 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
13 Sobic.006G083700 expressed protein -
14 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
15 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
16 Sobic.001G037400 expressed protein -
17 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
18 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
20 Sobic.003G198500 XIK, putative, expressed K10357: myosin V


Gene co-expression network
sample Sobic001G316000 Sobic001G316000 Sobic003G161500 Sobic003G161500 Sobic001G316000--Sobic003G161500 Sobic008G097500 Sobic008G097500 Sobic001G316000--Sobic008G097500 Sobic010G022400 Sobic010G022400 Sobic001G316000--Sobic010G022400 Sobic009G226900 Sobic009G226900 Sobic001G316000--Sobic009G226900 Sobic004G243800 Sobic004G243800 Sobic001G316000--Sobic004G243800 Sobic007G001900 Sobic007G001900 Sobic001G316000--Sobic007G001900 Sobic001G336700 Sobic001G336700 Sobic001G316000--Sobic001G336700 Sobic010G090500 Sobic010G090500 Sobic001G316000--Sobic010G090500 Sobic003G134900 Sobic003G134900 Sobic001G316000--Sobic003G134900 Sobic004G274800 Sobic004G274800 Sobic003G161500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic003G161500--Sobic009G206500 Sobic006G281400 Sobic006G281400 Sobic003G161500--Sobic006G281400 Sobic002G318300 Sobic002G318300 Sobic003G161500--Sobic002G318300 Sobic003G052100 Sobic003G052100 Sobic003G161500--Sobic003G052100 Sobic008G032800 Sobic008G032800 Sobic003G161500--Sobic008G032800 Sobic007G139500 Sobic007G139500 Sobic003G161500--Sobic007G139500 Sobic006G109500 Sobic006G109500 Sobic003G161500--Sobic006G109500 Sobic003G369200 Sobic003G369200 Sobic003G161500--Sobic003G369200 Sobic008G097500--Sobic010G022400 Sobic004G034200 Sobic004G034200 Sobic008G097500--Sobic004G034200 Sobic008G097500--Sobic003G134900 Sobic008G097500--Sobic001G316000 Sobic002G312700 Sobic002G312700 Sobic008G097500--Sobic002G312700 Sobic003G056000 Sobic003G056000 Sobic008G097500--Sobic003G056000 Sobic003G286800 Sobic003G286800 Sobic008G097500--Sobic003G286800 Sobic003G198500 Sobic003G198500 Sobic008G097500--Sobic003G198500 Sobic008G097500--Sobic001G336700 Sobic001G406700 Sobic001G406700 Sobic010G022400--Sobic001G406700 Sobic003G387500 Sobic003G387500 Sobic010G022400--Sobic003G387500 Sobic010G022400--Sobic001G336700 Sobic010G180100 Sobic010G180100 Sobic010G022400--Sobic010G180100 Sobic010G022400--Sobic009G226900 Sobic009G170500 Sobic009G170500 Sobic010G022400--Sobic009G170500 Sobic002G167600 Sobic002G167600 Sobic010G022400--Sobic002G167600 Sobic005G107500 Sobic005G107500 Sobic010G022400--Sobic005G107500 Sobic002G254900 Sobic002G254900 Sobic010G022400--Sobic002G254900 Sobic003G062000 Sobic003G062000 Sobic009G226900--Sobic003G062000 Sobic001G224300 Sobic001G224300 Sobic009G226900--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic009G226900--Sobic003G387500 Sobic006G036400 Sobic006G036400 Sobic009G226900--Sobic006G036400 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic001G437500 Sobic001G437500 Sobic004G243800--Sobic001G437500 Sobic001G037400 Sobic001G037400 Sobic004G243800--Sobic001G037400 Sobic001G196000 Sobic001G196000 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic009G211800 Sobic009G211800 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic010G112800 Sobic010G112800 Sobic007G001900--Sobic010G112800 Sobic009G144200 Sobic009G144200 Sobic007G001900--Sobic009G144200 Sobic007G001900--Sobic002G276600 Sobic008G055000 Sobic008G055000 Sobic007G001900--Sobic008G055000 Sobic007G001900--Sobic010G090500 Sobic007G001900--Sobic009G226900 Sobic007G001900--Sobic004G243800 Sobic007G001900--Sobic001G316000 Sobic003G098500 Sobic003G098500 Sobic007G001900--Sobic003G098500 Sobic002G082300 Sobic002G082300 Sobic001G336700--Sobic002G082300 Sobic001G336700--Sobic010G022400 Sobic001G336700--Sobic009G226900 Sobic001G336700--Sobic002G205500 Sobic006G226200 Sobic006G226200 Sobic001G336700--Sobic006G226200 Sobic001G336700--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic001G336700--Sobic009G048000 Sobic001G336700--Sobic005G087200 Sobic001G336700--Sobic003G296400 Sobic001G159800 Sobic001G159800 Sobic010G090500--Sobic001G159800 Sobic010G120300 Sobic010G120300 Sobic010G090500--Sobic010G120300 Sobic010G090500--Sobic009G206500 Sobic009G079100 Sobic009G079100 Sobic010G090500--Sobic009G079100 Sobic010G090500--Sobic001G437500 Sobic006G267500 Sobic006G267500 Sobic010G090500--Sobic006G267500 Sobic001G073150 Sobic001G073150 Sobic010G090500--Sobic001G073150 Sobic009G061000 Sobic009G061000 Sobic010G090500--Sobic009G061000 Sobic009G125900 Sobic009G125900 Sobic010G090500--Sobic009G125900 Sobic010G243000 Sobic010G243000 Sobic003G134900--Sobic010G243000 Sobic003G134900--Sobic009G144200 Sobic005G116500 Sobic005G116500 Sobic003G134900--Sobic005G116500 Sobic009G221900 Sobic009G221900 Sobic003G134900--Sobic009G221900 Sobic009G232200 Sobic009G232200 Sobic003G134900--Sobic009G232200 Sobic003G136600 Sobic003G136600 Sobic003G134900--Sobic003G136600 Sobic004G257700 Sobic004G257700 Sobic003G134900--Sobic004G257700 Sobic009G251100 Sobic009G251100 Sobic003G134900--Sobic009G251100 Sobic003G134900--Sobic008G097500
Octagon: transcription factors


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