Gene annotation
Transcriptome id Sobic.001G037400.1
Synonym Sb01g003440
Functional annotation expressed protein
UniProt C5WV40
Pfam PF00560 PF08263 PF13855 PF07714
Panther DB PTHR27008 PTHR27008:SF9
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G67510 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os12g13300.1 : expressed protein
MaizeGDB (Corn) Zm00025a054541 , Zm00025a012607
Brachypodium KQJ88647 , KQJ91772 , PNT63706 , PNT63704 , PNT63705
Barley HORVU4Hr1G012420.3 , HORVU4Hr1G012420.2 , HORVU4Hr1G012420.6 , HORVU4Hr1G012420.5 , HORVU4Hr1G012420.4 , HORVU2Hr1G102790.5 , HORVU2Hr1G102790.4 , HORVU2Hr1G102790.7 , HORVU2Hr1G102790.6 , HORVU2Hr1G102790.1 , HORVU2Hr1G102790.3 , HORVU2Hr1G102790.2
Wheat TraesCS2D02G443200 , TraesCS4B02G074700 , TraesCS4A02G240200 , TraesCS2B02G465200 , TraesCS4D02G073300 , TraesCS2A02G444000 , TraesCS2A02G444000
Populus -


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cDNA sequences
Sobic.001G037400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
2 Sobic.008G039800 rhoGAP domain containing protein, expressed -
3 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
4 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
5 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
7 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
8 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
9 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
10 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
11 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
12 Sobic.005G130700 expressed protein -
13 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
14 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
15 Sobic.004G150800 expressed protein -
16 Sobic.001G285200 protein transport protein-related, putative, expressed -
17 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
18 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
19 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
20 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -


Gene co-expression network
sample Sobic001G037400 Sobic001G037400 Sobic004G243800 Sobic004G243800 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic001G037400--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic001G037400--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G196000 Sobic001G196000 Sobic001G037400--Sobic001G196000 Sobic003G006100 Sobic003G006100 Sobic001G037400--Sobic003G006100 Sobic009G211800 Sobic009G211800 Sobic001G037400--Sobic009G211800 Sobic001G437500 Sobic001G437500 Sobic004G243800--Sobic001G437500 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic008G039800--Sobic003G277200 Sobic008G039800--Sobic001G037400 Sobic009G242501 Sobic009G242501 Sobic008G039800--Sobic009G242501 Sobic001G285200 Sobic001G285200 Sobic008G039800--Sobic001G285200 Sobic010G216600 Sobic010G216600 Sobic008G039800--Sobic010G216600 Sobic008G039800--Sobic009G211800 Sobic008G096200 Sobic008G096200 Sobic008G039800--Sobic008G096200 Sobic003G013000 Sobic003G013000 Sobic008G039800--Sobic003G013000 Sobic008G039800--Sobic001G196000 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic003G277200--Sobic001G037400 Sobic005G130700 Sobic005G130700 Sobic003G419600--Sobic005G130700 Sobic010G007000 Sobic010G007000 Sobic003G419600--Sobic010G007000 Sobic003G419600--Sobic005G110600 Sobic006G062300 Sobic006G062300 Sobic003G419600--Sobic006G062300 Sobic003G419600--Sobic001G037400 Sobic003G419600--Sobic003G277200 Sobic007G111700 Sobic007G111700 Sobic003G419600--Sobic007G111700 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100 Sobic005G110600--Sobic005G130700 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic001G140800 Sobic001G140800 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic001G484000 Sobic001G484000 Sobic005G110600--Sobic001G484000 Sobic004G288500--Sobic001G037400 Sobic009G134000 Sobic009G134000 Sobic004G288500--Sobic009G134000 Sobic004G288500--Sobic005G110600 Sobic001G253900 Sobic001G253900 Sobic004G288500--Sobic001G253900 Sobic001G451800 Sobic001G451800 Sobic004G288500--Sobic001G451800 Sobic004G288500--Sobic003G277200 Sobic004G288500--Sobic003G419600 Sobic004G288500--Sobic001G140800 Sobic004G288500--Sobic005G130700 Sobic001G196000--Sobic001G437500 Sobic007G139500 Sobic007G139500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic009G206500 Sobic009G206500 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G159800 Sobic001G159800 Sobic001G196000--Sobic001G159800 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic003G006100--Sobic001G140800 Sobic004G150800 Sobic004G150800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic006G096500 Sobic006G096500 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400 Sobic009G211800--Sobic004G243800 Sobic009G211800--Sobic008G039800 Sobic009G211800--Sobic003G277200 Sobic009G211800--Sobic001G037400 Sobic009G211800--Sobic002G045200 Sobic004G168700 Sobic004G168700 Sobic009G211800--Sobic004G168700 Sobic001G201000 Sobic001G201000 Sobic009G211800--Sobic001G201000 Sobic007G107950 Sobic007G107950 Sobic009G211800--Sobic007G107950 Sobic010G211800 Sobic010G211800 Sobic009G211800--Sobic010G211800
Octagon: transcription factors


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