Gene annotation
Transcriptome id Sobic.004G150800.1
Synonym Sb04g020060
Functional annotation expressed protein
UniProt A0A194YPU5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a020362
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
2 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
3 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
4 Sobic.001G037400 expressed protein -
5 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.004G297950 - -
8 Sobic.005G130600 expressed protein -
9 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
10 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
11 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
12 Sobic.005G018900 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
13 Sobic.002G064600 expressed protein -
14 Sobic.002G028500 app1, putative, expressed -
15 Sobic.003G272900 - -
16 Sobic.007G014400 NB-ARC domain containing protein, expressed -
17 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
18 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
19 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
20 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -


Gene co-expression network
sample Sobic004G150800 Sobic004G150800 Sobic006G096500 Sobic006G096500 Sobic004G150800--Sobic006G096500 Sobic005G087400 Sobic005G087400 Sobic004G150800--Sobic005G087400 Sobic003G006100 Sobic003G006100 Sobic004G150800--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic004G150800--Sobic001G037400 Sobic005G110600 Sobic005G110600 Sobic004G150800--Sobic005G110600 Sobic001G140800 Sobic001G140800 Sobic004G150800--Sobic001G140800 Sobic004G297950 Sobic004G297950 Sobic004G150800--Sobic004G297950 Sobic005G130600 Sobic005G130600 Sobic004G150800--Sobic005G130600 Sobic003G419600 Sobic003G419600 Sobic004G150800--Sobic003G419600 Sobic006G096500--Sobic004G150800 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic003G269100 Sobic003G269100 Sobic006G096500--Sobic003G269100 Sobic006G096500--Sobic001G140800 Sobic006G096500--Sobic003G006100 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic001G208600 Sobic001G208600 Sobic006G096500--Sobic001G208600 Sobic005G087400--Sobic001G140800 Sobic005G087400--Sobic004G150800 Sobic005G087400--Sobic006G096500 Sobic001G388000 Sobic001G388000 Sobic005G087400--Sobic001G388000 Sobic001G129600 Sobic001G129600 Sobic005G087400--Sobic001G129600 Sobic003G272900 Sobic003G272900 Sobic005G087400--Sobic003G272900 Sobic005G145100 Sobic005G145100 Sobic005G087400--Sobic005G145100 Sobic005G087400--Sobic005G110600 Sobic005G087400--Sobic003G006100 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic003G006100--Sobic001G140800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400 Sobic004G243800 Sobic004G243800 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic001G037400--Sobic003G277200 Sobic001G037400--Sobic003G419600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G196000 Sobic001G196000 Sobic001G037400--Sobic001G196000 Sobic001G037400--Sobic003G006100 Sobic009G211800 Sobic009G211800 Sobic001G037400--Sobic009G211800 Sobic005G130700 Sobic005G130700 Sobic005G110600--Sobic005G130700 Sobic006G062300 Sobic006G062300 Sobic005G110600--Sobic006G062300 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic005G110600--Sobic003G419600 Sobic010G133932 Sobic010G133932 Sobic005G110600--Sobic010G133932 Sobic010G007000 Sobic010G007000 Sobic005G110600--Sobic010G007000 Sobic005G110600--Sobic003G269100 Sobic001G484000 Sobic001G484000 Sobic005G110600--Sobic001G484000 Sobic001G140800--Sobic005G110600 Sobic001G140800--Sobic001G388000 Sobic001G140800--Sobic005G145100 Sobic001G140800--Sobic010G133932 Sobic001G140800--Sobic005G087400 Sobic001G140800--Sobic001G129600 Sobic001G140800--Sobic005G130700 Sobic001G140800--Sobic001G484000 Sobic001G140800--Sobic006G062300 Sobic004G297950--Sobic003G269100 Sobic004G297950--Sobic005G130600 Sobic003G321400 Sobic003G321400 Sobic004G297950--Sobic003G321400 Sobic004G297950--Sobic005G110600 Sobic005G047100 Sobic005G047100 Sobic004G297950--Sobic005G047100 Sobic001G099600 Sobic001G099600 Sobic004G297950--Sobic001G099600 Sobic001G264400 Sobic001G264400 Sobic004G297950--Sobic001G264400 Sobic005G052500 Sobic005G052500 Sobic004G297950--Sobic005G052500 Sobic004G297950--Sobic001G484000 Sobic005G130600--Sobic004G297950 Sobic005G130600--Sobic003G321400 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic005G130600--Sobic006G096500 Sobic001G046800 Sobic001G046800 Sobic005G130600--Sobic001G046800 Sobic005G130600--Sobic001G099600 Sobic003G419600--Sobic005G130700 Sobic003G419600--Sobic010G007000 Sobic003G419600--Sobic005G110600 Sobic003G419600--Sobic006G062300 Sobic003G419600--Sobic001G037400 Sobic003G419600--Sobic003G277200 Sobic007G111700 Sobic007G111700 Sobic003G419600--Sobic007G111700 Sobic003G419600--Sobic003G006100 Sobic010G116100 Sobic010G116100 Sobic003G419600--Sobic010G116100
Octagon: transcription factors


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