Gene annotation
Transcriptome id Sobic.007G014400.3,Sobic.007G014400.1,Sobic.007G014400.2
Synonym Sb07g001290, RPS3, RPM1
Functional annotation NB-ARC domain containing protein, expressed
UniProt A0A1Z5R8L4 , C5YLZ1 , A0A1Z5R7N6
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF542
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g17014.1 : NB-ARC domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017697
Brachypodium -
Barley -
Wheat TraesCS5D02G554900 , TraesCS2A02G057700 , TraesCS2B02G503900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G018900 phospholipase C, putative, expressed K05857: phosphatidylinositol phospholipase C, delta
2 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
3 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
4 Sobic.004G150800 expressed protein -
5 Sobic.004G266500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
6 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
7 Sobic.005G130600 expressed protein -
8 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
9 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
10 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
11 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.003G419600 disease resistance protein RGA2, putative, expressed -
13 Sobic.005G051600 plant protein of unknown function domain containing protein, expressed -
14 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
15 Sobic.005G130550 - -
16 Sobic.005G130700 expressed protein -
17 Sobic.004G297950 - -
18 Sobic.002G064600 expressed protein -
19 Sobic.009G242501 - -
20 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G014400 Sobic007G014400 Sobic005G018900 Sobic005G018900 Sobic007G014400--Sobic005G018900 Sobic003G006100 Sobic003G006100 Sobic007G014400--Sobic003G006100 Sobic005G087400 Sobic005G087400 Sobic007G014400--Sobic005G087400 Sobic004G150800 Sobic004G150800 Sobic007G014400--Sobic004G150800 Sobic004G266500 Sobic004G266500 Sobic007G014400--Sobic004G266500 Sobic006G096500 Sobic006G096500 Sobic007G014400--Sobic006G096500 Sobic005G130600 Sobic005G130600 Sobic007G014400--Sobic005G130600 Sobic007G012800 Sobic007G012800 Sobic007G014400--Sobic007G012800 Sobic003G277200 Sobic003G277200 Sobic007G014400--Sobic003G277200 Sobic005G018900--Sobic005G130600 Sobic005G018900--Sobic007G014400 Sobic003G419600 Sobic003G419600 Sobic005G018900--Sobic003G419600 Sobic005G018900--Sobic007G012800 Sobic005G110600 Sobic005G110600 Sobic005G018900--Sobic005G110600 Sobic005G130700 Sobic005G130700 Sobic005G018900--Sobic005G130700 Sobic005G051600 Sobic005G051600 Sobic005G018900--Sobic005G051600 Sobic005G018900--Sobic004G150800 Sobic005G018900--Sobic003G277200 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic003G006100--Sobic001G140800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic001G037400 Sobic001G037400 Sobic003G006100--Sobic001G037400 Sobic005G087400--Sobic001G140800 Sobic005G087400--Sobic004G150800 Sobic005G087400--Sobic006G096500 Sobic001G388000 Sobic001G388000 Sobic005G087400--Sobic001G388000 Sobic001G129600 Sobic001G129600 Sobic005G087400--Sobic001G129600 Sobic003G272900 Sobic003G272900 Sobic005G087400--Sobic003G272900 Sobic005G145100 Sobic005G145100 Sobic005G087400--Sobic005G145100 Sobic005G087400--Sobic005G110600 Sobic005G087400--Sobic003G006100 Sobic004G150800--Sobic006G096500 Sobic004G150800--Sobic005G087400 Sobic004G150800--Sobic003G006100 Sobic004G150800--Sobic001G037400 Sobic004G150800--Sobic005G110600 Sobic004G150800--Sobic001G140800 Sobic004G297950 Sobic004G297950 Sobic004G150800--Sobic004G297950 Sobic004G150800--Sobic005G130600 Sobic004G150800--Sobic003G419600 Sobic008G110400 Sobic008G110400 Sobic004G266500--Sobic008G110400 Sobic005G130550 Sobic005G130550 Sobic004G266500--Sobic005G130550 Sobic004G266500--Sobic007G014400 Sobic004G266500--Sobic005G051600 Sobic004G266500--Sobic004G150800 Sobic002G382500 Sobic002G382500 Sobic004G266500--Sobic002G382500 Sobic006G219100 Sobic006G219100 Sobic004G266500--Sobic006G219100 Sobic004G266500--Sobic003G006100 Sobic004G266500--Sobic003G277200 Sobic006G096500--Sobic004G150800 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic003G269100 Sobic003G269100 Sobic006G096500--Sobic003G269100 Sobic006G096500--Sobic001G140800 Sobic006G096500--Sobic003G006100 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic001G208600 Sobic001G208600 Sobic006G096500--Sobic001G208600 Sobic005G130600--Sobic004G297950 Sobic003G321400 Sobic003G321400 Sobic005G130600--Sobic003G321400 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic005G130600--Sobic001G140800 Sobic003G115200 Sobic003G115200 Sobic005G130600--Sobic003G115200 Sobic005G130600--Sobic006G096500 Sobic001G046800 Sobic001G046800 Sobic005G130600--Sobic001G046800 Sobic001G099600 Sobic001G099600 Sobic005G130600--Sobic001G099600 Sobic005G209900 Sobic005G209900 Sobic007G012800--Sobic005G209900 Sobic001G488400 Sobic001G488400 Sobic007G012800--Sobic001G488400 Sobic009G154100 Sobic009G154100 Sobic007G012800--Sobic009G154100 Sobic009G134000 Sobic009G134000 Sobic007G012800--Sobic009G134000 Sobic005G188500 Sobic005G188500 Sobic007G012800--Sobic005G188500 Sobic010G107200 Sobic010G107200 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic006G032800 Sobic006G032800 Sobic007G012800--Sobic006G032800 Sobic007G012800--Sobic003G277200 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic008G039800 Sobic008G039800 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic003G277200--Sobic007G012800 Sobic003G277200--Sobic001G037400
Octagon: transcription factors


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