Gene annotation
Transcriptome id Sobic.006G096500.1
Synonym Sb06g018130, GAD2
Functional annotation glutamate decarboxylase, putative, expressed
UniProt C5Y9A8
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF113
NCBI CDD -
KEGG Orthology K01580; E4.1.1.15, gadB, gadA, glutamate decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT1G65960 : glutamate decarboxylase 2
RAP-DB (Rice) LOC_Os04g37500.1 : glutamate decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a005384 , Zm00025a052950 , Zm00025a007922 , Zm00025a011205 , Zm00025a011196
Brachypodium KQJ98585 , PNT77787 , KQJ82857 , KQK22684 , KQJ82853
Barley HORVU3Hr1G003050.7 , HORVU3Hr1G003050.6 , HORVU3Hr1G003050.5 , HORVU3Hr1G003050.3 , HORVU3Hr1G003050.2 , HORVU3Hr1G003050.1 , HORVU2Hr1G078580.8 , HORVU2Hr1G078580.9 , HORVU2Hr1G078580.2 , HORVU2Hr1G078580.3 , HORVU2Hr1G078580.1 , HORVU2Hr1G078580.6 , HORVU2Hr1G078580.7 , HORVU2Hr1G078580.4 , HORVU2Hr1G078580.5 , HORVU2Hr1G078560.1 , HORVU2Hr1G078560.2 , HORVU2Hr1G078560.3 , HORVU2Hr1G078560.4 , HORVU2Hr1G078560.5 , HORVU2Hr1G078560.6 , HORVU2Hr1G078580.11 , HORVU2Hr1G078580.17 , HORVU2Hr1G078560.7 , HORVU4Hr1G064790.14 , HORVU4Hr1G064790.12 , HORVU4Hr1G064790.13 , HORVU4Hr1G064790.10 , HORVU4Hr1G064790.11 , HORVU4Hr1G008700.9 , HORVU4Hr1G008700.8 , HORVU4Hr1G064790.4 , HORVU4Hr1G064790.5 , HORVU4Hr1G064790.6 , HORVU4Hr1G064790.7 , HORVU4Hr1G064790.1 , HORVU4Hr1G064790.2 , HORVU4Hr1G064790.3 , HORVU4Hr1G008700.1 , HORVU4Hr1G008700.3 , HORVU4Hr1G008700.2 , HORVU4Hr1G008700.5 , HORVU4Hr1G008700.4 , HORVU4Hr1G008700.7 , HORVU4Hr1G008700.6 , HORVU7Hr1G081730.1 , HORVU2Hr1G078580.18 , HORVU2Hr1G078580.10 , HORVU4Hr1G064790.8 , HORVU2Hr1G078580.12 , HORVU2Hr1G078580.13 , HORVU2Hr1G078580.14 , HORVU2Hr1G078580.15 , HORVU2Hr1G078580.16 , HORVU4Hr1G064790.9 , HORVU3Hr1G112860.2 , HORVU3Hr1G112860.1
Wheat TraesCS4A02G075600 , TraesCS3B02G022900 , TraesCS3B02G022900 , TraesCS4B02G231400 , TraesCS3B02G583600 , TraesCS2D02G313500 , TraesCS2B02G334000 , TraesCS2A02G315800 , TraesCS4A02G262600 , TraesCS4A02G262600 , TraesCS2D02G313800 , TraesCS4B02G052300 , TraesCS2B02G333700 , TraesCS2B02G333700 , TraesCS3D02G523200 , TraesCS4D02G052500 , TraesCS4D02G052500 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS3A02G022600 , TraesCS2A02G315300 , TraesCS3A02G515300 , TraesCS3A02G515300 , TraesCS4D02G232700 , TraesCS4D02G232700 , TraesCS4A02G369200
Populus -


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cDNA sequences
Sobic.006G096500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G150800 expressed protein -
2 Sobic.005G087400 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
3 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
4 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
5 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.003G006100 Leucine Rich Repeat family protein, expressed -
7 Sobic.005G130600 expressed protein -
8 Sobic.008G057100 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.001G208600 receptor kinase like protein, putative, expressed -
10 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.005G145100 phospholipase A2, putative, expressed -
13 Sobic.004G297950 - -
14 Sobic.002G053900 Cupin domain containing protein, expressed -
15 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
16 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
17 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.001G037400 expressed protein -
19 Sobic.002G064600 expressed protein -
20 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)


Gene co-expression network
sample Sobic006G096500 Sobic006G096500 Sobic004G150800 Sobic004G150800 Sobic006G096500--Sobic004G150800 Sobic005G087400 Sobic005G087400 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic003G269100 Sobic003G269100 Sobic006G096500--Sobic003G269100 Sobic001G140800 Sobic001G140800 Sobic006G096500--Sobic001G140800 Sobic003G006100 Sobic003G006100 Sobic006G096500--Sobic003G006100 Sobic005G130600 Sobic005G130600 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic001G208600 Sobic001G208600 Sobic006G096500--Sobic001G208600 Sobic004G150800--Sobic006G096500 Sobic004G150800--Sobic005G087400 Sobic004G150800--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic004G150800--Sobic001G037400 Sobic005G110600 Sobic005G110600 Sobic004G150800--Sobic005G110600 Sobic004G150800--Sobic001G140800 Sobic004G297950 Sobic004G297950 Sobic004G150800--Sobic004G297950 Sobic004G150800--Sobic005G130600 Sobic003G419600 Sobic003G419600 Sobic004G150800--Sobic003G419600 Sobic005G087400--Sobic001G140800 Sobic005G087400--Sobic004G150800 Sobic005G087400--Sobic006G096500 Sobic001G388000 Sobic001G388000 Sobic005G087400--Sobic001G388000 Sobic001G129600 Sobic001G129600 Sobic005G087400--Sobic001G129600 Sobic003G272900 Sobic003G272900 Sobic005G087400--Sobic003G272900 Sobic005G145100 Sobic005G145100 Sobic005G087400--Sobic005G145100 Sobic005G087400--Sobic005G110600 Sobic005G087400--Sobic003G006100 Sobic006G075000 Sobic006G075000 Sobic010G096100--Sobic006G075000 Sobic010G096100--Sobic001G208600 Sobic009G063400 Sobic009G063400 Sobic010G096100--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic010G096100--Sobic009G026101 Sobic009G125900 Sobic009G125900 Sobic010G096100--Sobic009G125900 Sobic009G017500 Sobic009G017500 Sobic010G096100--Sobic009G017500 Sobic009G251100 Sobic009G251100 Sobic010G096100--Sobic009G251100 Sobic001G484000 Sobic001G484000 Sobic010G096100--Sobic001G484000 Sobic010G114000 Sobic010G114000 Sobic010G096100--Sobic010G114000 Sobic003G321400 Sobic003G321400 Sobic003G269100--Sobic003G321400 Sobic001G099600 Sobic001G099600 Sobic003G269100--Sobic001G099600 Sobic003G269100--Sobic004G297950 Sobic003G115200 Sobic003G115200 Sobic003G269100--Sobic003G115200 Sobic010G047600 Sobic010G047600 Sobic003G269100--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G269100--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic003G269100--Sobic001G046800 Sobic001G140800--Sobic005G110600 Sobic001G140800--Sobic001G388000 Sobic001G140800--Sobic005G145100 Sobic010G133932 Sobic010G133932 Sobic001G140800--Sobic010G133932 Sobic001G140800--Sobic005G087400 Sobic001G140800--Sobic001G129600 Sobic005G130700 Sobic005G130700 Sobic001G140800--Sobic005G130700 Sobic001G140800--Sobic001G484000 Sobic006G062300 Sobic006G062300 Sobic001G140800--Sobic006G062300 Sobic010G119900 Sobic010G119900 Sobic003G006100--Sobic010G119900 Sobic003G006100--Sobic003G419600 Sobic003G006100--Sobic001G140800 Sobic003G006100--Sobic004G150800 Sobic010G124200 Sobic010G124200 Sobic003G006100--Sobic010G124200 Sobic007G090424 Sobic007G090424 Sobic003G006100--Sobic007G090424 Sobic003G006100--Sobic006G096500 Sobic010G228100 Sobic010G228100 Sobic003G006100--Sobic010G228100 Sobic003G006100--Sobic001G037400 Sobic005G130600--Sobic004G297950 Sobic005G130600--Sobic003G321400 Sobic005G130600--Sobic003G269100 Sobic005G130600--Sobic005G110600 Sobic005G130600--Sobic001G140800 Sobic005G130600--Sobic003G115200 Sobic005G130600--Sobic006G096500 Sobic005G130600--Sobic001G046800 Sobic005G130600--Sobic001G099600 Sobic008G057100--Sobic006G096500 Sobic008G057100--Sobic009G017500 Sobic002G357400 Sobic002G357400 Sobic008G057100--Sobic002G357400 Sobic008G057100--Sobic003G269100 Sobic003G049900 Sobic003G049900 Sobic008G057100--Sobic003G049900 Sobic008G057100--Sobic005G145100 Sobic003G443200 Sobic003G443200 Sobic008G057100--Sobic003G443200 Sobic008G057100--Sobic001G208600 Sobic010G276700 Sobic010G276700 Sobic008G057100--Sobic010G276700 Sobic001G208600--Sobic005G145100 Sobic003G099166 Sobic003G099166 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic001G208600--Sobic009G017500 Sobic002G053900 Sobic002G053900 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic003G352700 Sobic003G352700 Sobic001G208600--Sobic003G352700
Octagon: transcription factors


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