Gene annotation
Transcriptome id Sobic.008G057100.2,Sobic.008G057100.1
Synonym Sb08g004800
Functional annotation eukaryotic aspartyl protease domain containing protein, expressed
UniProt A0A1B6PC82 , C5YST3
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF227
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT4G33490 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os12g07780.2,LOC_Os12g07780.1 : eukaryotic aspartyl protease domain containing protein, expressed
MaizeGDB (Corn) Zm00025a054062 , Zm00025a012783
Brachypodium KQJ92016 , KQJ92015
Barley HORVU4Hr1G017390.9 , HORVU4Hr1G017390.6 , HORVU4Hr1G017390.7 , HORVU4Hr1G017390.5 , HORVU4Hr1G017390.1 , HORVU5Hr1G037120.6 , HORVU5Hr1G037120.4 , HORVU5Hr1G037120.5 , HORVU5Hr1G037120.2 , HORVU5Hr1G037120.3 , HORVU5Hr1G037120.1 , HORVU5Hr1G037120.8 , HORVU5Hr1G037120.9 , HORVU4Hr1G017390.14 , HORVU4Hr1G017390.15 , HORVU4Hr1G017390.11 , HORVU4Hr1G017390.12 , HORVU4Hr1G017390.13 , HORVU5Hr1G037120.7 , HORVU5Hr1G037120.10 , HORVU5Hr1G037120.11 , HORVU5Hr1G037120.12
Wheat TraesCS4D02G094200 , TraesCS5D02G128800 , TraesCS5A02G113400 , TraesCS5B02G119900 , TraesCS4A02G219500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
2 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
3 Sobic.002G357400 transcription repressor HOTR, putative, expressed -
4 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
5 Sobic.003G049900 - -
6 Sobic.005G145100 phospholipase A2, putative, expressed -
7 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
8 Sobic.001G208600 receptor kinase like protein, putative, expressed -
9 Sobic.010G276700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sucrose synthase genes(PubMedID : 24456189)@sucrose synthase(PubMedID : 26616172)@Sugar synthesis(PubMedID : 27330561)@sucrose synthase, putative, expressed K00695: sucrose synthase
10 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
11 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
13 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
14 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
15 Sobic.001G222400 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.002G053900 Cupin domain containing protein, expressed -
17 Sobic.010G067500 OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
18 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.001G388000 GTPase-activating protein, putative, expressed -
20 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase


Gene co-expression network
sample Sobic008G057100 Sobic008G057100 Sobic006G096500 Sobic006G096500 Sobic008G057100--Sobic006G096500 Sobic009G017500 Sobic009G017500 Sobic008G057100--Sobic009G017500 Sobic002G357400 Sobic002G357400 Sobic008G057100--Sobic002G357400 Sobic003G269100 Sobic003G269100 Sobic008G057100--Sobic003G269100 Sobic003G049900 Sobic003G049900 Sobic008G057100--Sobic003G049900 Sobic005G145100 Sobic005G145100 Sobic008G057100--Sobic005G145100 Sobic003G443200 Sobic003G443200 Sobic008G057100--Sobic003G443200 Sobic001G208600 Sobic001G208600 Sobic008G057100--Sobic001G208600 Sobic010G276700 Sobic010G276700 Sobic008G057100--Sobic010G276700 Sobic004G150800 Sobic004G150800 Sobic006G096500--Sobic004G150800 Sobic005G087400 Sobic005G087400 Sobic006G096500--Sobic005G087400 Sobic010G096100 Sobic010G096100 Sobic006G096500--Sobic010G096100 Sobic006G096500--Sobic003G269100 Sobic001G140800 Sobic001G140800 Sobic006G096500--Sobic001G140800 Sobic003G006100 Sobic003G006100 Sobic006G096500--Sobic003G006100 Sobic005G130600 Sobic005G130600 Sobic006G096500--Sobic005G130600 Sobic006G096500--Sobic008G057100 Sobic006G096500--Sobic001G208600 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G221900 Sobic009G221900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic002G357400--Sobic009G017500 Sobic003G182400 Sobic003G182400 Sobic002G357400--Sobic003G182400 Sobic002G357400--Sobic008G057100 Sobic005G115600 Sobic005G115600 Sobic002G357400--Sobic005G115600 Sobic001G484000 Sobic001G484000 Sobic002G357400--Sobic001G484000 Sobic003G279800 Sobic003G279800 Sobic002G357400--Sobic003G279800 Sobic003G082700 Sobic003G082700 Sobic002G357400--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic002G357400--Sobic003G352700 Sobic001G365200 Sobic001G365200 Sobic002G357400--Sobic001G365200 Sobic003G321400 Sobic003G321400 Sobic003G269100--Sobic003G321400 Sobic001G099600 Sobic001G099600 Sobic003G269100--Sobic001G099600 Sobic004G297950 Sobic004G297950 Sobic003G269100--Sobic004G297950 Sobic003G115200 Sobic003G115200 Sobic003G269100--Sobic003G115200 Sobic010G047600 Sobic010G047600 Sobic003G269100--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G269100--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic001G046800 Sobic001G046800 Sobic003G269100--Sobic001G046800 Sobic003G206700 Sobic003G206700 Sobic003G049900--Sobic003G206700 Sobic003G049900--Sobic001G208600 Sobic002G053900 Sobic002G053900 Sobic003G049900--Sobic002G053900 Sobic002G347300 Sobic002G347300 Sobic003G049900--Sobic002G347300 Sobic008G178800 Sobic008G178800 Sobic003G049900--Sobic008G178800 Sobic003G049900--Sobic003G269100 Sobic003G049900--Sobic009G017500 Sobic003G049900--Sobic006G096500 Sobic009G215000 Sobic009G215000 Sobic003G049900--Sobic009G215000 Sobic002G028500 Sobic002G028500 Sobic005G145100--Sobic002G028500 Sobic005G145100--Sobic001G208600 Sobic003G239100 Sobic003G239100 Sobic005G145100--Sobic003G239100 Sobic004G290300 Sobic004G290300 Sobic005G145100--Sobic004G290300 Sobic001G129600 Sobic001G129600 Sobic005G145100--Sobic001G129600 Sobic004G266700 Sobic004G266700 Sobic005G145100--Sobic004G266700 Sobic005G145100--Sobic001G140800 Sobic001G388000 Sobic001G388000 Sobic005G145100--Sobic001G388000 Sobic001G144800 Sobic001G144800 Sobic005G145100--Sobic001G144800 Sobic005G122800 Sobic005G122800 Sobic003G443200--Sobic005G122800 Sobic002G050100 Sobic002G050100 Sobic003G443200--Sobic002G050100 Sobic009G253300 Sobic009G253300 Sobic003G443200--Sobic009G253300 Sobic003G443200--Sobic003G239100 Sobic009G033400 Sobic009G033400 Sobic003G443200--Sobic009G033400 Sobic003G443200--Sobic005G145100 Sobic003G443200--Sobic003G082700 Sobic009G008800 Sobic009G008800 Sobic003G443200--Sobic009G008800 Sobic007G091900 Sobic007G091900 Sobic003G443200--Sobic007G091900 Sobic001G208600--Sobic005G145100 Sobic001G208600--Sobic003G099166 Sobic001G208600--Sobic006G075000 Sobic001G208600--Sobic003G239100 Sobic001G208600--Sobic009G017500 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic001G208600--Sobic002G030800 Sobic001G208600--Sobic003G352700 Sobic010G276700--Sobic003G269100 Sobic001G067800 Sobic001G067800 Sobic010G276700--Sobic001G067800 Sobic008G114000 Sobic008G114000 Sobic010G276700--Sobic008G114000 Sobic002G283900 Sobic002G283900 Sobic010G276700--Sobic002G283900 Sobic005G219600 Sobic005G219600 Sobic010G276700--Sobic005G219600 Sobic010G276700--Sobic006G096500 Sobic003G231600 Sobic003G231600 Sobic010G276700--Sobic003G231600 Sobic010G276700--Sobic009G008800 Sobic010G276700--Sobic001G099600
Octagon: transcription factors


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