Gene annotation
Transcriptome id Sobic.003G049900.1
Synonym
Functional annotation -
UniProt A0A1B6Q1E0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G049900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
2 Sobic.001G208600 receptor kinase like protein, putative, expressed -
3 Sobic.002G053900 Cupin domain containing protein, expressed -
4 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
5 Sobic.008G178800 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative, expressed K00549: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
6 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
7 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
8 Sobic.006G096500 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
9 Sobic.009G215000 - -
10 Sobic.001G099600 ankyrin repeat family protein, putative, expressed -
11 Sobic.005G145100 phospholipase A2, putative, expressed -
12 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
13 Sobic.010G067500 OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
14 Sobic.001G334900 X8 domain containing protein, expressed -
15 Sobic.003G321400 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
17 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
18 Sobic.003G099166 - -
19 Sobic.008G057100 eukaryotic aspartyl protease domain containing protein, expressed -
20 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic003G049900 Sobic003G049900 Sobic003G206700 Sobic003G206700 Sobic003G049900--Sobic003G206700 Sobic001G208600 Sobic001G208600 Sobic003G049900--Sobic001G208600 Sobic002G053900 Sobic002G053900 Sobic003G049900--Sobic002G053900 Sobic002G347300 Sobic002G347300 Sobic003G049900--Sobic002G347300 Sobic008G178800 Sobic008G178800 Sobic003G049900--Sobic008G178800 Sobic003G269100 Sobic003G269100 Sobic003G049900--Sobic003G269100 Sobic009G017500 Sobic009G017500 Sobic003G049900--Sobic009G017500 Sobic006G096500 Sobic006G096500 Sobic003G049900--Sobic006G096500 Sobic009G215000 Sobic009G215000 Sobic003G049900--Sobic009G215000 Sobic001G059500 Sobic001G059500 Sobic003G206700--Sobic001G059500 Sobic001G144800 Sobic001G144800 Sobic003G206700--Sobic001G144800 Sobic009G008800 Sobic009G008800 Sobic003G206700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic003G206700--Sobic003G368100 Sobic001G059600 Sobic001G059600 Sobic003G206700--Sobic001G059600 Sobic001G068500 Sobic001G068500 Sobic003G206700--Sobic001G068500 Sobic002G244300 Sobic002G244300 Sobic003G206700--Sobic002G244300 Sobic003G341500 Sobic003G341500 Sobic003G206700--Sobic003G341500 Sobic001G046800 Sobic001G046800 Sobic003G206700--Sobic001G046800 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic003G099166 Sobic003G099166 Sobic001G208600--Sobic003G099166 Sobic006G075000 Sobic006G075000 Sobic001G208600--Sobic006G075000 Sobic003G239100 Sobic003G239100 Sobic001G208600--Sobic003G239100 Sobic001G208600--Sobic009G017500 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic003G352700 Sobic003G352700 Sobic001G208600--Sobic003G352700 Sobic002G053900--Sobic001G046800 Sobic009G072800 Sobic009G072800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic002G053900--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic002G053900--Sobic010G047600 Sobic001G484000 Sobic001G484000 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic002G053900--Sobic009G215000 Sobic002G053900--Sobic003G239100 Sobic001G012400 Sobic001G012400 Sobic002G347300--Sobic001G012400 Sobic001G012600 Sobic001G012600 Sobic002G347300--Sobic001G012600 Sobic009G232200 Sobic009G232200 Sobic002G347300--Sobic009G232200 Sobic002G347300--Sobic001G334900 Sobic002G347300--Sobic001G208600 Sobic009G221900 Sobic009G221900 Sobic002G347300--Sobic009G221900 Sobic002G347300--Sobic003G099166 Sobic002G347300--Sobic002G053900 Sobic002G338400 Sobic002G338400 Sobic002G347300--Sobic002G338400 Sobic006G038200 Sobic006G038200 Sobic008G178800--Sobic006G038200 Sobic009G063400 Sobic009G063400 Sobic008G178800--Sobic009G063400 Sobic010G258500 Sobic010G258500 Sobic008G178800--Sobic010G258500 Sobic008G178800--Sobic002G347300 Sobic009G125900 Sobic009G125900 Sobic008G178800--Sobic009G125900 Sobic004G282700 Sobic004G282700 Sobic008G178800--Sobic004G282700 Sobic008G178800--Sobic009G232200 Sobic008G178800--Sobic009G017500 Sobic010G067500 Sobic010G067500 Sobic008G178800--Sobic010G067500 Sobic003G321400 Sobic003G321400 Sobic003G269100--Sobic003G321400 Sobic001G099600 Sobic001G099600 Sobic003G269100--Sobic001G099600 Sobic004G297950 Sobic004G297950 Sobic003G269100--Sobic004G297950 Sobic003G115200 Sobic003G115200 Sobic003G269100--Sobic003G115200 Sobic003G269100--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic003G269100--Sobic001G261460 Sobic001G264400 Sobic001G264400 Sobic003G269100--Sobic001G264400 Sobic003G269100--Sobic001G484000 Sobic003G269100--Sobic001G046800 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G017500--Sobic009G221900 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic009G017500--Sobic006G075000 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic004G150800 Sobic004G150800 Sobic006G096500--Sobic004G150800 Sobic005G087400 Sobic005G087400 Sobic006G096500--Sobic005G087400 Sobic006G096500--Sobic010G096100 Sobic006G096500--Sobic003G269100 Sobic001G140800 Sobic001G140800 Sobic006G096500--Sobic001G140800 Sobic003G006100 Sobic003G006100 Sobic006G096500--Sobic003G006100 Sobic005G130600 Sobic005G130600 Sobic006G096500--Sobic005G130600 Sobic008G057100 Sobic008G057100 Sobic006G096500--Sobic008G057100 Sobic006G096500--Sobic001G208600 Sobic009G215000--Sobic002G053900 Sobic009G215000--Sobic001G046800 Sobic009G215000--Sobic009G008800 Sobic009G215000--Sobic010G106700 Sobic009G215000--Sobic001G484000 Sobic009G215000--Sobic009G072800 Sobic005G052500 Sobic005G052500 Sobic009G215000--Sobic005G052500 Sobic009G215000--Sobic001G208600 Sobic009G215000--Sobic003G206700
Octagon: transcription factors


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