Gene annotation
Transcriptome id Sobic.002G357400.1
Synonym Sb02g037860, ATET2, ET2
Functional annotation transcription repressor HOTR, putative, expressed
UniProt C5XD27
Pfam -
Panther DB PTHR35133 PTHR35133:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56780 : effector of transcription2
RAP-DB (Rice) LOC_Os07g39800.1 : transcription repressor HOTR, putative, expressed
MaizeGDB (Corn) Zm00025a048557
Brachypodium -
Barley HORVU2Hr1G035630.3 , HORVU2Hr1G035630.2 , HORVU2Hr1G035630.1
Wheat TraesCS2D02G195100 , TraesCS2A02G192400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
2 Sobic.003G182400 DNA-damage-repair/toleration protein DRT102, putative, expressed -
3 Sobic.008G057100 eukaryotic aspartyl protease domain containing protein, expressed -
4 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
5 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.003G279800 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
7 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
8 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
10 Sobic.005G145100 phospholipase A2, putative, expressed -
11 Sobic.002G030800 app1, putative, expressed -
12 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
13 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
14 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
15 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
16 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
17 Sobic.002G053900 Cupin domain containing protein, expressed -
18 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
19 Sobic.001G208600 receptor kinase like protein, putative, expressed -
20 Sobic.006G038200 receptor protein kinase, putative, expressed -


Gene co-expression network
sample Sobic002G357400 Sobic002G357400 Sobic009G017500 Sobic009G017500 Sobic002G357400--Sobic009G017500 Sobic003G182400 Sobic003G182400 Sobic002G357400--Sobic003G182400 Sobic008G057100 Sobic008G057100 Sobic002G357400--Sobic008G057100 Sobic005G115600 Sobic005G115600 Sobic002G357400--Sobic005G115600 Sobic001G484000 Sobic001G484000 Sobic002G357400--Sobic001G484000 Sobic003G279800 Sobic003G279800 Sobic002G357400--Sobic003G279800 Sobic003G082700 Sobic003G082700 Sobic002G357400--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic002G357400--Sobic003G352700 Sobic001G365200 Sobic001G365200 Sobic002G357400--Sobic001G365200 Sobic001G208600 Sobic001G208600 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G221900 Sobic009G221900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic008G103900 Sobic008G103900 Sobic003G182400--Sobic008G103900 Sobic007G188600 Sobic007G188600 Sobic003G182400--Sobic007G188600 Sobic001G202400 Sobic001G202400 Sobic003G182400--Sobic001G202400 Sobic006G038200 Sobic006G038200 Sobic003G182400--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic003G182400--Sobic010G212200 Sobic003G182400--Sobic002G357400 Sobic006G281500 Sobic006G281500 Sobic003G182400--Sobic006G281500 Sobic007G143000 Sobic007G143000 Sobic003G182400--Sobic007G143000 Sobic004G140300 Sobic004G140300 Sobic003G182400--Sobic004G140300 Sobic006G096500 Sobic006G096500 Sobic008G057100--Sobic006G096500 Sobic008G057100--Sobic009G017500 Sobic008G057100--Sobic002G357400 Sobic003G269100 Sobic003G269100 Sobic008G057100--Sobic003G269100 Sobic003G049900 Sobic003G049900 Sobic008G057100--Sobic003G049900 Sobic005G145100 Sobic005G145100 Sobic008G057100--Sobic005G145100 Sobic003G443200 Sobic003G443200 Sobic008G057100--Sobic003G443200 Sobic008G057100--Sobic001G208600 Sobic010G276700 Sobic010G276700 Sobic008G057100--Sobic010G276700 Sobic006G030800 Sobic006G030800 Sobic005G115600--Sobic006G030800 Sobic005G115600--Sobic009G017500 Sobic005G115600--Sobic003G279800 Sobic002G383900 Sobic002G383900 Sobic005G115600--Sobic002G383900 Sobic003G157700 Sobic003G157700 Sobic005G115600--Sobic003G157700 Sobic002G083600 Sobic002G083600 Sobic005G115600--Sobic002G083600 Sobic006G256200 Sobic006G256200 Sobic005G115600--Sobic006G256200 Sobic003G258800 Sobic003G258800 Sobic005G115600--Sobic003G258800 Sobic003G105000 Sobic003G105000 Sobic005G115600--Sobic003G105000 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G046800 Sobic001G046800 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic002G053900 Sobic002G053900 Sobic001G484000--Sobic002G053900 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic009G008800 Sobic009G008800 Sobic001G484000--Sobic009G008800 Sobic003G239100 Sobic003G239100 Sobic001G484000--Sobic003G239100 Sobic001G228200 Sobic001G228200 Sobic003G279800--Sobic001G228200 Sobic003G279800--Sobic005G115600 Sobic004G215700 Sobic004G215700 Sobic003G279800--Sobic004G215700 Sobic006G135000 Sobic006G135000 Sobic003G279800--Sobic006G135000 Sobic008G129300 Sobic008G129300 Sobic003G279800--Sobic008G129300 Sobic003G279800--Sobic009G017500 Sobic003G279800--Sobic007G143000 Sobic003G445000 Sobic003G445000 Sobic003G279800--Sobic003G445000 Sobic003G279800--Sobic002G383900 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic003G352700--Sobic003G082700 Sobic003G352700--Sobic004G047600 Sobic003G352700--Sobic009G008800 Sobic003G352700--Sobic003G239100 Sobic003G352700--Sobic001G068500 Sobic003G352700--Sobic001G484000 Sobic001G059500 Sobic001G059500 Sobic003G352700--Sobic001G059500 Sobic005G127200 Sobic005G127200 Sobic003G352700--Sobic005G127200 Sobic007G047300 Sobic007G047300 Sobic003G352700--Sobic007G047300 Sobic004G161900 Sobic004G161900 Sobic001G365200--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic001G365200--Sobic003G368000 Sobic001G365200--Sobic002G383900 Sobic001G365200--Sobic003G105000 Sobic005G022500 Sobic005G022500 Sobic001G365200--Sobic005G022500 Sobic010G045400 Sobic010G045400 Sobic001G365200--Sobic010G045400 Sobic007G119500 Sobic007G119500 Sobic001G365200--Sobic007G119500 Sobic006G000600 Sobic006G000600 Sobic001G365200--Sobic006G000600 Sobic008G037900 Sobic008G037900 Sobic001G365200--Sobic008G037900
Octagon: transcription factors


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