Gene annotation
Transcriptome id Sobic.003G279800.1
Synonym Sb03g033140
Functional annotation plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed
UniProt C5XID4
Pfam PF04774 PF09598
Panther DB PTHR12299:SF27 PTHR12299
NCBI CDD -
KEGG Orthology K13199; plasminogen activator inhibitor 1 RNA-binding protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17520 : Hyaluronan / mRNA binding family
RAP-DB (Rice) LOC_Os01g52390.1 : plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a027769 , Zm00025a036768 , Zm00025a027773
Brachypodium KQK05232 , KQK09524
Barley HORVU1Hr1G080980.2 , HORVU1Hr1G080980.3 , HORVU1Hr1G080980.1 , HORVU1Hr1G080980.4 , HORVU3Hr1G068500.4 , HORVU3Hr1G068500.2 , HORVU3Hr1G068500.3 , HORVU3Hr1G068500.1
Wheat TraesCS1A02G354700 , TraesCS1D02G355800 , TraesCS1B02G367100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
2 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
3 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
4 Sobic.006G135000 RNA binding protein, putative, expressed K11090: LA, lupus La protein
5 Sobic.008G129300 CPuORF5 - conserved peptide uORF-containing transcript, expressed -
6 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
7 Sobic.007G143000 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
8 Sobic.003G445000 pectinacetylesterase domain containing protein, expressed -
9 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
10 Sobic.001G493400 nucleic acid binding protein, putative, expressed -
11 Sobic.003G105000 kinase, pfkB family, putative, expressed -
12 Sobic.004G038200 - -
13 Sobic.004G326600 T-complex protein, putative, expressed K09493: CCT1, T-complex protein 1 subunit alpha
14 Sobic.010G067500 OsSCP32 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
16 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
17 Sobic.001G230100 3-ketoacyl-CoA thiolase, peroxisomal precursor, putative, expressed K07513: acetyl-CoA acyltransferase 1
18 Sobic.002G357400 transcription repressor HOTR, putative, expressed -
19 Sobic.005G194900 phosphoserine phosphatase, chloroplast precursor, putative, expressed K01079: serB, phosphoserine phosphatase
20 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e


Gene co-expression network
sample Sobic003G279800 Sobic003G279800 Sobic001G228200 Sobic001G228200 Sobic003G279800--Sobic001G228200 Sobic005G115600 Sobic005G115600 Sobic003G279800--Sobic005G115600 Sobic004G215700 Sobic004G215700 Sobic003G279800--Sobic004G215700 Sobic006G135000 Sobic006G135000 Sobic003G279800--Sobic006G135000 Sobic008G129300 Sobic008G129300 Sobic003G279800--Sobic008G129300 Sobic009G017500 Sobic009G017500 Sobic003G279800--Sobic009G017500 Sobic007G143000 Sobic007G143000 Sobic003G279800--Sobic007G143000 Sobic003G445000 Sobic003G445000 Sobic003G279800--Sobic003G445000 Sobic002G383900 Sobic002G383900 Sobic003G279800--Sobic002G383900 Sobic008G168100 Sobic008G168100 Sobic001G228200--Sobic008G168100 Sobic009G059500 Sobic009G059500 Sobic001G228200--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic001G228200--Sobic002G186900 Sobic001G371100 Sobic001G371100 Sobic001G228200--Sobic001G371100 Sobic003G146800 Sobic003G146800 Sobic001G228200--Sobic003G146800 Sobic001G397000 Sobic001G397000 Sobic001G228200--Sobic001G397000 Sobic007G113300 Sobic007G113300 Sobic001G228200--Sobic007G113300 Sobic002G280700 Sobic002G280700 Sobic001G228200--Sobic002G280700 Sobic004G326600 Sobic004G326600 Sobic001G228200--Sobic004G326600 Sobic006G030800 Sobic006G030800 Sobic005G115600--Sobic006G030800 Sobic005G115600--Sobic009G017500 Sobic005G115600--Sobic003G279800 Sobic005G115600--Sobic002G383900 Sobic003G157700 Sobic003G157700 Sobic005G115600--Sobic003G157700 Sobic002G083600 Sobic002G083600 Sobic005G115600--Sobic002G083600 Sobic006G256200 Sobic006G256200 Sobic005G115600--Sobic006G256200 Sobic003G258800 Sobic003G258800 Sobic005G115600--Sobic003G258800 Sobic003G105000 Sobic003G105000 Sobic005G115600--Sobic003G105000 Sobic002G423500 Sobic002G423500 Sobic004G215700--Sobic002G423500 Sobic004G215700--Sobic004G326600 Sobic005G163700 Sobic005G163700 Sobic004G215700--Sobic005G163700 Sobic006G024700 Sobic006G024700 Sobic004G215700--Sobic006G024700 Sobic004G047200 Sobic004G047200 Sobic004G215700--Sobic004G047200 Sobic001G460500 Sobic001G460500 Sobic004G215700--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic004G215700--Sobic003G008600 Sobic003G388900 Sobic003G388900 Sobic004G215700--Sobic003G388900 Sobic004G212100 Sobic004G212100 Sobic004G215700--Sobic004G212100 Sobic006G135000--Sobic001G371100 Sobic006G135000--Sobic001G228200 Sobic006G135000--Sobic004G215700 Sobic006G135000--Sobic003G279800 Sobic006G135000--Sobic003G445000 Sobic004G252000 Sobic004G252000 Sobic006G135000--Sobic004G252000 Sobic006G135000--Sobic004G326600 Sobic002G319200 Sobic002G319200 Sobic006G135000--Sobic002G319200 Sobic006G135000--Sobic004G047200 Sobic001G281900 Sobic001G281900 Sobic008G129300--Sobic001G281900 Sobic003G330500 Sobic003G330500 Sobic008G129300--Sobic003G330500 Sobic001G196100 Sobic001G196100 Sobic008G129300--Sobic001G196100 Sobic001G096100 Sobic001G096100 Sobic008G129300--Sobic001G096100 Sobic009G238900 Sobic009G238900 Sobic008G129300--Sobic009G238900 Sobic002G392800 Sobic002G392800 Sobic008G129300--Sobic002G392800 Sobic002G045100 Sobic002G045100 Sobic008G129300--Sobic002G045100 Sobic005G105500 Sobic005G105500 Sobic008G129300--Sobic005G105500 Sobic006G002700 Sobic006G002700 Sobic008G129300--Sobic006G002700 Sobic001G208600 Sobic001G208600 Sobic009G017500--Sobic001G208600 Sobic001G263900 Sobic001G263900 Sobic009G017500--Sobic001G263900 Sobic009G221900 Sobic009G221900 Sobic009G017500--Sobic009G221900 Sobic002G030800 Sobic002G030800 Sobic009G017500--Sobic002G030800 Sobic008G072600 Sobic008G072600 Sobic009G017500--Sobic008G072600 Sobic010G096100 Sobic010G096100 Sobic009G017500--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic009G017500--Sobic006G075000 Sobic003G099166 Sobic003G099166 Sobic009G017500--Sobic003G099166 Sobic003G238600 Sobic003G238600 Sobic009G017500--Sobic003G238600 Sobic007G143000--Sobic002G045100 Sobic001G214900 Sobic001G214900 Sobic007G143000--Sobic001G214900 Sobic003G160900 Sobic003G160900 Sobic007G143000--Sobic003G160900 Sobic004G248900 Sobic004G248900 Sobic007G143000--Sobic004G248900 Sobic006G243400 Sobic006G243400 Sobic007G143000--Sobic006G243400 Sobic010G018000 Sobic010G018000 Sobic007G143000--Sobic010G018000 Sobic007G034400 Sobic007G034400 Sobic007G143000--Sobic007G034400 Sobic003G326900 Sobic003G326900 Sobic007G143000--Sobic003G326900 Sobic005G164700 Sobic005G164700 Sobic007G143000--Sobic005G164700 Sobic002G238300 Sobic002G238300 Sobic003G445000--Sobic002G238300 Sobic001G242800 Sobic001G242800 Sobic003G445000--Sobic001G242800 Sobic010G178600 Sobic010G178600 Sobic003G445000--Sobic010G178600 Sobic003G445000--Sobic006G135000 Sobic009G081500 Sobic009G081500 Sobic003G445000--Sobic009G081500 Sobic009G105900 Sobic009G105900 Sobic003G445000--Sobic009G105900 Sobic002G009300 Sobic002G009300 Sobic003G445000--Sobic002G009300 Sobic003G445000--Sobic003G279800 Sobic007G092600 Sobic007G092600 Sobic003G445000--Sobic007G092600 Sobic004G161900 Sobic004G161900 Sobic002G383900--Sobic004G161900 Sobic002G383900--Sobic001G263900 Sobic007G020700 Sobic007G020700 Sobic002G383900--Sobic007G020700 Sobic005G022500 Sobic005G022500 Sobic002G383900--Sobic005G022500 Sobic005G219700 Sobic005G219700 Sobic002G383900--Sobic005G219700 Sobic007G106500 Sobic007G106500 Sobic002G383900--Sobic007G106500 Sobic001G365200 Sobic001G365200 Sobic002G383900--Sobic001G365200 Sobic002G207000 Sobic002G207000 Sobic002G383900--Sobic002G207000 Sobic001G314000 Sobic001G314000 Sobic002G383900--Sobic001G314000
Octagon: transcription factors


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