Gene annotation
Transcriptome id Sobic.003G182400.1
Synonym Sb03g024040, DRT102
Functional annotation DNA-damage-repair/toleration protein DRT102, putative, expressed
UniProt C5XMW3
Pfam PF02502
Panther DB PTHR30345 PTHR30345:SF0
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT3G04880 : DNA-damage-repair/toleration protein (DRT102)
RAP-DB (Rice) LOC_Os01g36090.1 : DNA-damage-repair/toleration protein DRT102, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08229 , PNT72168 , PNT72169 , KQK08230 , KQK08231 , PNT72167
Barley -
Wheat TraesCS1D02G360700
Populus -


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cDNA sequences
Sobic.003G182400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G103900 glycine-rich RNA-binding protein 7, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
2 Sobic.007G188600 tRNA synthetase class II core domain containing protein, expressed K01880: GARS, glycyl-tRNA synthetase
3 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
4 Sobic.006G038200 receptor protein kinase, putative, expressed -
5 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
6 Sobic.002G357400 transcription repressor HOTR, putative, expressed -
7 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
8 Sobic.007G143000 ribosomal protein S17, putative, expressed K02961: RP-S17, MRPS17, small subunit ribosomal protein S17
9 Sobic.004G140300 delta14-sterol reductase, putative, expressed K00213: 7-dehydrocholesterol reductase
10 Sobic.006G179700 Ser/Thr-rich protein T10 in DGCR region, putative, expressed -
11 Sobic.010G161525 - -
12 Sobic.008G103800 expressed protein -
13 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
14 Sobic.007G034400 RNA recognition motif containing protein, putative, expressed -
15 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
16 Sobic.006G177300 ATFUC1, putative, expressed K01206: alpha-L-fucosidase
17 Sobic.009G017500 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
18 Sobic.003G015400 ribosomal protein S6 family protein, putative, expressed K02990: RP-S6, MRPS6, small subunit ribosomal protein S6
19 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.001G240500 flavoprotein wrbA, putative, expressed K03809: NAD(P)H dehydrogenase (quinone)


Gene co-expression network
sample Sobic003G182400 Sobic003G182400 Sobic008G103900 Sobic008G103900 Sobic003G182400--Sobic008G103900 Sobic007G188600 Sobic007G188600 Sobic003G182400--Sobic007G188600 Sobic001G202400 Sobic001G202400 Sobic003G182400--Sobic001G202400 Sobic006G038200 Sobic006G038200 Sobic003G182400--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic003G182400--Sobic010G212200 Sobic002G357400 Sobic002G357400 Sobic003G182400--Sobic002G357400 Sobic006G281500 Sobic006G281500 Sobic003G182400--Sobic006G281500 Sobic007G143000 Sobic007G143000 Sobic003G182400--Sobic007G143000 Sobic004G140300 Sobic004G140300 Sobic003G182400--Sobic004G140300 Sobic007G034400 Sobic007G034400 Sobic008G103900--Sobic007G034400 Sobic010G013900 Sobic010G013900 Sobic008G103900--Sobic010G013900 Sobic008G103900--Sobic001G202400 Sobic004G248900 Sobic004G248900 Sobic008G103900--Sobic004G248900 Sobic009G130400 Sobic009G130400 Sobic008G103900--Sobic009G130400 Sobic002G179000 Sobic002G179000 Sobic008G103900--Sobic002G179000 Sobic010G018000 Sobic010G018000 Sobic008G103900--Sobic010G018000 Sobic003G015400 Sobic003G015400 Sobic008G103900--Sobic003G015400 Sobic008G103900--Sobic007G143000 Sobic006G198600 Sobic006G198600 Sobic007G188600--Sobic006G198600 Sobic007G188600--Sobic006G281500 Sobic002G402500 Sobic002G402500 Sobic007G188600--Sobic002G402500 Sobic002G423500 Sobic002G423500 Sobic007G188600--Sobic002G423500 Sobic010G161525 Sobic010G161525 Sobic007G188600--Sobic010G161525 Sobic006G251600 Sobic006G251600 Sobic007G188600--Sobic006G251600 Sobic006G157000 Sobic006G157000 Sobic007G188600--Sobic006G157000 Sobic009G081500 Sobic009G081500 Sobic007G188600--Sobic009G081500 Sobic008G083400 Sobic008G083400 Sobic007G188600--Sobic008G083400 Sobic001G202400--Sobic003G015400 Sobic001G202400--Sobic007G034400 Sobic001G202400--Sobic008G103900 Sobic001G543300 Sobic001G543300 Sobic001G202400--Sobic001G543300 Sobic001G081400 Sobic001G081400 Sobic001G202400--Sobic001G081400 Sobic009G207100 Sobic009G207100 Sobic001G202400--Sobic009G207100 Sobic002G007100 Sobic002G007100 Sobic001G202400--Sobic002G007100 Sobic001G202400--Sobic003G182400 Sobic009G168000 Sobic009G168000 Sobic001G202400--Sobic009G168000 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic002G338400 Sobic002G338400 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G075000 Sobic006G075000 Sobic006G038200--Sobic006G075000 Sobic001G060300 Sobic001G060300 Sobic010G212200--Sobic001G060300 Sobic004G262300 Sobic004G262300 Sobic010G212200--Sobic004G262300 Sobic001G392800 Sobic001G392800 Sobic010G212200--Sobic001G392800 Sobic001G145500 Sobic001G145500 Sobic010G212200--Sobic001G145500 Sobic001G451901 Sobic001G451901 Sobic010G212200--Sobic001G451901 Sobic003G330500 Sobic003G330500 Sobic010G212200--Sobic003G330500 Sobic004G164000 Sobic004G164000 Sobic010G212200--Sobic004G164000 Sobic010G212200--Sobic002G402500 Sobic001G240500 Sobic001G240500 Sobic010G212200--Sobic001G240500 Sobic002G357400--Sobic009G017500 Sobic002G357400--Sobic003G182400 Sobic008G057100 Sobic008G057100 Sobic002G357400--Sobic008G057100 Sobic005G115600 Sobic005G115600 Sobic002G357400--Sobic005G115600 Sobic001G484000 Sobic001G484000 Sobic002G357400--Sobic001G484000 Sobic003G279800 Sobic003G279800 Sobic002G357400--Sobic003G279800 Sobic003G082700 Sobic003G082700 Sobic002G357400--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic002G357400--Sobic003G352700 Sobic001G365200 Sobic001G365200 Sobic002G357400--Sobic001G365200 Sobic001G263000 Sobic001G263000 Sobic006G281500--Sobic001G263000 Sobic009G227900 Sobic009G227900 Sobic006G281500--Sobic009G227900 Sobic006G281500--Sobic009G081500 Sobic002G317300 Sobic002G317300 Sobic006G281500--Sobic002G317300 Sobic005G105500 Sobic005G105500 Sobic006G281500--Sobic005G105500 Sobic002G259400 Sobic002G259400 Sobic006G281500--Sobic002G259400 Sobic006G281500--Sobic007G188600 Sobic003G119400 Sobic003G119400 Sobic006G281500--Sobic003G119400 Sobic010G085200 Sobic010G085200 Sobic006G281500--Sobic010G085200 Sobic002G045100 Sobic002G045100 Sobic007G143000--Sobic002G045100 Sobic001G214900 Sobic001G214900 Sobic007G143000--Sobic001G214900 Sobic003G160900 Sobic003G160900 Sobic007G143000--Sobic003G160900 Sobic007G143000--Sobic004G248900 Sobic006G243400 Sobic006G243400 Sobic007G143000--Sobic006G243400 Sobic007G143000--Sobic010G018000 Sobic007G143000--Sobic007G034400 Sobic003G326900 Sobic003G326900 Sobic007G143000--Sobic003G326900 Sobic005G164700 Sobic005G164700 Sobic007G143000--Sobic005G164700 Sobic009G151800 Sobic009G151800 Sobic004G140300--Sobic009G151800 Sobic009G151400 Sobic009G151400 Sobic004G140300--Sobic009G151400 Sobic002G317600 Sobic002G317600 Sobic004G140300--Sobic002G317600 Sobic002G264300 Sobic002G264300 Sobic004G140300--Sobic002G264300 Sobic004G184000 Sobic004G184000 Sobic004G140300--Sobic004G184000 Sobic004G140300--Sobic003G182400 Sobic004G140300--Sobic008G083400 Sobic003G420900 Sobic003G420900 Sobic004G140300--Sobic003G420900 Sobic002G428900 Sobic002G428900 Sobic004G140300--Sobic002G428900
Octagon: transcription factors


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