Gene annotation
Transcriptome id Sobic.004G140300.1
Synonym DWF5, ST7R, PA, Sb04g017400, 7RED, LE
Functional annotation delta14-sterol reductase, putative, expressed
UniProt C5Y133
Pfam PF01222
Panther DB PTHR21257 PTHR21257:SF34
NCBI CDD KOG1435; Sterol reductase/lamin B receptor
KEGG Orthology K00213; 7-dehydrocholesterol reductase
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G50430 : Ergosterol biosynthesis ERG4/ERG24 family
RAP-DB (Rice) LOC_Os02g26650.3 : delta14-sterol reductase, putative, expressed
MaizeGDB (Corn) Zm00025a020295
Brachypodium KQJ99405 , KQJ99328
Barley HORVU3Hr1G107040.11 , HORVU3Hr1G107040.15 , HORVU3Hr1G107040.3 , HORVU3Hr1G107040.2 , HORVU3Hr1G107040.1 , HORVU3Hr1G107040.7 , HORVU3Hr1G107040.6 , HORVU3Hr1G107040.5 , HORVU3Hr1G107040.4 , HORVU3Hr1G107040.9 , HORVU3Hr1G107040.8 , HORVU3Hr1G107040.13 , HORVU3Hr1G107040.12 , HORVU3Hr1G107040.10 , HORVU3Hr1G107040.16 , HORVU3Hr1G107040.14
Wheat TraesCS3D02G484700 , TraesCS3A02G488600 , TraesCS3B02G536500
Populus PNT18658 , PNT18657


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cDNA sequences
Sobic.004G140300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G151800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
2 Sobic.009G151400 "Capable of trans-activating SbMATE promoter alleles harboring one, four, and five copies of the MITE repeats "(PubMedID : 30545913)@zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
3 Sobic.002G317600 endoribonuclease, putative, expressed -
4 Sobic.002G264300 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating, putative, expressed K07748: NSDHL, sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)
5 Sobic.004G184000 SFT2, putative, expressed -
6 Sobic.003G182400 DNA-damage-repair/toleration protein DRT102, putative, expressed -
7 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
8 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
9 Sobic.002G428900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MRH1, putative, expressed -
10 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
11 Sobic.009G065200 zinc finger family protein, putative, expressed -
12 Sobic.006G157000 adenylosuccinate lyase, putative, expressed K01756: purB, adenylosuccinate lyase
13 Sobic.005G129201 - -
14 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
15 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
16 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
17 Sobic.001G518600 fatty acid hydroxylase, putative, expressed K14424: plant 4alpha-monomethylsterol monooxygenase
18 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
19 Sobic.010G055400 OsWAK63 - OsWAK receptor-like protein kinase, expressed -
20 Sobic.008G103800 expressed protein -


Gene co-expression network
sample Sobic004G140300 Sobic004G140300 Sobic009G151800 Sobic009G151800 Sobic004G140300--Sobic009G151800 Sobic009G151400 Sobic009G151400 Sobic004G140300--Sobic009G151400 Sobic002G317600 Sobic002G317600 Sobic004G140300--Sobic002G317600 Sobic002G264300 Sobic002G264300 Sobic004G140300--Sobic002G264300 Sobic004G184000 Sobic004G184000 Sobic004G140300--Sobic004G184000 Sobic003G182400 Sobic003G182400 Sobic004G140300--Sobic003G182400 Sobic008G083400 Sobic008G083400 Sobic004G140300--Sobic008G083400 Sobic003G420900 Sobic003G420900 Sobic004G140300--Sobic003G420900 Sobic002G428900 Sobic002G428900 Sobic004G140300--Sobic002G428900 Sobic009G081500 Sobic009G081500 Sobic009G151800--Sobic009G081500 Sobic001G460500 Sobic001G460500 Sobic009G151800--Sobic001G460500 Sobic009G151800--Sobic002G264300 Sobic003G259600 Sobic003G259600 Sobic009G151800--Sobic003G259600 Sobic004G075200 Sobic004G075200 Sobic009G151800--Sobic004G075200 Sobic002G356600 Sobic002G356600 Sobic009G151800--Sobic002G356600 Sobic004G356200 Sobic004G356200 Sobic009G151800--Sobic004G356200 Sobic005G031000 Sobic005G031000 Sobic009G151800--Sobic005G031000 Sobic006G157000 Sobic006G157000 Sobic009G151800--Sobic006G157000 Sobic009G151400--Sobic004G140300 Sobic007G219200 Sobic007G219200 Sobic009G151400--Sobic007G219200 Sobic003G165800 Sobic003G165800 Sobic009G151400--Sobic003G165800 Sobic004G006700 Sobic004G006700 Sobic009G151400--Sobic004G006700 Sobic009G151400--Sobic002G428900 Sobic010G224900 Sobic010G224900 Sobic009G151400--Sobic010G224900 Sobic003G400600 Sobic003G400600 Sobic009G151400--Sobic003G400600 Sobic010G123300 Sobic010G123300 Sobic009G151400--Sobic010G123300 Sobic001G389500 Sobic001G389500 Sobic009G151400--Sobic001G389500 Sobic001G436300 Sobic001G436300 Sobic002G317600--Sobic001G436300 Sobic008G075200 Sobic008G075200 Sobic002G317600--Sobic008G075200 Sobic008G059900 Sobic008G059900 Sobic002G317600--Sobic008G059900 Sobic007G079600 Sobic007G079600 Sobic002G317600--Sobic007G079600 Sobic007G172600 Sobic007G172600 Sobic002G317600--Sobic007G172600 Sobic003G248300 Sobic003G248300 Sobic002G317600--Sobic003G248300 Sobic001G235700 Sobic001G235700 Sobic002G317600--Sobic001G235700 Sobic008G181400 Sobic008G181400 Sobic002G317600--Sobic008G181400 Sobic001G176900 Sobic001G176900 Sobic002G317600--Sobic001G176900 Sobic001G115500 Sobic001G115500 Sobic002G264300--Sobic001G115500 Sobic010G073500 Sobic010G073500 Sobic002G264300--Sobic010G073500 Sobic002G126800 Sobic002G126800 Sobic002G264300--Sobic002G126800 Sobic002G264300--Sobic009G151800 Sobic001G373000 Sobic001G373000 Sobic002G264300--Sobic001G373000 Sobic001G008500 Sobic001G008500 Sobic002G264300--Sobic001G008500 Sobic004G030400 Sobic004G030400 Sobic002G264300--Sobic004G030400 Sobic006G071628 Sobic006G071628 Sobic002G264300--Sobic006G071628 Sobic002G264300--Sobic004G075200 Sobic007G165300 Sobic007G165300 Sobic004G184000--Sobic007G165300 Sobic005G129201 Sobic005G129201 Sobic004G184000--Sobic005G129201 Sobic003G326900 Sobic003G326900 Sobic004G184000--Sobic003G326900 Sobic010G258000 Sobic010G258000 Sobic004G184000--Sobic010G258000 Sobic001G451901 Sobic001G451901 Sobic004G184000--Sobic001G451901 Sobic003G348200 Sobic003G348200 Sobic004G184000--Sobic003G348200 Sobic007G217400 Sobic007G217400 Sobic004G184000--Sobic007G217400 Sobic001G110300 Sobic001G110300 Sobic004G184000--Sobic001G110300 Sobic001G116000 Sobic001G116000 Sobic004G184000--Sobic001G116000 Sobic008G103900 Sobic008G103900 Sobic003G182400--Sobic008G103900 Sobic007G188600 Sobic007G188600 Sobic003G182400--Sobic007G188600 Sobic001G202400 Sobic001G202400 Sobic003G182400--Sobic001G202400 Sobic006G038200 Sobic006G038200 Sobic003G182400--Sobic006G038200 Sobic010G212200 Sobic010G212200 Sobic003G182400--Sobic010G212200 Sobic002G357400 Sobic002G357400 Sobic003G182400--Sobic002G357400 Sobic006G281500 Sobic006G281500 Sobic003G182400--Sobic006G281500 Sobic007G143000 Sobic007G143000 Sobic003G182400--Sobic007G143000 Sobic003G182400--Sobic004G140300 Sobic006G251600 Sobic006G251600 Sobic008G083400--Sobic006G251600 Sobic001G432300 Sobic001G432300 Sobic008G083400--Sobic001G432300 Sobic001G371100 Sobic001G371100 Sobic008G083400--Sobic001G371100 Sobic004G249300 Sobic004G249300 Sobic008G083400--Sobic004G249300 Sobic008G083400--Sobic009G081500 Sobic002G110400 Sobic002G110400 Sobic008G083400--Sobic002G110400 Sobic007G171200 Sobic007G171200 Sobic008G083400--Sobic007G171200 Sobic008G083400--Sobic001G008500 Sobic003G407800 Sobic003G407800 Sobic008G083400--Sobic003G407800 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic004G275600 Sobic004G275600 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic002G388600 Sobic002G388600 Sobic002G428900--Sobic002G388600 Sobic003G122100 Sobic003G122100 Sobic002G428900--Sobic003G122100 Sobic005G022000 Sobic005G022000 Sobic002G428900--Sobic005G022000 Sobic002G428900--Sobic004G140300 Sobic010G059200 Sobic010G059200 Sobic002G428900--Sobic010G059200 Sobic002G428900--Sobic009G151400 Sobic001G408800 Sobic001G408800 Sobic002G428900--Sobic001G408800 Sobic002G428900--Sobic004G296800 Sobic002G428900--Sobic003G165800
Octagon: transcription factors


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