Gene annotation
Transcriptome id Sobic.010G059200.1
Synonym Sb10g005100, CBL
Functional annotation cystathionine gamma-synthase, putative, expressed
UniProt A0A194YHJ3
Pfam PF01053
Panther DB PTHR11808 PTHR11808:SF50
NCBI CDD KOG0053; Cystathionine beta-lyases/cystathionine gamma-synthases
KEGG Orthology K01760; cysteine-S-conjugate beta-lyase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G57050 : cystathionine beta-lyase
RAP-DB (Rice) LOC_Os06g07860.1 : cystathionine gamma-synthase, putative, expressed
MaizeGDB (Corn) Zm00025a049835
Brachypodium KQK19362
Barley HORVU7Hr1G028540.2 , HORVU7Hr1G028540.1
Wheat TraesCS7B02G040800 , TraesCS7D02G140400 , TraesCS7A02G138600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
2 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
3 Sobic.004G124100 EMB1303, putative, expressed -
4 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
5 Sobic.010G123300 expressed protein -
6 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
7 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
8 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
9 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.005G031000 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed K00225: L-galactono-1,4-lactone dehydrogenase
11 Sobic.004G032100 expressed protein -
12 Sobic.002G321400 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
13 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
14 Sobic.001G466900 expressed protein -
15 Sobic.002G428900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MRH1, putative, expressed -
16 Sobic.004G314500 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed -
17 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
18 Sobic.007G203000 RNA pseudouridine synthase, putative, expressed -
19 Sobic.009G201900 peptidyl-tRNA hydrolase, putative, expressed K04794: peptidyl-tRNA hydrolase, PTH2 family
20 Sobic.001G486700 adenylosuccinate synthetase, chloroplast precursor, putative, expressed K01939: purA, adenylosuccinate synthase


Gene co-expression network
sample Sobic010G059200 Sobic010G059200 Sobic009G124000 Sobic009G124000 Sobic010G059200--Sobic009G124000 Sobic003G165800 Sobic003G165800 Sobic010G059200--Sobic003G165800 Sobic004G124100 Sobic004G124100 Sobic010G059200--Sobic004G124100 Sobic003G420900 Sobic003G420900 Sobic010G059200--Sobic003G420900 Sobic010G123300 Sobic010G123300 Sobic010G059200--Sobic010G123300 Sobic002G301200 Sobic002G301200 Sobic010G059200--Sobic002G301200 Sobic004G296800 Sobic004G296800 Sobic010G059200--Sobic004G296800 Sobic001G376700 Sobic001G376700 Sobic010G059200--Sobic001G376700 Sobic001G408800 Sobic001G408800 Sobic010G059200--Sobic001G408800 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic001G104300 Sobic001G104300 Sobic003G165800--Sobic001G104300 Sobic002G141900 Sobic002G141900 Sobic003G165800--Sobic002G141900 Sobic003G165800--Sobic003G420900 Sobic001G021500 Sobic001G021500 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic006G281066 Sobic006G281066 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic009G055900 Sobic009G055900 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic004G291400 Sobic004G291400 Sobic004G124100--Sobic004G291400 Sobic001G468600 Sobic001G468600 Sobic004G124100--Sobic001G468600 Sobic006G002201 Sobic006G002201 Sobic004G124100--Sobic006G002201 Sobic004G248900 Sobic004G248900 Sobic004G124100--Sobic004G248900 Sobic006G010400 Sobic006G010400 Sobic004G124100--Sobic006G010400 Sobic006G157000 Sobic006G157000 Sobic004G124100--Sobic006G157000 Sobic008G118600 Sobic008G118600 Sobic004G124100--Sobic008G118600 Sobic005G105500 Sobic005G105500 Sobic004G124100--Sobic005G105500 Sobic008G103800 Sobic008G103800 Sobic004G124100--Sobic008G103800 Sobic003G420900--Sobic001G376700 Sobic003G420900--Sobic004G296800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic003G420900--Sobic004G275600 Sobic010G134500 Sobic010G134500 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic010G123300--Sobic001G021500 Sobic010G123300--Sobic003G165800 Sobic010G123300--Sobic010G059200 Sobic010G123300--Sobic009G055900 Sobic002G118700 Sobic002G118700 Sobic010G123300--Sobic002G118700 Sobic004G203900 Sobic004G203900 Sobic010G123300--Sobic004G203900 Sobic007G050600 Sobic007G050600 Sobic010G123300--Sobic007G050600 Sobic010G050900 Sobic010G050900 Sobic010G123300--Sobic010G050900 Sobic010G123300--Sobic004G296800 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic002G301200--Sobic001G486700 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic002G301200--Sobic010G059200 Sobic004G296800--Sobic001G376700 Sobic004G296800--Sobic001G543700 Sobic004G044200 Sobic004G044200 Sobic004G296800--Sobic004G044200 Sobic004G296800--Sobic003G420900 Sobic002G207900 Sobic002G207900 Sobic004G296800--Sobic002G207900 Sobic007G026200 Sobic007G026200 Sobic004G296800--Sobic007G026200 Sobic008G123600 Sobic008G123600 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic005G218201 Sobic005G218201 Sobic004G296800--Sobic005G218201 Sobic001G376700--Sobic004G296800 Sobic006G084500 Sobic006G084500 Sobic001G376700--Sobic006G084500 Sobic001G376700--Sobic004G044200 Sobic001G376700--Sobic009G124000 Sobic001G376700--Sobic003G420900 Sobic001G376700--Sobic003G292300 Sobic009G180800 Sobic009G180800 Sobic001G376700--Sobic009G180800 Sobic001G376700--Sobic008G123600 Sobic009G001500 Sobic009G001500 Sobic001G376700--Sobic009G001500 Sobic004G265600 Sobic004G265600 Sobic001G408800--Sobic004G265600 Sobic001G408800--Sobic008G103800 Sobic008G051100 Sobic008G051100 Sobic001G408800--Sobic008G051100 Sobic009G125900 Sobic009G125900 Sobic001G408800--Sobic009G125900 Sobic001G533100 Sobic001G533100 Sobic001G408800--Sobic001G533100 Sobic002G342500 Sobic002G342500 Sobic001G408800--Sobic002G342500 Sobic001G408800--Sobic010G059200 Sobic006G038200 Sobic006G038200 Sobic001G408800--Sobic006G038200 Sobic004G275400 Sobic004G275400 Sobic001G408800--Sobic004G275400
Octagon: transcription factors


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