Gene annotation
Transcriptome id Sobic.004G032100.1,Sobic.004G032100.2
Synonym Sb04g002780
Functional annotation expressed protein
UniProt A0A1Z5RKQ5 , A0A194YNJ7
Pfam PF05705
Panther DB PTHR12265 PTHR12265:SF11
NCBI CDD KOG2521; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19970 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g04110.1 : expressed protein
MaizeGDB (Corn) Zm00025a018891
Brachypodium KQJ93172 , KQJ93171 , PNT65814
Barley HORVU6Hr1G017480.4 , HORVU6Hr1G017480.5 , HORVU6Hr1G017480.1 , HORVU6Hr1G017480.3
Wheat TraesCS6B02G126100 , TraesCS6D02G084700 , TraesCS6A02G097900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.002G305100 mTERF domain containing protein, expressed -
3 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
4 Sobic.009G045900 tRNA synthetase class II core domain containing protein, expressed K01892: HARS, histidyl-tRNA synthetase
5 Sobic.006G208400 expressed protein K14318: nuclear pore complex protein Nup88
6 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
7 Sobic.006G275000 tubulin/FtsZ domain containing protein, putative, expressed K03531: cell division protein FtsZ
8 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
9 Sobic.010G134500 exonuclease, putative, expressed -
10 Sobic.009G140400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
11 Sobic.009G210100 EMB1796, putative, expressed -
12 Sobic.008G051100 RNA polymerase II subunit A C-terminal domain phosphatase ssu72, putative, expressed K15544: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
13 Sobic.006G281000 methyltransferase, putative, expressed -
14 Sobic.004G002200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
15 Sobic.003G209300 - -
16 Sobic.003G267500 expressed protein -
17 Sobic.001G025800 pentatricopeptide, putative, expressed -
18 Sobic.003G314700 expressed protein -
19 Sobic.002G151000 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
20 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -


Gene co-expression network
sample Sobic004G032100 Sobic004G032100 Sobic009G005400 Sobic009G005400 Sobic004G032100--Sobic009G005400 Sobic002G305100 Sobic002G305100 Sobic004G032100--Sobic002G305100 Sobic009G124000 Sobic009G124000 Sobic004G032100--Sobic009G124000 Sobic009G045900 Sobic009G045900 Sobic004G032100--Sobic009G045900 Sobic006G208400 Sobic006G208400 Sobic004G032100--Sobic006G208400 Sobic008G157200 Sobic008G157200 Sobic004G032100--Sobic008G157200 Sobic006G275000 Sobic006G275000 Sobic004G032100--Sobic006G275000 Sobic010G059200 Sobic010G059200 Sobic004G032100--Sobic010G059200 Sobic010G134500 Sobic010G134500 Sobic004G032100--Sobic010G134500 Sobic001G025800 Sobic001G025800 Sobic009G005400--Sobic001G025800 Sobic010G100800 Sobic010G100800 Sobic009G005400--Sobic010G100800 Sobic003G267500 Sobic003G267500 Sobic009G005400--Sobic003G267500 Sobic010G204900 Sobic010G204900 Sobic009G005400--Sobic010G204900 Sobic004G144400 Sobic004G144400 Sobic009G005400--Sobic004G144400 Sobic008G038600 Sobic008G038600 Sobic009G005400--Sobic008G038600 Sobic009G105200 Sobic009G105200 Sobic009G005400--Sobic009G105200 Sobic009G005400--Sobic006G275000 Sobic009G005400--Sobic008G157200 Sobic002G305100--Sobic008G038600 Sobic003G399100 Sobic003G399100 Sobic002G305100--Sobic003G399100 Sobic001G448600 Sobic001G448600 Sobic002G305100--Sobic001G448600 Sobic002G305100--Sobic009G005400 Sobic002G305100--Sobic001G025800 Sobic004G003900 Sobic004G003900 Sobic002G305100--Sobic004G003900 Sobic001G375000 Sobic001G375000 Sobic002G305100--Sobic001G375000 Sobic002G305100--Sobic004G032100 Sobic007G015300 Sobic007G015300 Sobic002G305100--Sobic007G015300 Sobic001G486700 Sobic001G486700 Sobic009G124000--Sobic001G486700 Sobic008G183700 Sobic008G183700 Sobic009G124000--Sobic008G183700 Sobic001G376700 Sobic001G376700 Sobic009G124000--Sobic001G376700 Sobic004G275600 Sobic004G275600 Sobic009G124000--Sobic004G275600 Sobic001G401700 Sobic001G401700 Sobic009G124000--Sobic001G401700 Sobic007G208300 Sobic007G208300 Sobic009G124000--Sobic007G208300 Sobic003G292300 Sobic003G292300 Sobic009G124000--Sobic003G292300 Sobic002G244500 Sobic002G244500 Sobic009G124000--Sobic002G244500 Sobic010G221600 Sobic010G221600 Sobic009G124000--Sobic010G221600 Sobic008G135200 Sobic008G135200 Sobic009G045900--Sobic008G135200 Sobic002G047000 Sobic002G047000 Sobic009G045900--Sobic002G047000 Sobic002G246700 Sobic002G246700 Sobic009G045900--Sobic002G246700 Sobic002G408900 Sobic002G408900 Sobic009G045900--Sobic002G408900 Sobic001G090100 Sobic001G090100 Sobic009G045900--Sobic001G090100 Sobic003G314700 Sobic003G314700 Sobic009G045900--Sobic003G314700 Sobic010G206300 Sobic010G206300 Sobic009G045900--Sobic010G206300 Sobic001G248100 Sobic001G248100 Sobic009G045900--Sobic001G248100 Sobic001G537500 Sobic001G537500 Sobic009G045900--Sobic001G537500 Sobic004G354000 Sobic004G354000 Sobic006G208400--Sobic004G354000 Sobic010G236600 Sobic010G236600 Sobic006G208400--Sobic010G236600 Sobic008G017100 Sobic008G017100 Sobic006G208400--Sobic008G017100 Sobic010G224700 Sobic010G224700 Sobic006G208400--Sobic010G224700 Sobic001G408300 Sobic001G408300 Sobic006G208400--Sobic001G408300 Sobic001G460500 Sobic001G460500 Sobic006G208400--Sobic001G460500 Sobic002G423400 Sobic002G423400 Sobic006G208400--Sobic002G423400 Sobic002G427300 Sobic002G427300 Sobic006G208400--Sobic002G427300 Sobic006G208400--Sobic003G314700 Sobic006G073200 Sobic006G073200 Sobic008G157200--Sobic006G073200 Sobic006G127600 Sobic006G127600 Sobic008G157200--Sobic006G127600 Sobic004G131300 Sobic004G131300 Sobic008G157200--Sobic004G131300 Sobic009G084900 Sobic009G084900 Sobic008G157200--Sobic009G084900 Sobic008G157200--Sobic003G314700 Sobic007G162100 Sobic007G162100 Sobic008G157200--Sobic007G162100 Sobic003G405500 Sobic003G405500 Sobic008G157200--Sobic003G405500 Sobic008G157200--Sobic001G248100 Sobic001G404600 Sobic001G404600 Sobic008G157200--Sobic001G404600 Sobic006G275000--Sobic009G005400 Sobic006G275000--Sobic009G105200 Sobic001G393900 Sobic001G393900 Sobic006G275000--Sobic001G393900 Sobic006G275000--Sobic008G017100 Sobic005G026400 Sobic005G026400 Sobic006G275000--Sobic005G026400 Sobic006G275000--Sobic004G354000 Sobic007G225000 Sobic007G225000 Sobic006G275000--Sobic007G225000 Sobic010G262100 Sobic010G262100 Sobic006G275000--Sobic010G262100 Sobic006G275000--Sobic010G224700 Sobic010G059200--Sobic009G124000 Sobic003G165800 Sobic003G165800 Sobic010G059200--Sobic003G165800 Sobic004G124100 Sobic004G124100 Sobic010G059200--Sobic004G124100 Sobic003G420900 Sobic003G420900 Sobic010G059200--Sobic003G420900 Sobic010G123300 Sobic010G123300 Sobic010G059200--Sobic010G123300 Sobic002G301200 Sobic002G301200 Sobic010G059200--Sobic002G301200 Sobic004G296800 Sobic004G296800 Sobic010G059200--Sobic004G296800 Sobic010G059200--Sobic001G376700 Sobic001G408800 Sobic001G408800 Sobic010G059200--Sobic001G408800 Sobic009G210100 Sobic009G210100 Sobic010G134500--Sobic009G210100 Sobic001G104300 Sobic001G104300 Sobic010G134500--Sobic001G104300 Sobic002G078000 Sobic002G078000 Sobic010G134500--Sobic002G078000 Sobic007G070000 Sobic007G070000 Sobic010G134500--Sobic007G070000 Sobic010G134500--Sobic003G267500 Sobic010G134500--Sobic003G420900 Sobic005G022000 Sobic005G022000 Sobic010G134500--Sobic005G022000 Sobic002G363500 Sobic002G363500 Sobic010G134500--Sobic002G363500 Sobic001G161400 Sobic001G161400 Sobic010G134500--Sobic001G161400
Octagon: transcription factors


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