Gene annotation
Transcriptome id Sobic.009G210100.1
Synonym emb1796, Sb09g026630
Functional annotation EMB1796, putative, expressed
UniProt C5YUG8
Pfam PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF906
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49240 : Pentatricopeptide repeat (PPR) superfamily protein
RAP-DB (Rice) LOC_Os05g45760.1 : EMB1796, putative, expressed
MaizeGDB (Corn) Zm00025a044248
Brachypodium KQK05219
Barley HORVU1Hr1G080900.2 , HORVU1Hr1G080900.3 , HORVU1Hr1G080900.1 , HORVU1Hr1G080900.6 , HORVU1Hr1G080900.7 , HORVU1Hr1G080900.4 , HORVU1Hr1G080900.5 , HORVU1Hr1G080900.8 , HORVU1Hr1G080900.9 , HORVU1Hr1G080900.10 , HORVU1Hr1G080900.11 , HORVU1Hr1G080900.12 , HORVU1Hr1G080900.13 , HORVU1Hr1G080900.14 , HORVU1Hr1G080900.15 , HORVU1Hr1G080900.16 , HORVU1Hr1G080900.17
Wheat -
Populus -


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cDNA sequences
Sobic.009G210100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G134500 exonuclease, putative, expressed -
2 Sobic.009G161100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
3 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
4 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
5 Sobic.009G093900 rhodanese-like domain containing protein, putative, expressed -
6 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
7 Sobic.002G013700 PPR2, putative, expressed -
8 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
9 Sobic.002G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
10 Sobic.003G267500 expressed protein -
11 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
12 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.002G305100 mTERF domain containing protein, expressed -
14 Sobic.004G032100 expressed protein -
15 Sobic.005G218201 - -
16 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.002G065000 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
18 Sobic.003G209300 - -
19 Sobic.003G287000 BURP domain containing protein, expressed -
20 Sobic.001G347800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Homologous to Arabidopsis heme oxygenase 1 (AtHO1)(PubMedID : 11402195)@heme oxygenase 2, putative, expressed -


Gene co-expression network
sample Sobic009G210100 Sobic009G210100 Sobic010G134500 Sobic010G134500 Sobic009G210100--Sobic010G134500 Sobic009G161100 Sobic009G161100 Sobic009G210100--Sobic009G161100 Sobic005G022000 Sobic005G022000 Sobic009G210100--Sobic005G022000 Sobic001G472000 Sobic001G472000 Sobic009G210100--Sobic001G472000 Sobic009G093900 Sobic009G093900 Sobic009G210100--Sobic009G093900 Sobic010G011200 Sobic010G011200 Sobic009G210100--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic009G210100--Sobic002G013700 Sobic002G225000 Sobic002G225000 Sobic009G210100--Sobic002G225000 Sobic002G360200 Sobic002G360200 Sobic009G210100--Sobic002G360200 Sobic010G134500--Sobic009G210100 Sobic001G104300 Sobic001G104300 Sobic010G134500--Sobic001G104300 Sobic002G078000 Sobic002G078000 Sobic010G134500--Sobic002G078000 Sobic007G070000 Sobic007G070000 Sobic010G134500--Sobic007G070000 Sobic003G267500 Sobic003G267500 Sobic010G134500--Sobic003G267500 Sobic003G420900 Sobic003G420900 Sobic010G134500--Sobic003G420900 Sobic010G134500--Sobic005G022000 Sobic002G363500 Sobic002G363500 Sobic010G134500--Sobic002G363500 Sobic001G161400 Sobic001G161400 Sobic010G134500--Sobic001G161400 Sobic009G161100--Sobic001G472000 Sobic005G200600 Sobic005G200600 Sobic009G161100--Sobic005G200600 Sobic002G141100 Sobic002G141100 Sobic009G161100--Sobic002G141100 Sobic005G218600 Sobic005G218600 Sobic009G161100--Sobic005G218600 Sobic004G249400 Sobic004G249400 Sobic009G161100--Sobic004G249400 Sobic001G541300 Sobic001G541300 Sobic009G161100--Sobic001G541300 Sobic006G238100 Sobic006G238100 Sobic009G161100--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic009G161100--Sobic002G209800 Sobic001G315200 Sobic001G315200 Sobic009G161100--Sobic001G315200 Sobic005G022000--Sobic002G078000 Sobic005G022000--Sobic001G104300 Sobic005G022000--Sobic002G363500 Sobic006G281066 Sobic006G281066 Sobic005G022000--Sobic006G281066 Sobic006G114300 Sobic006G114300 Sobic005G022000--Sobic006G114300 Sobic007G026200 Sobic007G026200 Sobic005G022000--Sobic007G026200 Sobic005G022000--Sobic002G360200 Sobic007G166600 Sobic007G166600 Sobic005G022000--Sobic007G166600 Sobic001G389500 Sobic001G389500 Sobic005G022000--Sobic001G389500 Sobic008G189500 Sobic008G189500 Sobic001G472000--Sobic008G189500 Sobic003G007800 Sobic003G007800 Sobic001G472000--Sobic003G007800 Sobic005G029400 Sobic005G029400 Sobic001G472000--Sobic005G029400 Sobic001G472000--Sobic009G161100 Sobic009G070600 Sobic009G070600 Sobic001G472000--Sobic009G070600 Sobic001G255300 Sobic001G255300 Sobic001G472000--Sobic001G255300 Sobic001G472000--Sobic001G315200 Sobic001G472000--Sobic001G541300 Sobic001G472000--Sobic004G249400 Sobic002G431300 Sobic002G431300 Sobic009G093900--Sobic002G431300 Sobic006G055800 Sobic006G055800 Sobic009G093900--Sobic006G055800 Sobic009G168600 Sobic009G168600 Sobic009G093900--Sobic009G168600 Sobic006G186600 Sobic006G186600 Sobic009G093900--Sobic006G186600 Sobic008G089500 Sobic008G089500 Sobic009G093900--Sobic008G089500 Sobic006G128300 Sobic006G128300 Sobic009G093900--Sobic006G128300 Sobic004G144400 Sobic004G144400 Sobic009G093900--Sobic004G144400 Sobic004G016400 Sobic004G016400 Sobic009G093900--Sobic004G016400 Sobic004G336000 Sobic004G336000 Sobic009G093900--Sobic004G336000 Sobic005G110481 Sobic005G110481 Sobic010G011200--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic001G148200 Sobic001G148200 Sobic010G011200--Sobic001G148200 Sobic010G011200--Sobic002G013700 Sobic009G001500 Sobic009G001500 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic009G104700 Sobic009G104700 Sobic010G011200--Sobic009G104700 Sobic009G098100 Sobic009G098100 Sobic010G011200--Sobic009G098100 Sobic002G013700--Sobic005G110481 Sobic002G013700--Sobic007G171800 Sobic002G013700--Sobic010G011200 Sobic007G101300 Sobic007G101300 Sobic002G013700--Sobic007G101300 Sobic002G251400 Sobic002G251400 Sobic002G013700--Sobic002G251400 Sobic002G013700--Sobic009G104700 Sobic002G158800 Sobic002G158800 Sobic002G013700--Sobic002G158800 Sobic002G013700--Sobic001G148200 Sobic009G042200 Sobic009G042200 Sobic002G013700--Sobic009G042200 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic003G078300 Sobic003G078300 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic010G165100 Sobic010G165100 Sobic002G225000--Sobic010G165100 Sobic003G148400 Sobic003G148400 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G225000--Sobic002G078000 Sobic001G172300 Sobic001G172300 Sobic002G360200--Sobic001G172300 Sobic002G360200--Sobic010G012900 Sobic001G013900 Sobic001G013900 Sobic002G360200--Sobic001G013900 Sobic004G253800 Sobic004G253800 Sobic002G360200--Sobic004G253800 Sobic001G188600 Sobic001G188600 Sobic002G360200--Sobic001G188600 Sobic002G360200--Sobic010G011200 Sobic002G360200--Sobic006G114300 Sobic002G360200--Sobic002G078000 Sobic001G357200 Sobic001G357200 Sobic002G360200--Sobic001G357200
Octagon: transcription factors


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