Gene annotation
Transcriptome id Sobic.002G065000.1
Synonym AHA11, Sb02g005440, HA11
Functional annotation plasma membrane ATPase, putative, expressed
UniProt C5XBY1
Pfam PF00690 PF00702 PF00122
Panther DB PTHR24093 PTHR24093:SF264
NCBI CDD -
KEGG Orthology K01535; PMA1, H+-transporting ATPase
Gene Ontology GO:0000166; nucleotide binding


Orthologs (automatic annotation)
TAIR AT5G62670 : H(+)-ATPase 11
RAP-DB (Rice) LOC_Os07g09340.1 : plasma membrane ATPase, putative, expressed
MaizeGDB (Corn) Zm00025a016041 , Zm00025a007653 , Zm00025a032923 , Zm00025a045279 , Zm00025a047528
Brachypodium KQK20491 , KQJ85604 , PNT62257
Barley HORVU4Hr1G004820.30 , HORVU4Hr1G004820.8 , HORVU4Hr1G004820.9 , HORVU4Hr1G004820.6 , HORVU4Hr1G004820.7 , HORVU2Hr1G111640.17 , HORVU2Hr1G111640.16 , HORVU2Hr1G111640.9 , HORVU2Hr1G111640.8 , HORVU2Hr1G111640.3 , HORVU2Hr1G111640.2 , HORVU2Hr1G111640.1 , HORVU2Hr1G111640.7 , HORVU2Hr1G111640.6 , HORVU2Hr1G111640.5 , HORVU2Hr1G111640.4 , HORVU2Hr1G111640.19 , HORVU2Hr1G111640.18 , HORVU2Hr1G111640.13 , HORVU2Hr1G111640.23 , HORVU2Hr1G111640.20 , HORVU2Hr1G111640.21 , HORVU2Hr1G111640.26 , HORVU2Hr1G111640.24 , HORVU2Hr1G111640.25 , HORVU4Hr1G004820.12 , HORVU4Hr1G004820.13 , HORVU4Hr1G004820.10 , HORVU4Hr1G004820.11 , HORVU4Hr1G004820.16 , HORVU4Hr1G004820.17 , HORVU4Hr1G004820.14 , HORVU4Hr1G004820.15 , HORVU4Hr1G004820.18 , HORVU4Hr1G004820.19 , HORVU4Hr1G004820.29 , HORVU4Hr1G004820.28 , HORVU4Hr1G004820.23 , HORVU4Hr1G004820.22 , HORVU4Hr1G004820.21 , HORVU4Hr1G004820.20 , HORVU4Hr1G004820.27 , HORVU4Hr1G004820.26 , HORVU4Hr1G004820.25 , HORVU4Hr1G004820.24 , HORVU2Hr1G111640.12 , HORVU2Hr1G111640.11 , HORVU2Hr1G111640.14 , HORVU0Hr1G017350.8 , HORVU0Hr1G017350.9 , HORVU0Hr1G017350.6 , HORVU0Hr1G017350.7 , HORVU0Hr1G017350.4 , HORVU0Hr1G017350.5 , HORVU0Hr1G017350.2 , HORVU0Hr1G017350.3 , HORVU0Hr1G017350.1 , HORVU4Hr1G004820.1 , HORVU4Hr1G004820.2 , HORVU4Hr1G004820.4 , HORVU4Hr1G004820.5
Wheat TraesCS7D02G146700 , TraesCS6B02G393400 , TraesCS7A02G145400 , TraesCS6D02G344000 , TraesCS4A02G282900 , TraesCS4A02G282900 , TraesCS4A02G282900 , TraesCS4A02G282900 , TraesCS4A02G282900 , TraesCS4B02G031000 , TraesCS4B02G031000 , TraesCS6A02G360500 , TraesCS4A02G282900
Populus PNT54867 , PNT54866 , PNT54865 , PNT54864 , PNT54870 , PNT54869 , PNT54868


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cDNA sequences
Sobic.002G065000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G210100 EMB1796, putative, expressed -
2 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
3 Sobic.004G319000 OsSub22 - Putative Subtilisin homologue, expressed -
4 Sobic.002G314800 monocopper oxidase, putative, expressed -
5 Sobic.009G111500 expressed protein -
6 Sobic.010G228100 "DEP3(Ortholog in rice:Qiao et al., 2011)"(PubMedID : 31659937)@PLA IIIA/PLP7, putative, expressed -
7 Sobic.002G208200 CSLC2 - cellulose synthase-like family C, expressed -
8 Sobic.005G071800 - -
9 Sobic.002G301200 OsSCP39 - Putative Serine Carboxypeptidase homologue, expressed K16298: serine carboxypeptidase-like clade IV
10 Sobic.010G078300 leaf senescence related protein, putative, expressed -
11 Sobic.007G190200 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
12 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
13 Sobic.001G334900 X8 domain containing protein, expressed -
14 Sobic.008G133200 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
17 Sobic.006G249400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glutamine synthetase, catalytic domain containing protein, expressed K01915: glnA, glutamine synthetase
18 Sobic.001G462200 mannose-1-phosphate guanyltransferase, putative, expressed K00966: mannose-1-phosphate guanylyltransferase
19 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
20 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic002G065000 Sobic002G065000 Sobic009G210100 Sobic009G210100 Sobic002G065000--Sobic009G210100 Sobic001G408800 Sobic001G408800 Sobic002G065000--Sobic001G408800 Sobic004G319000 Sobic004G319000 Sobic002G065000--Sobic004G319000 Sobic002G314800 Sobic002G314800 Sobic002G065000--Sobic002G314800 Sobic009G111500 Sobic009G111500 Sobic002G065000--Sobic009G111500 Sobic010G228100 Sobic010G228100 Sobic002G065000--Sobic010G228100 Sobic002G208200 Sobic002G208200 Sobic002G065000--Sobic002G208200 Sobic005G071800 Sobic005G071800 Sobic002G065000--Sobic005G071800 Sobic002G301200 Sobic002G301200 Sobic002G065000--Sobic002G301200 Sobic010G134500 Sobic010G134500 Sobic009G210100--Sobic010G134500 Sobic009G161100 Sobic009G161100 Sobic009G210100--Sobic009G161100 Sobic005G022000 Sobic005G022000 Sobic009G210100--Sobic005G022000 Sobic001G472000 Sobic001G472000 Sobic009G210100--Sobic001G472000 Sobic009G093900 Sobic009G093900 Sobic009G210100--Sobic009G093900 Sobic010G011200 Sobic010G011200 Sobic009G210100--Sobic010G011200 Sobic002G013700 Sobic002G013700 Sobic009G210100--Sobic002G013700 Sobic002G225000 Sobic002G225000 Sobic009G210100--Sobic002G225000 Sobic002G360200 Sobic002G360200 Sobic009G210100--Sobic002G360200 Sobic004G265600 Sobic004G265600 Sobic001G408800--Sobic004G265600 Sobic008G103800 Sobic008G103800 Sobic001G408800--Sobic008G103800 Sobic008G051100 Sobic008G051100 Sobic001G408800--Sobic008G051100 Sobic009G125900 Sobic009G125900 Sobic001G408800--Sobic009G125900 Sobic001G533100 Sobic001G533100 Sobic001G408800--Sobic001G533100 Sobic002G342500 Sobic002G342500 Sobic001G408800--Sobic002G342500 Sobic010G059200 Sobic010G059200 Sobic001G408800--Sobic010G059200 Sobic006G038200 Sobic006G038200 Sobic001G408800--Sobic006G038200 Sobic004G275400 Sobic004G275400 Sobic001G408800--Sobic004G275400 Sobic005G080050 Sobic005G080050 Sobic004G319000--Sobic005G080050 Sobic008G066700 Sobic008G066700 Sobic004G319000--Sobic008G066700 Sobic001G353800 Sobic001G353800 Sobic004G319000--Sobic001G353800 Sobic002G175400 Sobic002G175400 Sobic004G319000--Sobic002G175400 Sobic003G261200 Sobic003G261200 Sobic004G319000--Sobic003G261200 Sobic003G383800 Sobic003G383800 Sobic004G319000--Sobic003G383800 Sobic004G319000--Sobic002G314800 Sobic004G319000--Sobic009G161100 Sobic004G319000--Sobic002G065000 Sobic010G078300 Sobic010G078300 Sobic002G314800--Sobic010G078300 Sobic001G099300 Sobic001G099300 Sobic002G314800--Sobic001G099300 Sobic010G022000 Sobic010G022000 Sobic002G314800--Sobic010G022000 Sobic002G314800--Sobic008G066700 Sobic007G000700 Sobic007G000700 Sobic002G314800--Sobic007G000700 Sobic002G314800--Sobic010G228100 Sobic008G133200 Sobic008G133200 Sobic002G314800--Sobic008G133200 Sobic006G219200 Sobic006G219200 Sobic002G314800--Sobic006G219200 Sobic009G151100 Sobic009G151100 Sobic002G314800--Sobic009G151100 Sobic010G048600 Sobic010G048600 Sobic009G111500--Sobic010G048600 Sobic010G169200 Sobic010G169200 Sobic009G111500--Sobic010G169200 Sobic005G070700 Sobic005G070700 Sobic009G111500--Sobic005G070700 Sobic001G459300 Sobic001G459300 Sobic009G111500--Sobic001G459300 Sobic004G277700 Sobic004G277700 Sobic009G111500--Sobic004G277700 Sobic001G456000 Sobic001G456000 Sobic009G111500--Sobic001G456000 Sobic001G274300 Sobic001G274300 Sobic009G111500--Sobic001G274300 Sobic001G106500 Sobic001G106500 Sobic009G111500--Sobic001G106500 Sobic007G218400 Sobic007G218400 Sobic009G111500--Sobic007G218400 Sobic001G334900 Sobic001G334900 Sobic010G228100--Sobic001G334900 Sobic003G006100 Sobic003G006100 Sobic010G228100--Sobic003G006100 Sobic001G037400 Sobic001G037400 Sobic010G228100--Sobic001G037400 Sobic009G232200 Sobic009G232200 Sobic010G228100--Sobic009G232200 Sobic004G243800 Sobic004G243800 Sobic010G228100--Sobic004G243800 Sobic009G033400 Sobic009G033400 Sobic010G228100--Sobic009G033400 Sobic004G168700 Sobic004G168700 Sobic010G228100--Sobic004G168700 Sobic003G031400 Sobic003G031400 Sobic010G228100--Sobic003G031400 Sobic010G096100 Sobic010G096100 Sobic010G228100--Sobic010G096100 Sobic001G159800 Sobic001G159800 Sobic002G208200--Sobic001G159800 Sobic002G208200--Sobic009G125900 Sobic009G063400 Sobic009G063400 Sobic002G208200--Sobic009G063400 Sobic002G208200--Sobic001G408800 Sobic007G139500 Sobic007G139500 Sobic002G208200--Sobic007G139500 Sobic001G196000 Sobic001G196000 Sobic002G208200--Sobic001G196000 Sobic003G053700 Sobic003G053700 Sobic002G208200--Sobic003G053700 Sobic001G437500 Sobic001G437500 Sobic002G208200--Sobic001G437500 Sobic002G208200--Sobic004G265600 Sobic005G012800 Sobic005G012800 Sobic005G071800--Sobic005G012800 Sobic005G093500 Sobic005G093500 Sobic005G071800--Sobic005G093500 Sobic005G071800--Sobic009G063400 Sobic005G071800--Sobic001G196000 Sobic006G256200 Sobic006G256200 Sobic005G071800--Sobic006G256200 Sobic005G071800--Sobic010G096100 Sobic002G064600 Sobic002G064600 Sobic005G071800--Sobic002G064600 Sobic003G258800 Sobic003G258800 Sobic005G071800--Sobic003G258800 Sobic002G083600 Sobic002G083600 Sobic005G071800--Sobic002G083600 Sobic005G004100 Sobic005G004100 Sobic002G301200--Sobic005G004100 Sobic001G486700 Sobic001G486700 Sobic002G301200--Sobic001G486700 Sobic003G420900 Sobic003G420900 Sobic002G301200--Sobic003G420900 Sobic002G321400 Sobic002G321400 Sobic002G301200--Sobic002G321400 Sobic004G275600 Sobic004G275600 Sobic002G301200--Sobic004G275600 Sobic009G256000 Sobic009G256000 Sobic002G301200--Sobic009G256000 Sobic007G130800 Sobic007G130800 Sobic002G301200--Sobic007G130800 Sobic004G314500 Sobic004G314500 Sobic002G301200--Sobic004G314500 Sobic002G301200--Sobic010G059200
Octagon: transcription factors


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