Gene annotation
Transcriptome id Sobic.010G078300.1
Synonym Sb10g006800, TBR
Functional annotation leaf senescence related protein, putative, expressed
UniProt C5Z6D4
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06700 : Plant protein of unknown function (DUF828)
RAP-DB (Rice) LOC_Os06g10560.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a049615 , Zm00025a052557 , Zm00025a033050
Brachypodium KQK19086 , KQK19084 , PNT76243 , KQK01675 , KQK19085
Barley HORVU6Hr1G078930.13 , HORVU6Hr1G078930.12 , HORVU6Hr1G078930.11 , HORVU6Hr1G078930.10 , HORVU6Hr1G078930.14 , HORVU7Hr1G035050.2 , HORVU7Hr1G035050.3 , HORVU7Hr1G035050.4 , HORVU6Hr1G078930.9 , HORVU6Hr1G078930.8 , HORVU6Hr1G078930.3 , HORVU6Hr1G078930.2 , HORVU6Hr1G078930.1 , HORVU6Hr1G078930.7 , HORVU6Hr1G078930.5 , HORVU6Hr1G078930.4 , HORVU7Hr1G035050.1
Wheat TraesCS6A02G323200 , TraesCS7D02G168300 , TraesCS7A02G167500 , TraesCS7B02G072300 , TraesCS4D02G184700 , TraesCS4D02G184700 , TraesCS6D02G303000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G022000 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
3 Sobic.002G314800 monocopper oxidase, putative, expressed -
4 Sobic.001G518000 protein kinase, putative, expressed -
5 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
8 Sobic.003G401800 expressed protein -
9 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
11 Sobic.002G417000 expressed protein -
12 Sobic.006G014400 pectate lyase precursor, putative, expressed K01728: pectate lyase
13 Sobic.006G065400 expressed protein -
14 Sobic.002G370400 expressed protein -
15 Sobic.002G276600 endoglucanase, putative, expressed -
16 Sobic.007G128100 expressed protein -
17 Sobic.009G173200 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
18 Sobic.002G360500 expressed protein -
19 Sobic.001G138800 GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
20 Sobic.009G128800 expressed protein -


Gene co-expression network
sample Sobic010G078300 Sobic010G078300 Sobic010G022000 Sobic010G022000 Sobic010G078300--Sobic010G022000 Sobic007G000700 Sobic007G000700 Sobic010G078300--Sobic007G000700 Sobic002G314800 Sobic002G314800 Sobic010G078300--Sobic002G314800 Sobic001G518000 Sobic001G518000 Sobic010G078300--Sobic001G518000 Sobic010G211800 Sobic010G211800 Sobic010G078300--Sobic010G211800 Sobic010G092400 Sobic010G092400 Sobic010G078300--Sobic010G092400 Sobic009G216300 Sobic009G216300 Sobic010G078300--Sobic009G216300 Sobic003G401800 Sobic003G401800 Sobic010G078300--Sobic003G401800 Sobic005G062600 Sobic005G062600 Sobic010G078300--Sobic005G062600 Sobic010G022000--Sobic010G078300 Sobic006G065400 Sobic006G065400 Sobic010G022000--Sobic006G065400 Sobic003G238800 Sobic003G238800 Sobic010G022000--Sobic003G238800 Sobic001G138800 Sobic001G138800 Sobic010G022000--Sobic001G138800 Sobic010G022000--Sobic005G062600 Sobic010G022000--Sobic002G314800 Sobic002G343600 Sobic002G343600 Sobic010G022000--Sobic002G343600 Sobic007G137101 Sobic007G137101 Sobic010G022000--Sobic007G137101 Sobic006G232900 Sobic006G232900 Sobic010G022000--Sobic006G232900 Sobic007G000700--Sobic003G401800 Sobic006G081000 Sobic006G081000 Sobic007G000700--Sobic006G081000 Sobic003G226700 Sobic003G226700 Sobic007G000700--Sobic003G226700 Sobic002G320600 Sobic002G320600 Sobic007G000700--Sobic002G320600 Sobic007G000700--Sobic010G092400 Sobic007G000700--Sobic010G078300 Sobic003G078300 Sobic003G078300 Sobic007G000700--Sobic003G078300 Sobic007G000700--Sobic005G062600 Sobic003G289800 Sobic003G289800 Sobic007G000700--Sobic003G289800 Sobic002G314800--Sobic010G078300 Sobic001G099300 Sobic001G099300 Sobic002G314800--Sobic001G099300 Sobic002G314800--Sobic010G022000 Sobic008G066700 Sobic008G066700 Sobic002G314800--Sobic008G066700 Sobic002G314800--Sobic007G000700 Sobic010G228100 Sobic010G228100 Sobic002G314800--Sobic010G228100 Sobic008G133200 Sobic008G133200 Sobic002G314800--Sobic008G133200 Sobic006G219200 Sobic006G219200 Sobic002G314800--Sobic006G219200 Sobic009G151100 Sobic009G151100 Sobic002G314800--Sobic009G151100 Sobic002G360500 Sobic002G360500 Sobic001G518000--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic001G518000--Sobic002G417000 Sobic003G307200 Sobic003G307200 Sobic001G518000--Sobic003G307200 Sobic010G014500 Sobic010G014500 Sobic001G518000--Sobic010G014500 Sobic007G165800 Sobic007G165800 Sobic001G518000--Sobic007G165800 Sobic001G518000--Sobic010G211800 Sobic001G493900 Sobic001G493900 Sobic001G518000--Sobic001G493900 Sobic008G038200 Sobic008G038200 Sobic001G518000--Sobic008G038200 Sobic004G003700 Sobic004G003700 Sobic001G518000--Sobic004G003700 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic010G211800--Sobic002G360500 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic002G142500 Sobic002G142500 Sobic009G216300--Sobic002G142500 Sobic009G216300--Sobic001G518000 Sobic009G128800 Sobic009G128800 Sobic009G216300--Sobic009G128800 Sobic009G235700 Sobic009G235700 Sobic009G216300--Sobic009G235700 Sobic010G165100 Sobic010G165100 Sobic009G216300--Sobic010G165100 Sobic009G216300--Sobic009G151100 Sobic009G216300--Sobic010G211800 Sobic001G522300 Sobic001G522300 Sobic009G216300--Sobic001G522300 Sobic009G216300--Sobic002G045200 Sobic003G401800--Sobic007G000700 Sobic003G401800--Sobic003G226700 Sobic003G401800--Sobic003G078300 Sobic003G401800--Sobic010G211800 Sobic003G401800--Sobic002G320600 Sobic003G401800--Sobic009G128800 Sobic001G437500 Sobic001G437500 Sobic003G401800--Sobic001G437500 Sobic001G425700 Sobic001G425700 Sobic003G401800--Sobic001G425700 Sobic010G165900 Sobic010G165900 Sobic003G401800--Sobic010G165900 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic005G062600--Sobic001G493900 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900
Octagon: transcription factors


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