Gene annotation
Transcriptome id Sobic.010G022000.1
Synonym Sb10g002090
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt Q5NKT2
Pfam PF00561
Panther DB PTHR10992 PTHR10992:SF875
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G24140 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g04169.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041392 , Zm00025a003118 , Zm00025a050164
Brachypodium KQJ97566 , KQK19726
Barley HORVU7Hr1G012650.1 , HORVU7Hr1G012630.5 , HORVU7Hr1G012630.4 , HORVU7Hr1G012630.6 , HORVU7Hr1G012630.1 , HORVU7Hr1G012630.3 , HORVU7Hr1G012630.2
Wheat TraesCS1B02G193600 , TraesCS1D02G190800 , TraesCS7D02G063500 , TraesCS1A02G185800 , TraesCS4A02G419700 , TraesCS7A02G068800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G078300 leaf senescence related protein, putative, expressed -
2 Sobic.006G065400 expressed protein -
3 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.001G138800 GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
5 Sobic.005G062600 MLO domain containing protein, putative, expressed K08472: mlo protein
6 Sobic.002G314800 monocopper oxidase, putative, expressed -
7 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
8 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
9 Sobic.006G232900 expressed protein -
10 Sobic.006G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@- -
11 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
12 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
13 Sobic.001G071600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
14 Sobic.007G033700 OsFBX309 - F-box domain containing protein, expressed -
15 Sobic.001G175100 DEK C terminal domain containing protein, expressed -
16 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
17 Sobic.003G046400 transcriptional corepressor LEUNIG, putative, expressed -
18 Sobic.002G426000 - -
19 Sobic.010G169200 homeobox domain containing protein, expressed -
20 Sobic.004G307800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659889)@expressed protein -


Gene co-expression network
sample Sobic010G022000 Sobic010G022000 Sobic010G078300 Sobic010G078300 Sobic010G022000--Sobic010G078300 Sobic006G065400 Sobic006G065400 Sobic010G022000--Sobic006G065400 Sobic003G238800 Sobic003G238800 Sobic010G022000--Sobic003G238800 Sobic001G138800 Sobic001G138800 Sobic010G022000--Sobic001G138800 Sobic005G062600 Sobic005G062600 Sobic010G022000--Sobic005G062600 Sobic002G314800 Sobic002G314800 Sobic010G022000--Sobic002G314800 Sobic002G343600 Sobic002G343600 Sobic010G022000--Sobic002G343600 Sobic007G137101 Sobic007G137101 Sobic010G022000--Sobic007G137101 Sobic006G232900 Sobic006G232900 Sobic010G022000--Sobic006G232900 Sobic010G078300--Sobic010G022000 Sobic007G000700 Sobic007G000700 Sobic010G078300--Sobic007G000700 Sobic010G078300--Sobic002G314800 Sobic001G518000 Sobic001G518000 Sobic010G078300--Sobic001G518000 Sobic010G211800 Sobic010G211800 Sobic010G078300--Sobic010G211800 Sobic010G092400 Sobic010G092400 Sobic010G078300--Sobic010G092400 Sobic009G216300 Sobic009G216300 Sobic010G078300--Sobic009G216300 Sobic003G401800 Sobic003G401800 Sobic010G078300--Sobic003G401800 Sobic010G078300--Sobic005G062600 Sobic010G119300 Sobic010G119300 Sobic006G065400--Sobic010G119300 Sobic007G132900 Sobic007G132900 Sobic006G065400--Sobic007G132900 Sobic004G198100 Sobic004G198100 Sobic006G065400--Sobic004G198100 Sobic009G120700 Sobic009G120700 Sobic006G065400--Sobic009G120700 Sobic001G091500 Sobic001G091500 Sobic006G065400--Sobic001G091500 Sobic005G005700 Sobic005G005700 Sobic006G065400--Sobic005G005700 Sobic001G477400 Sobic001G477400 Sobic006G065400--Sobic001G477400 Sobic001G160100 Sobic001G160100 Sobic006G065400--Sobic001G160100 Sobic003G102000 Sobic003G102000 Sobic006G065400--Sobic003G102000 Sobic002G268300 Sobic002G268300 Sobic003G238800--Sobic002G268300 Sobic002G344201 Sobic002G344201 Sobic003G238800--Sobic002G344201 Sobic003G231000 Sobic003G231000 Sobic003G238800--Sobic003G231000 Sobic004G350500 Sobic004G350500 Sobic003G238800--Sobic004G350500 Sobic004G254300 Sobic004G254300 Sobic003G238800--Sobic004G254300 Sobic001G313800 Sobic001G313800 Sobic003G238800--Sobic001G313800 Sobic010G169200 Sobic010G169200 Sobic003G238800--Sobic010G169200 Sobic001G456000 Sobic001G456000 Sobic003G238800--Sobic001G456000 Sobic010G220800 Sobic010G220800 Sobic003G238800--Sobic010G220800 Sobic004G237000 Sobic004G237000 Sobic001G138800--Sobic004G237000 Sobic007G033700 Sobic007G033700 Sobic001G138800--Sobic007G033700 Sobic003G316601 Sobic003G316601 Sobic001G138800--Sobic003G316601 Sobic002G426000 Sobic002G426000 Sobic001G138800--Sobic002G426000 Sobic003G046400 Sobic003G046400 Sobic001G138800--Sobic003G046400 Sobic007G147200 Sobic007G147200 Sobic001G138800--Sobic007G147200 Sobic010G070900 Sobic010G070900 Sobic001G138800--Sobic010G070900 Sobic001G138800--Sobic003G238800 Sobic001G138800--Sobic010G169200 Sobic004G267600 Sobic004G267600 Sobic005G062600--Sobic004G267600 Sobic005G062600--Sobic010G092400 Sobic007G121600 Sobic007G121600 Sobic005G062600--Sobic007G121600 Sobic001G079900 Sobic001G079900 Sobic005G062600--Sobic001G079900 Sobic010G129700 Sobic010G129700 Sobic005G062600--Sobic010G129700 Sobic007G161600 Sobic007G161600 Sobic005G062600--Sobic007G161600 Sobic001G493900 Sobic001G493900 Sobic005G062600--Sobic001G493900 Sobic008G070700 Sobic008G070700 Sobic005G062600--Sobic008G070700 Sobic003G019900 Sobic003G019900 Sobic005G062600--Sobic003G019900 Sobic002G314800--Sobic010G078300 Sobic001G099300 Sobic001G099300 Sobic002G314800--Sobic001G099300 Sobic002G314800--Sobic010G022000 Sobic008G066700 Sobic008G066700 Sobic002G314800--Sobic008G066700 Sobic002G314800--Sobic007G000700 Sobic010G228100 Sobic010G228100 Sobic002G314800--Sobic010G228100 Sobic008G133200 Sobic008G133200 Sobic002G314800--Sobic008G133200 Sobic006G219200 Sobic006G219200 Sobic002G314800--Sobic006G219200 Sobic009G151100 Sobic009G151100 Sobic002G314800--Sobic009G151100 Sobic006G076000 Sobic006G076000 Sobic002G343600--Sobic006G076000 Sobic004G086500 Sobic004G086500 Sobic002G343600--Sobic004G086500 Sobic004G277700 Sobic004G277700 Sobic002G343600--Sobic004G277700 Sobic006G031900 Sobic006G031900 Sobic002G343600--Sobic006G031900 Sobic009G059800 Sobic009G059800 Sobic002G343600--Sobic009G059800 Sobic010G048600 Sobic010G048600 Sobic002G343600--Sobic010G048600 Sobic002G343600--Sobic001G456000 Sobic007G218400 Sobic007G218400 Sobic002G343600--Sobic007G218400 Sobic009G059932 Sobic009G059932 Sobic002G343600--Sobic009G059932 Sobic007G121200 Sobic007G121200 Sobic007G137101--Sobic007G121200 Sobic001G106500 Sobic001G106500 Sobic007G137101--Sobic001G106500 Sobic007G137101--Sobic001G456000 Sobic010G183800 Sobic010G183800 Sobic007G137101--Sobic010G183800 Sobic010G255000 Sobic010G255000 Sobic007G137101--Sobic010G255000 Sobic007G137101--Sobic010G048600 Sobic001G459300 Sobic001G459300 Sobic007G137101--Sobic001G459300 Sobic003G092300 Sobic003G092300 Sobic007G137101--Sobic003G092300 Sobic001G459400 Sobic001G459400 Sobic007G137101--Sobic001G459400 Sobic006G221800 Sobic006G221800 Sobic006G232900--Sobic006G221800 Sobic005G168400 Sobic005G168400 Sobic006G232900--Sobic005G168400 Sobic001G143400 Sobic001G143400 Sobic006G232900--Sobic001G143400 Sobic004G003700 Sobic004G003700 Sobic006G232900--Sobic004G003700 Sobic001G101700 Sobic001G101700 Sobic006G232900--Sobic001G101700 Sobic006G232900--Sobic010G255000 Sobic006G232900--Sobic004G198100 Sobic006G232900--Sobic010G220800 Sobic006G232900--Sobic007G147200
Octagon: transcription factors


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