Gene annotation
Transcriptome id Sobic.009G173200.1
Synonym CHAL, SbEPFL7, epidermal patterning factor/EPF-like, EPFL6, Sb09g023370
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt A0A1B6P9T4
Pfam -
Panther DB PTHR33109 PTHR33109:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G30370 : allergen-related
RAP-DB (Rice) LOC_Os05g39880.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK10374
Barley -
Wheat TraesCS3D02G339700 , TraesCS3B02G377700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
2 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
3 Sobic.009G172700 expressed protein -
4 Sobic.010G231600 cytochrome P450, putative, expressed -
5 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
6 Sobic.003G302000 expressed protein -
7 Sobic.006G014400 pectate lyase precursor, putative, expressed K01728: pectate lyase
8 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
9 Sobic.001G518000 protein kinase, putative, expressed -
10 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
11 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
12 Sobic.003G152300 expressed protein -
13 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.001G441700 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
15 Sobic.003G307200 expressed protein -
16 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
17 Sobic.001G201000 protein transport protein-related, putative, expressed -
18 Sobic.010G247000 expressed protein -
19 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
20 Sobic.007G163400 protein Kinase-like protein TMKL1 precursor, putative, expressed -


Gene co-expression network
sample Sobic009G173200 Sobic009G173200 Sobic003G045700 Sobic003G045700 Sobic009G173200--Sobic003G045700 Sobic001G207600 Sobic001G207600 Sobic009G173200--Sobic001G207600 Sobic009G172700 Sobic009G172700 Sobic009G173200--Sobic009G172700 Sobic010G231600 Sobic010G231600 Sobic009G173200--Sobic010G231600 Sobic001G379900 Sobic001G379900 Sobic009G173200--Sobic001G379900 Sobic003G302000 Sobic003G302000 Sobic009G173200--Sobic003G302000 Sobic006G014400 Sobic006G014400 Sobic009G173200--Sobic006G014400 Sobic007G165800 Sobic007G165800 Sobic009G173200--Sobic007G165800 Sobic001G518000 Sobic001G518000 Sobic009G173200--Sobic001G518000 Sobic003G045700--Sobic010G231600 Sobic003G045700--Sobic001G207600 Sobic004G283800 Sobic004G283800 Sobic003G045700--Sobic004G283800 Sobic005G156100 Sobic005G156100 Sobic003G045700--Sobic005G156100 Sobic009G031400 Sobic009G031400 Sobic003G045700--Sobic009G031400 Sobic001G441700 Sobic001G441700 Sobic003G045700--Sobic001G441700 Sobic006G125800 Sobic006G125800 Sobic003G045700--Sobic006G125800 Sobic001G023500 Sobic001G023500 Sobic003G045700--Sobic001G023500 Sobic003G045700--Sobic009G173200 Sobic001G207600--Sobic003G045700 Sobic001G207600--Sobic004G283800 Sobic004G274600 Sobic004G274600 Sobic001G207600--Sobic004G274600 Sobic009G174100 Sobic009G174100 Sobic001G207600--Sobic009G174100 Sobic001G207600--Sobic010G231600 Sobic010G020600 Sobic010G020600 Sobic001G207600--Sobic010G020600 Sobic001G207600--Sobic005G156100 Sobic008G097700 Sobic008G097700 Sobic001G207600--Sobic008G097700 Sobic003G339600 Sobic003G339600 Sobic001G207600--Sobic003G339600 Sobic002G419200 Sobic002G419200 Sobic009G172700--Sobic002G419200 Sobic007G180200 Sobic007G180200 Sobic009G172700--Sobic007G180200 Sobic003G360700 Sobic003G360700 Sobic009G172700--Sobic003G360700 Sobic009G172700--Sobic007G165800 Sobic007G163400 Sobic007G163400 Sobic009G172700--Sobic007G163400 Sobic001G488900 Sobic001G488900 Sobic009G172700--Sobic001G488900 Sobic009G172700--Sobic008G097700 Sobic001G285200 Sobic001G285200 Sobic009G172700--Sobic001G285200 Sobic010G010900 Sobic010G010900 Sobic009G172700--Sobic010G010900 Sobic010G231600--Sobic003G045700 Sobic010G231600--Sobic001G207600 Sobic010G231600--Sobic006G014400 Sobic010G231600--Sobic001G023500 Sobic010G231600--Sobic004G283800 Sobic010G231600--Sobic001G441700 Sobic010G231600--Sobic009G031400 Sobic010G231600--Sobic009G173200 Sobic001G266200 Sobic001G266200 Sobic010G231600--Sobic001G266200 Sobic004G003700 Sobic004G003700 Sobic001G379900--Sobic004G003700 Sobic010G077000 Sobic010G077000 Sobic001G379900--Sobic010G077000 Sobic010G276600 Sobic010G276600 Sobic001G379900--Sobic010G276600 Sobic006G221800 Sobic006G221800 Sobic001G379900--Sobic006G221800 Sobic001G493900 Sobic001G493900 Sobic001G379900--Sobic001G493900 Sobic006G163300 Sobic006G163300 Sobic001G379900--Sobic006G163300 Sobic001G143400 Sobic001G143400 Sobic001G379900--Sobic001G143400 Sobic003G010700 Sobic003G010700 Sobic001G379900--Sobic003G010700 Sobic003G307200 Sobic003G307200 Sobic001G379900--Sobic003G307200 Sobic003G302000--Sobic007G165800 Sobic003G302000--Sobic004G274600 Sobic003G302000--Sobic007G163400 Sobic007G170100 Sobic007G170100 Sobic003G302000--Sobic007G170100 Sobic003G302000--Sobic007G180200 Sobic003G356600 Sobic003G356600 Sobic003G302000--Sobic003G356600 Sobic005G199700 Sobic005G199700 Sobic003G302000--Sobic005G199700 Sobic003G302000--Sobic008G097700 Sobic001G286700 Sobic001G286700 Sobic003G302000--Sobic001G286700 Sobic010G247000 Sobic010G247000 Sobic006G014400--Sobic010G247000 Sobic007G087800 Sobic007G087800 Sobic006G014400--Sobic007G087800 Sobic002G430700 Sobic002G430700 Sobic006G014400--Sobic002G430700 Sobic006G014400--Sobic010G231600 Sobic007G116800 Sobic007G116800 Sobic006G014400--Sobic007G116800 Sobic006G014400--Sobic006G163300 Sobic006G014400--Sobic010G077000 Sobic010G092400 Sobic010G092400 Sobic006G014400--Sobic010G092400 Sobic006G270500 Sobic006G270500 Sobic006G014400--Sobic006G270500 Sobic007G165800--Sobic004G274600 Sobic001G434100 Sobic001G434100 Sobic007G165800--Sobic001G434100 Sobic007G165800--Sobic007G180200 Sobic007G165800--Sobic001G286700 Sobic003G027100 Sobic003G027100 Sobic007G165800--Sobic003G027100 Sobic010G235300 Sobic010G235300 Sobic007G165800--Sobic010G235300 Sobic001G199400 Sobic001G199400 Sobic007G165800--Sobic001G199400 Sobic007G165800--Sobic007G170100 Sobic003G338700 Sobic003G338700 Sobic007G165800--Sobic003G338700 Sobic002G360500 Sobic002G360500 Sobic001G518000--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic001G518000--Sobic002G417000 Sobic001G518000--Sobic003G307200 Sobic010G014500 Sobic010G014500 Sobic001G518000--Sobic010G014500 Sobic001G518000--Sobic007G165800 Sobic010G211800 Sobic010G211800 Sobic001G518000--Sobic010G211800 Sobic001G518000--Sobic001G493900 Sobic008G038200 Sobic008G038200 Sobic001G518000--Sobic008G038200 Sobic001G518000--Sobic004G003700
Octagon: transcription factors


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