Gene annotation
Transcriptome id Sobic.003G152300.1
Synonym Sb03g013230
Functional annotation expressed protein
UniProt C5XIY3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g22380.1 : expressed protein
MaizeGDB (Corn) Zm00025a024386
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G170100 male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.005G009600 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.008G008100 kelch repeat-containing protein, putative, expressed -
4 Sobic.009G023900 homeobox domain containing protein, expressed -
5 Sobic.006G273600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G010700 plant-specific domain TIGR01568 family protein, expressed -
7 Sobic.006G005900 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
8 Sobic.004G274600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
9 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
10 Sobic.010G235300 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
11 Sobic.010G166300 expressed protein -
12 Sobic.002G363300 - -
13 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
14 Sobic.009G173200 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
15 Sobic.010G077000 "Upregulated in leave and stem in response to drouht stress, not expredded in roots"(PubMedID : 31615416)@receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.008G097700 transmembrane amino acid transporter protein, putative, expressed -
17 Sobic.003G302000 expressed protein -
18 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
19 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
20 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -


Gene co-expression network
sample Sobic003G152300 Sobic003G152300 Sobic007G170100 Sobic007G170100 Sobic003G152300--Sobic007G170100 Sobic005G009600 Sobic005G009600 Sobic003G152300--Sobic005G009600 Sobic008G008100 Sobic008G008100 Sobic003G152300--Sobic008G008100 Sobic009G023900 Sobic009G023900 Sobic003G152300--Sobic009G023900 Sobic006G273600 Sobic006G273600 Sobic003G152300--Sobic006G273600 Sobic003G010700 Sobic003G010700 Sobic003G152300--Sobic003G010700 Sobic006G005900 Sobic006G005900 Sobic003G152300--Sobic006G005900 Sobic004G274600 Sobic004G274600 Sobic003G152300--Sobic004G274600 Sobic001G286700 Sobic001G286700 Sobic003G152300--Sobic001G286700 Sobic007G170100--Sobic006G273600 Sobic007G170100--Sobic005G009600 Sobic010G235300 Sobic010G235300 Sobic007G170100--Sobic010G235300 Sobic007G170100--Sobic003G010700 Sobic002G363300 Sobic002G363300 Sobic007G170100--Sobic002G363300 Sobic007G170100--Sobic001G286700 Sobic007G165800 Sobic007G165800 Sobic007G170100--Sobic007G165800 Sobic005G199700 Sobic005G199700 Sobic007G170100--Sobic005G199700 Sobic003G027100 Sobic003G027100 Sobic007G170100--Sobic003G027100 Sobic005G009600--Sobic006G273600 Sobic010G166300 Sobic010G166300 Sobic005G009600--Sobic010G166300 Sobic005G009600--Sobic007G170100 Sobic005G009600--Sobic009G023900 Sobic005G009600--Sobic010G235300 Sobic005G009600--Sobic002G363300 Sobic005G009600--Sobic001G286700 Sobic005G009600--Sobic003G027100 Sobic003G178500 Sobic003G178500 Sobic005G009600--Sobic003G178500 Sobic008G008100--Sobic004G274600 Sobic008G008100--Sobic002G363300 Sobic004G211700 Sobic004G211700 Sobic008G008100--Sobic004G211700 Sobic008G008100--Sobic003G010700 Sobic008G008100--Sobic001G286700 Sobic008G008100--Sobic009G023900 Sobic003G356600 Sobic003G356600 Sobic008G008100--Sobic003G356600 Sobic008G008100--Sobic005G009600 Sobic002G312200 Sobic002G312200 Sobic008G008100--Sobic002G312200 Sobic009G023900--Sobic010G166300 Sobic009G023900--Sobic003G178500 Sobic009G023900--Sobic005G009600 Sobic005G218000 Sobic005G218000 Sobic009G023900--Sobic005G218000 Sobic009G023900--Sobic004G211700 Sobic007G076100 Sobic007G076100 Sobic009G023900--Sobic007G076100 Sobic001G341700 Sobic001G341700 Sobic009G023900--Sobic001G341700 Sobic009G023900--Sobic002G312200 Sobic009G023900--Sobic006G005900 Sobic006G273600--Sobic007G170100 Sobic006G273600--Sobic005G009600 Sobic006G273600--Sobic002G363300 Sobic006G273600--Sobic003G010700 Sobic006G273600--Sobic010G235300 Sobic006G273600--Sobic001G286700 Sobic006G273600--Sobic005G199700 Sobic006G273600--Sobic003G027100 Sobic006G273600--Sobic010G166300 Sobic003G010700--Sobic002G363300 Sobic003G010700--Sobic006G273600 Sobic003G010700--Sobic007G170100 Sobic006G163300 Sobic006G163300 Sobic003G010700--Sobic006G163300 Sobic003G010700--Sobic005G199700 Sobic002G360600 Sobic002G360600 Sobic003G010700--Sobic002G360600 Sobic009G146700 Sobic009G146700 Sobic003G010700--Sobic009G146700 Sobic003G338700 Sobic003G338700 Sobic003G010700--Sobic003G338700 Sobic010G276600 Sobic010G276600 Sobic003G010700--Sobic010G276600 Sobic006G005800 Sobic006G005800 Sobic006G005900--Sobic006G005800 Sobic006G005900--Sobic009G023900 Sobic003G090650 Sobic003G090650 Sobic006G005900--Sobic003G090650 Sobic005G110900 Sobic005G110900 Sobic006G005900--Sobic005G110900 Sobic002G353100 Sobic002G353100 Sobic006G005900--Sobic002G353100 Sobic004G324500 Sobic004G324500 Sobic006G005900--Sobic004G324500 Sobic001G447800 Sobic001G447800 Sobic006G005900--Sobic001G447800 Sobic003G382400 Sobic003G382400 Sobic006G005900--Sobic003G382400 Sobic006G005900--Sobic005G218000 Sobic004G274600--Sobic007G165800 Sobic004G274600--Sobic004G211700 Sobic001G434100 Sobic001G434100 Sobic004G274600--Sobic001G434100 Sobic004G274600--Sobic001G286700 Sobic001G207600 Sobic001G207600 Sobic004G274600--Sobic001G207600 Sobic008G097700 Sobic008G097700 Sobic004G274600--Sobic008G097700 Sobic004G274600--Sobic008G008100 Sobic004G274600--Sobic003G027100 Sobic003G298700 Sobic003G298700 Sobic004G274600--Sobic003G298700 Sobic001G286700--Sobic010G235300 Sobic001G286700--Sobic003G027100 Sobic001G286700--Sobic002G363300 Sobic001G286700--Sobic004G211700 Sobic001G286700--Sobic006G273600 Sobic001G473500 Sobic001G473500 Sobic001G286700--Sobic001G473500 Sobic001G286700--Sobic003G338700 Sobic001G286700--Sobic005G199700 Sobic001G286700--Sobic007G165800
Octagon: transcription factors


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