Gene annotation
Transcriptome id Sobic.003G401800.1
Synonym Sb03g043790
Functional annotation expressed protein
UniProt C5XG81
Pfam -
Panther DB PTHR35729 PTHR35729:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07210 : -
RAP-DB (Rice) LOC_Os01g68830.1 : expressed protein
MaizeGDB (Corn) Zm00025a026250 , Zm00025a026293
Brachypodium KQK11204
Barley HORVU3Hr1G093500.1 , HORVU3Hr1G093500.2 , HORVU3Hr1G093500.3 , HORVU3Hr1G093500.4
Wheat TraesCS3A02G423000 , TraesCS3D02G418200 , TraesCS3B02G458600
Populus -


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cDNA sequences
Sobic.003G401800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G000700 choline transporter-related, putative, expressed K15377: solute carrier family 44 (choline transporter-like protein), member 2/4/5
2 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
3 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
4 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
5 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
6 Sobic.009G128800 expressed protein -
7 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
8 Sobic.001G425700 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
9 Sobic.010G165900 - -
10 Sobic.005G098900 - -
11 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
12 Sobic.002G362700 zinc finger family protein, putative, expressed -
13 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
14 Sobic.005G143100 expressed protein -
15 Sobic.004G253500 auxin-independent growth promoter protein, putative, expressed -
16 Sobic.003G031700 protein kinase family protein, putative, expressed -
17 Sobic.004G164700 expressed protein -
18 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
19 Sobic.002G383100 expressed protein -
20 Sobic.001G051300 BEE 1, putative, expressed -


Gene co-expression network
sample Sobic003G401800 Sobic003G401800 Sobic007G000700 Sobic007G000700 Sobic003G401800--Sobic007G000700 Sobic003G226700 Sobic003G226700 Sobic003G401800--Sobic003G226700 Sobic003G078300 Sobic003G078300 Sobic003G401800--Sobic003G078300 Sobic010G211800 Sobic010G211800 Sobic003G401800--Sobic010G211800 Sobic002G320600 Sobic002G320600 Sobic003G401800--Sobic002G320600 Sobic009G128800 Sobic009G128800 Sobic003G401800--Sobic009G128800 Sobic001G437500 Sobic001G437500 Sobic003G401800--Sobic001G437500 Sobic001G425700 Sobic001G425700 Sobic003G401800--Sobic001G425700 Sobic010G165900 Sobic010G165900 Sobic003G401800--Sobic010G165900 Sobic007G000700--Sobic003G401800 Sobic006G081000 Sobic006G081000 Sobic007G000700--Sobic006G081000 Sobic007G000700--Sobic003G226700 Sobic007G000700--Sobic002G320600 Sobic010G092400 Sobic010G092400 Sobic007G000700--Sobic010G092400 Sobic010G078300 Sobic010G078300 Sobic007G000700--Sobic010G078300 Sobic007G000700--Sobic003G078300 Sobic005G062600 Sobic005G062600 Sobic007G000700--Sobic005G062600 Sobic003G289800 Sobic003G289800 Sobic007G000700--Sobic003G289800 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G420300 Sobic003G420300 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic003G226700--Sobic001G425700 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic002G311000 Sobic002G311000 Sobic003G078300--Sobic002G311000 Sobic004G253500 Sobic004G253500 Sobic003G078300--Sobic004G253500 Sobic001G461800 Sobic001G461800 Sobic003G078300--Sobic001G461800 Sobic001G389600 Sobic001G389600 Sobic003G078300--Sobic001G389600 Sobic006G257200 Sobic006G257200 Sobic003G078300--Sobic006G257200 Sobic003G291000 Sobic003G291000 Sobic003G078300--Sobic003G291000 Sobic002G045200 Sobic002G045200 Sobic003G078300--Sobic002G045200 Sobic003G250000 Sobic003G250000 Sobic003G078300--Sobic003G250000 Sobic002G362700 Sobic002G362700 Sobic003G078300--Sobic002G362700 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic002G320600--Sobic003G031700 Sobic001G201000 Sobic001G201000 Sobic002G320600--Sobic001G201000 Sobic002G320600--Sobic003G420300 Sobic002G320600--Sobic003G292700 Sobic002G320600--Sobic010G211800 Sobic002G320600--Sobic002G362700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic004G328300 Sobic004G328300 Sobic002G320600--Sobic004G328300 Sobic001G518000 Sobic001G518000 Sobic009G128800--Sobic001G518000 Sobic001G522300 Sobic001G522300 Sobic009G128800--Sobic001G522300 Sobic009G216300 Sobic009G216300 Sobic009G128800--Sobic009G216300 Sobic001G093000 Sobic001G093000 Sobic009G128800--Sobic001G093000 Sobic009G235700 Sobic009G235700 Sobic009G128800--Sobic009G235700 Sobic009G128800--Sobic010G211800 Sobic001G286400 Sobic001G286400 Sobic009G128800--Sobic001G286400 Sobic009G128800--Sobic002G360500 Sobic003G360700 Sobic003G360700 Sobic009G128800--Sobic003G360700 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic003G259300 Sobic003G259300 Sobic001G425700--Sobic003G259300 Sobic001G425700--Sobic003G226700 Sobic002G006100 Sobic002G006100 Sobic001G425700--Sobic002G006100 Sobic001G425700--Sobic003G024000 Sobic003G104100 Sobic003G104100 Sobic001G425700--Sobic003G104100 Sobic004G164700 Sobic004G164700 Sobic001G425700--Sobic004G164700 Sobic009G225500 Sobic009G225500 Sobic001G425700--Sobic009G225500 Sobic006G281900 Sobic006G281900 Sobic001G425700--Sobic006G281900 Sobic009G127800 Sobic009G127800 Sobic001G425700--Sobic009G127800 Sobic010G165700 Sobic010G165700 Sobic010G165900--Sobic010G165700 Sobic002G101100 Sobic002G101100 Sobic010G165900--Sobic002G101100 Sobic005G098900 Sobic005G098900 Sobic010G165900--Sobic005G098900 Sobic010G248500 Sobic010G248500 Sobic010G165900--Sobic010G248500 Sobic001G318100 Sobic001G318100 Sobic010G165900--Sobic001G318100 Sobic010G165900--Sobic003G401800 Sobic010G165800 Sobic010G165800 Sobic010G165900--Sobic010G165800 Sobic008G090100 Sobic008G090100 Sobic010G165900--Sobic008G090100 Sobic010G165900--Sobic008G127550
Octagon: transcription factors


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