Gene annotation
Transcriptome id Sobic.009G111500.1,Sobic.009G111500.2
Synonym Sb09g017980
Functional annotation expressed protein
UniProt A0A1Z5R240 , C5YWU2
Pfam PF04398
Panther DB PTHR31676 PTHR31676:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02816 : Protein of unknown function, DUF538
RAP-DB (Rice) LOC_Os05g29900.1 : expressed protein
MaizeGDB (Corn) Zm00025a045585 , Zm00025a057928 , Zm00025a036966 , Zm00025a042122 , Zm00025a043367
Brachypodium -
Barley HORVU1Hr1G058860.1 , HORVU1Hr1G058860.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G048600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.010G169200 homeobox domain containing protein, expressed -
3 Sobic.005G070700 - -
4 Sobic.001G459300 - -
5 Sobic.004G277700 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
6 Sobic.001G456000 YABBY domain containing protein, putative, expressed -
7 Sobic.001G274300 GASR1 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, putative -
8 Sobic.001G106500 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
9 Sobic.007G218400 - -
10 Sobic.003G238800 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.001G459400 B3 DNA binding domain containing protein, expressed -
12 Sobic.009G059800 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
13 Sobic.002G344201 - -
14 Sobic.001G077800 MYB family transcription factor, putative, expressed -
15 Sobic.002G078900 agenet domain containing protein, expressed -
16 Sobic.007G137101 R2R3 MYB transcription factor(PubMedID : 33633216) K09422: transcription factor MYB, plant
17 Sobic.002G343600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 23108465)@polygalacturonase inhibitor 1 precursor, putative, expressed -
18 Sobic.009G059932 - -
19 Sobic.010G237400 ZmEBE-1 protein, putative, expressed -
20 Sobic.003G404800 OsFBO21 - F-box and other domain containing protein, expressed -


Gene co-expression network
sample Sobic009G111500 Sobic009G111500 Sobic010G048600 Sobic010G048600 Sobic009G111500--Sobic010G048600 Sobic010G169200 Sobic010G169200 Sobic009G111500--Sobic010G169200 Sobic005G070700 Sobic005G070700 Sobic009G111500--Sobic005G070700 Sobic001G459300 Sobic001G459300 Sobic009G111500--Sobic001G459300 Sobic004G277700 Sobic004G277700 Sobic009G111500--Sobic004G277700 Sobic001G456000 Sobic001G456000 Sobic009G111500--Sobic001G456000 Sobic001G274300 Sobic001G274300 Sobic009G111500--Sobic001G274300 Sobic001G106500 Sobic001G106500 Sobic009G111500--Sobic001G106500 Sobic007G218400 Sobic007G218400 Sobic009G111500--Sobic007G218400 Sobic010G048600--Sobic001G459300 Sobic010G048600--Sobic005G070700 Sobic001G459400 Sobic001G459400 Sobic010G048600--Sobic001G459400 Sobic010G048600--Sobic001G106500 Sobic010G048600--Sobic001G274300 Sobic010G048600--Sobic001G456000 Sobic003G092300 Sobic003G092300 Sobic010G048600--Sobic003G092300 Sobic002G078900 Sobic002G078900 Sobic010G048600--Sobic002G078900 Sobic010G183800 Sobic010G183800 Sobic010G048600--Sobic010G183800 Sobic010G169200--Sobic007G218400 Sobic010G220800 Sobic010G220800 Sobic010G169200--Sobic010G220800 Sobic009G059800 Sobic009G059800 Sobic010G169200--Sobic009G059800 Sobic004G254300 Sobic004G254300 Sobic010G169200--Sobic004G254300 Sobic009G059932 Sobic009G059932 Sobic010G169200--Sobic009G059932 Sobic010G237400 Sobic010G237400 Sobic010G169200--Sobic010G237400 Sobic009G059866 Sobic009G059866 Sobic010G169200--Sobic009G059866 Sobic002G102800 Sobic002G102800 Sobic010G169200--Sobic002G102800 Sobic004G056500 Sobic004G056500 Sobic010G169200--Sobic004G056500 Sobic005G070700--Sobic001G459300 Sobic005G070700--Sobic010G048600 Sobic005G070700--Sobic001G459400 Sobic005G070700--Sobic001G274300 Sobic005G070700--Sobic001G106500 Sobic005G070700--Sobic003G092300 Sobic005G070700--Sobic001G456000 Sobic005G070101 Sobic005G070101 Sobic005G070700--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic005G070700--Sobic004G168000 Sobic001G459300--Sobic005G070700 Sobic001G459300--Sobic010G048600 Sobic001G459300--Sobic001G459400 Sobic001G459300--Sobic001G106500 Sobic001G459300--Sobic001G274300 Sobic001G459300--Sobic001G456000 Sobic001G459300--Sobic003G092300 Sobic001G459300--Sobic002G078900 Sobic001G459300--Sobic010G183800 Sobic004G277700--Sobic009G059800 Sobic004G086500 Sobic004G086500 Sobic004G277700--Sobic004G086500 Sobic002G344201 Sobic002G344201 Sobic004G277700--Sobic002G344201 Sobic004G277700--Sobic009G059932 Sobic004G277700--Sobic007G218400 Sobic004G277700--Sobic010G237400 Sobic004G277700--Sobic001G456000 Sobic004G277700--Sobic004G254300 Sobic004G277700--Sobic004G056500 Sobic001G456000--Sobic002G078900 Sobic001G456000--Sobic010G183800 Sobic001G456000--Sobic001G459300 Sobic001G456000--Sobic010G048600 Sobic001G456000--Sobic001G459400 Sobic001G456000--Sobic001G106500 Sobic001G456000--Sobic005G070700 Sobic003G243100 Sobic003G243100 Sobic001G456000--Sobic003G243100 Sobic001G456000--Sobic004G277700 Sobic001G274300--Sobic005G070700 Sobic001G274300--Sobic001G459300 Sobic001G274300--Sobic010G048600 Sobic001G274300--Sobic001G459400 Sobic001G274300--Sobic001G106500 Sobic006G015100 Sobic006G015100 Sobic001G274300--Sobic006G015100 Sobic001G274300--Sobic001G456000 Sobic001G274300--Sobic003G092300 Sobic001G274300--Sobic002G078900 Sobic001G106500--Sobic001G459300 Sobic001G106500--Sobic010G048600 Sobic001G106500--Sobic003G092300 Sobic001G106500--Sobic001G456000 Sobic001G106500--Sobic005G070700 Sobic003G046400 Sobic003G046400 Sobic001G106500--Sobic003G046400 Sobic001G106500--Sobic002G078900 Sobic001G106500--Sobic001G459400 Sobic001G106500--Sobic010G183800 Sobic007G218400--Sobic009G059932 Sobic007G218400--Sobic009G059866 Sobic007G218400--Sobic009G059800 Sobic007G218400--Sobic002G102800 Sobic007G218400--Sobic004G056500 Sobic007G218400--Sobic010G237400 Sobic010G144600 Sobic010G144600 Sobic007G218400--Sobic010G144600 Sobic003G369800 Sobic003G369800 Sobic007G218400--Sobic003G369800 Sobic007G218400--Sobic004G254300
Octagon: transcription factors


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