Gene annotation
Transcriptome id Sobic.001G077800.1
Synonym Sb01g007030, ATS, KAN4
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5WZ98
Pfam PF00249
Panther DB PTHR31496 PTHR31496:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42630 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g55760.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a055113 , Zm00025a008312 , Zm00025a021477 , Zm00025a016708
Brachypodium PNT69214 , KQK13023 , KQJ90138
Barley HORVU6Hr1G000410.16 , HORVU0Hr1G016420.1 , HORVU6Hr1G000410.8 , HORVU6Hr1G000410.6 , HORVU6Hr1G000410.5 , HORVU6Hr1G000410.3 , HORVU6Hr1G000410.2 , HORVU6Hr1G000410.1 , HORVU6Hr1G064920.1 , HORVU5Hr1G097900.4 , HORVU5Hr1G097900.2 , HORVU5Hr1G097900.3 , HORVU5Hr1G097900.1 , HORVU6Hr1G000410.12 , HORVU6Hr1G000410.10
Wheat TraesCS6B02G012800 , TraesCS5A02G402800 , TraesCS6D02G011600 , TraesCS5B02G407600 , TraesCS6A02G007300 , TraesCS5D02G412800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G383700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
2 Sobic.009G111500 expressed protein -
3 Sobic.003G308100 CSLC1 - cellulose synthase-like family C, expressed -
4 Sobic.001G043500 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A
5 Sobic.003G295100 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.003G365800 expressed protein -
7 Sobic.005G070101 - -
8 Sobic.004G168000 pectinesterase inhibitor domain containing protein, putative, expressed -
9 Sobic.002G159000 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
10 Sobic.002G425200 expressed protein -
11 Sobic.001G113900 PHD-finger domain containing protein, putative, expressed -
12 Sobic.003G008800 expressed protein -
13 Sobic.002G239101 - -
14 Sobic.001G146600 - -
15 Sobic.005G070700 - -
16 Sobic.004G327600 expressed protein -
17 Sobic.001G459300 - -
18 Sobic.009G179000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
19 Sobic.002G203500 protein binding protein, putative, expressed -
20 Sobic.007G121700 YDG/SRA domain containing protein, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT


Gene co-expression network
sample Sobic001G077800 Sobic001G077800 Sobic003G383700 Sobic003G383700 Sobic001G077800--Sobic003G383700 Sobic009G111500 Sobic009G111500 Sobic001G077800--Sobic009G111500 Sobic003G308100 Sobic003G308100 Sobic001G077800--Sobic003G308100 Sobic001G043500 Sobic001G043500 Sobic001G077800--Sobic001G043500 Sobic003G295100 Sobic003G295100 Sobic001G077800--Sobic003G295100 Sobic003G365800 Sobic003G365800 Sobic001G077800--Sobic003G365800 Sobic005G070101 Sobic005G070101 Sobic001G077800--Sobic005G070101 Sobic004G168000 Sobic004G168000 Sobic001G077800--Sobic004G168000 Sobic002G159000 Sobic002G159000 Sobic001G077800--Sobic002G159000 Sobic001G271600 Sobic001G271600 Sobic003G383700--Sobic001G271600 Sobic003G383700--Sobic003G295100 Sobic003G383700--Sobic003G308100 Sobic003G383700--Sobic003G365800 Sobic004G229700 Sobic004G229700 Sobic003G383700--Sobic004G229700 Sobic003G374100 Sobic003G374100 Sobic003G383700--Sobic003G374100 Sobic004G101200 Sobic004G101200 Sobic003G383700--Sobic004G101200 Sobic003G090600 Sobic003G090600 Sobic003G383700--Sobic003G090600 Sobic007G128100 Sobic007G128100 Sobic003G383700--Sobic007G128100 Sobic010G048600 Sobic010G048600 Sobic009G111500--Sobic010G048600 Sobic010G169200 Sobic010G169200 Sobic009G111500--Sobic010G169200 Sobic005G070700 Sobic005G070700 Sobic009G111500--Sobic005G070700 Sobic001G459300 Sobic001G459300 Sobic009G111500--Sobic001G459300 Sobic004G277700 Sobic004G277700 Sobic009G111500--Sobic004G277700 Sobic001G456000 Sobic001G456000 Sobic009G111500--Sobic001G456000 Sobic001G274300 Sobic001G274300 Sobic009G111500--Sobic001G274300 Sobic001G106500 Sobic001G106500 Sobic009G111500--Sobic001G106500 Sobic007G218400 Sobic007G218400 Sobic009G111500--Sobic007G218400 Sobic010G156100 Sobic010G156100 Sobic003G308100--Sobic010G156100 Sobic003G308100--Sobic003G365800 Sobic003G142100 Sobic003G142100 Sobic003G308100--Sobic003G142100 Sobic003G283400 Sobic003G283400 Sobic003G308100--Sobic003G283400 Sobic006G111100 Sobic006G111100 Sobic003G308100--Sobic006G111100 Sobic003G308100--Sobic004G101200 Sobic003G308100--Sobic003G383700 Sobic003G308100--Sobic001G271600 Sobic001G495500 Sobic001G495500 Sobic003G308100--Sobic001G495500 Sobic007G161600 Sobic007G161600 Sobic001G043500--Sobic007G161600 Sobic005G162900 Sobic005G162900 Sobic001G043500--Sobic005G162900 Sobic002G078900 Sobic002G078900 Sobic001G043500--Sobic002G078900 Sobic002G205000 Sobic002G205000 Sobic001G043500--Sobic002G205000 Sobic007G121700 Sobic007G121700 Sobic001G043500--Sobic007G121700 Sobic007G033700 Sobic007G033700 Sobic001G043500--Sobic007G033700 Sobic001G463301 Sobic001G463301 Sobic001G043500--Sobic001G463301 Sobic003G091200 Sobic003G091200 Sobic001G043500--Sobic003G091200 Sobic002G178700 Sobic002G178700 Sobic001G043500--Sobic002G178700 Sobic002G239101 Sobic002G239101 Sobic003G295100--Sobic002G239101 Sobic003G295100--Sobic002G159000 Sobic003G295100--Sobic004G168000 Sobic003G295100--Sobic005G070101 Sobic001G235200 Sobic001G235200 Sobic003G295100--Sobic001G235200 Sobic006G213900 Sobic006G213900 Sobic003G295100--Sobic006G213900 Sobic006G134700 Sobic006G134700 Sobic003G295100--Sobic006G134700 Sobic003G295100--Sobic003G374100 Sobic003G295100--Sobic001G463301 Sobic003G365800--Sobic003G308100 Sobic003G365800--Sobic001G271600 Sobic003G365800--Sobic003G283400 Sobic003G365800--Sobic003G142100 Sobic003G365800--Sobic010G156100 Sobic009G169800 Sobic009G169800 Sobic003G365800--Sobic009G169800 Sobic003G365800--Sobic003G295100 Sobic005G020100 Sobic005G020100 Sobic003G365800--Sobic005G020100 Sobic009G151100 Sobic009G151100 Sobic003G365800--Sobic009G151100 Sobic005G070101--Sobic004G168000 Sobic005G070101--Sobic002G159000 Sobic005G070101--Sobic002G239101 Sobic005G070101--Sobic006G134700 Sobic005G070101--Sobic006G213900 Sobic005G070101--Sobic001G235200 Sobic009G179000 Sobic009G179000 Sobic005G070101--Sobic009G179000 Sobic001G459400 Sobic001G459400 Sobic005G070101--Sobic001G459400 Sobic005G070101--Sobic005G070700 Sobic004G168000--Sobic004G168000 Sobic004G168000--Sobic002G159000 Sobic004G168000--Sobic002G239101 Sobic004G168000--Sobic006G134700 Sobic004G168000--Sobic006G213900 Sobic004G168000--Sobic001G235200 Sobic004G168000--Sobic009G179000 Sobic004G168000--Sobic001G459400 Sobic004G168000--Sobic005G070700 Sobic002G159000--Sobic004G168000 Sobic002G159000--Sobic005G070101 Sobic002G159000--Sobic002G239101 Sobic002G159000--Sobic006G134700 Sobic002G159000--Sobic006G213900 Sobic002G159000--Sobic001G235200 Sobic002G159000--Sobic009G179000 Sobic002G159000--Sobic001G459400 Sobic002G159000--Sobic005G070700
Octagon: transcription factors


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