Gene annotation
Transcriptome id Sobic.002G208200.1
Synonym CSLC05, ATCSLC5, ATCSLC05, CSLC5
Functional annotation CSLC2 - cellulose synthase-like family C, expressed
UniProt A0A1B6QCL1
Pfam PF13632
Panther DB PTHR32044 PTHR32044:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G31590 : Cellulose-synthase-like C5
RAP-DB (Rice) LOC_Os09g25900.1 : CSLC2 - cellulose synthase-like family C, expressed
MaizeGDB (Corn) Zm00025a047081
Brachypodium -
Barley HORVU3Hr1G074570.2 , HORVU3Hr1G074570.3 , HORVU3Hr1G074570.1 , HORVU3Hr1G074570.6 , HORVU3Hr1G074570.7 , HORVU3Hr1G074570.4 , HORVU3Hr1G074570.5 , HORVU3Hr1G074570.8 , HORVU3Hr1G074570.9 , HORVU3Hr1G074570.10 , HORVU3Hr1G074570.11 , HORVU3Hr1G074570.12 , HORVU3Hr1G074570.13
Wheat TraesCSU02G038900 , TraesCS3A02G299500 , TraesCS3B02G000600 , TraesCS3D02G010500 , TraesCS3B02G337100 , TraesCS3D02G302300 , TraesCS1D02G334400
Populus -


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cDNA sequences
Sobic.002G208200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G159800 KIP1, putative, expressed -
2 Sobic.009G125900 expressed protein -
3 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
5 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
6 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
7 Sobic.003G053700 growth regulator related protein, putative, expressed -
8 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
9 Sobic.004G265600 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.002G065000 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
11 Sobic.009G026800 lectin protein kinase family protein, putative, expressed -
12 Sobic.002G313600 src homology-3 domain protein 3, putative, expressed -
13 Sobic.004G275400 RING-H2 finger protein ATL5G, putative, expressed -
14 Sobic.001G368100 expressed protein K18158: nuclear control of ATPase protein 2
15 Sobic.009G061000 DNA binding protein, putative, expressed -
16 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
17 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.010G171300 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
19 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
20 Sobic.002G161700 Myb-like DNA-binding domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G208200 Sobic002G208200 Sobic001G159800 Sobic001G159800 Sobic002G208200--Sobic001G159800 Sobic009G125900 Sobic009G125900 Sobic002G208200--Sobic009G125900 Sobic009G063400 Sobic009G063400 Sobic002G208200--Sobic009G063400 Sobic001G408800 Sobic001G408800 Sobic002G208200--Sobic001G408800 Sobic007G139500 Sobic007G139500 Sobic002G208200--Sobic007G139500 Sobic001G196000 Sobic001G196000 Sobic002G208200--Sobic001G196000 Sobic003G053700 Sobic003G053700 Sobic002G208200--Sobic003G053700 Sobic001G437500 Sobic001G437500 Sobic002G208200--Sobic001G437500 Sobic004G265600 Sobic004G265600 Sobic002G208200--Sobic004G265600 Sobic010G090500 Sobic010G090500 Sobic001G159800--Sobic010G090500 Sobic001G159800--Sobic001G437500 Sobic009G061000 Sobic009G061000 Sobic001G159800--Sobic009G061000 Sobic009G206500 Sobic009G206500 Sobic001G159800--Sobic009G206500 Sobic009G073400 Sobic009G073400 Sobic001G159800--Sobic009G073400 Sobic003G017500 Sobic003G017500 Sobic001G159800--Sobic003G017500 Sobic001G159800--Sobic001G196000 Sobic006G173200 Sobic006G173200 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic009G125900--Sobic009G063400 Sobic009G026101 Sobic009G026101 Sobic009G125900--Sobic009G026101 Sobic002G075500 Sobic002G075500 Sobic009G125900--Sobic002G075500 Sobic002G118700 Sobic002G118700 Sobic009G125900--Sobic002G118700 Sobic009G125900--Sobic010G090500 Sobic009G125900--Sobic004G265600 Sobic010G096100 Sobic010G096100 Sobic009G125900--Sobic010G096100 Sobic004G051300 Sobic004G051300 Sobic009G125900--Sobic004G051300 Sobic003G254700 Sobic003G254700 Sobic009G125900--Sobic003G254700 Sobic009G063400--Sobic009G125900 Sobic009G063400--Sobic002G075500 Sobic009G063400--Sobic009G026101 Sobic009G063400--Sobic002G118700 Sobic009G063400--Sobic010G096100 Sobic001G334900 Sobic001G334900 Sobic009G063400--Sobic001G334900 Sobic009G063400--Sobic010G090500 Sobic001G208600 Sobic001G208600 Sobic009G063400--Sobic001G208600 Sobic006G075000 Sobic006G075000 Sobic009G063400--Sobic006G075000 Sobic001G408800--Sobic004G265600 Sobic008G103800 Sobic008G103800 Sobic001G408800--Sobic008G103800 Sobic008G051100 Sobic008G051100 Sobic001G408800--Sobic008G051100 Sobic001G408800--Sobic009G125900 Sobic001G533100 Sobic001G533100 Sobic001G408800--Sobic001G533100 Sobic002G342500 Sobic002G342500 Sobic001G408800--Sobic002G342500 Sobic010G059200 Sobic010G059200 Sobic001G408800--Sobic010G059200 Sobic006G038200 Sobic006G038200 Sobic001G408800--Sobic006G038200 Sobic004G275400 Sobic004G275400 Sobic001G408800--Sobic004G275400 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic007G139500--Sobic009G206500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic004G243800 Sobic004G243800 Sobic001G196000--Sobic004G243800 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G196000--Sobic001G159800 Sobic003G053700--Sobic009G125900 Sobic003G053700--Sobic002G342500 Sobic009G246700 Sobic009G246700 Sobic003G053700--Sobic009G246700 Sobic001G222400 Sobic001G222400 Sobic003G053700--Sobic001G222400 Sobic003G348800 Sobic003G348800 Sobic003G053700--Sobic003G348800 Sobic003G053700--Sobic010G090500 Sobic003G053700--Sobic004G265600 Sobic003G053700--Sobic003G254700 Sobic001G281900 Sobic001G281900 Sobic003G053700--Sobic001G281900 Sobic001G437500--Sobic001G196000 Sobic001G437500--Sobic004G243800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic001G437500--Sobic007G139500 Sobic001G437500--Sobic001G159800 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic004G265600--Sobic009G125900 Sobic001G116000 Sobic001G116000 Sobic004G265600--Sobic001G116000 Sobic004G265600--Sobic009G063400 Sobic004G265600--Sobic009G026101 Sobic004G203900 Sobic004G203900 Sobic004G265600--Sobic004G203900 Sobic004G265600--Sobic002G075500 Sobic004G265600--Sobic003G254700 Sobic004G265600--Sobic010G090500 Sobic008G174900 Sobic008G174900 Sobic004G265600--Sobic008G174900
Octagon: transcription factors


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