Gene annotation
Transcriptome id Sobic.001G368100.1
Synonym DGS1, Sb01g035060
Functional annotation expressed protein
UniProt C5WZP8
Pfam PF08637
Panther DB PTHR28234 PTHR28234:SF1
NCBI CDD -
KEGG Orthology K18158; nuclear control of ATPase protein 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12290 : dgd1 suppressor 1
RAP-DB (Rice) LOC_Os03g26030.1 : expressed protein
MaizeGDB (Corn) Zm00025a002527
Brachypodium KQK21643 , PNT77409 , KQK21644 , KQK21645
Barley HORVU1Hr1G050340.5 , HORVU1Hr1G050340.4 , HORVU1Hr1G050340.7 , HORVU1Hr1G050340.6 , HORVU1Hr1G050340.1 , HORVU1Hr1G050340.3 , HORVU1Hr1G050340.2 , HORVU1Hr1G050340.9 , HORVU1Hr1G050340.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G071628 - -
2 Sobic.002G152900 OsTOP6B - Topoisomerase 6 subunit B, expressed -
3 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
4 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
5 Sobic.004G215700 RAN GTPase-activating protein 1, putative, expressed K14319: Ran GTPase-activating protein 1
6 Sobic.009G214100 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
7 Sobic.007G173000 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
8 Sobic.004G156200 POLE1 - Putative DNA polymerase epsilon catalytic subunit, expressed K02324: DNA polymerase epsilon subunit 1
9 Sobic.010G236600 oligopeptidase, putative, expressed K01410: mitochondrial intermediate peptidase
10 Sobic.007G114000 histone deacetylase, putative, expressed K06067: histone deacetylase 1/2
11 Sobic.002G145300 ZOS7-13 - C2H2 zinc finger protein, expressed K11436: type I protein arginine methyltransferase
12 Sobic.006G181800 gamma-tubulin complex component 6, putative, expressed K16573: TUBGCP6, gamma-tubulin complex component 6
13 Sobic.005G088900 AGAP007117-PA, putative, expressed -
14 Sobic.006G024700 pumilio-family RNA binding repeat containing protein, expressed -
15 Sobic.006G033101 - K14401: CPSF1, cleavage and polyadenylation specificity factor subunit 1
16 Sobic.001G051300 BEE 1, putative, expressed -
17 Sobic.004G082700 PPR repeat containing protein, expressed -
18 Sobic.003G144000 pentatricopeptide, putative, expressed -
19 Sobic.002G056400 - K10884: XRCC6, KU70, ATP-dependent DNA helicase 2 subunit 1
20 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5


Gene co-expression network
sample Sobic001G368100 Sobic001G368100 Sobic006G071628 Sobic006G071628 Sobic001G368100--Sobic006G071628 Sobic002G152900 Sobic002G152900 Sobic001G368100--Sobic002G152900 Sobic010G188000 Sobic010G188000 Sobic001G368100--Sobic010G188000 Sobic007G139500 Sobic007G139500 Sobic001G368100--Sobic007G139500 Sobic004G215700 Sobic004G215700 Sobic001G368100--Sobic004G215700 Sobic009G214100 Sobic009G214100 Sobic001G368100--Sobic009G214100 Sobic007G173000 Sobic007G173000 Sobic001G368100--Sobic007G173000 Sobic004G156200 Sobic004G156200 Sobic001G368100--Sobic004G156200 Sobic010G236600 Sobic010G236600 Sobic001G368100--Sobic010G236600 Sobic009G052100 Sobic009G052100 Sobic006G071628--Sobic009G052100 Sobic001G051300 Sobic001G051300 Sobic006G071628--Sobic001G051300 Sobic006G084300 Sobic006G084300 Sobic006G071628--Sobic006G084300 Sobic006G071628--Sobic007G173000 Sobic010G250800 Sobic010G250800 Sobic006G071628--Sobic010G250800 Sobic001G199500 Sobic001G199500 Sobic006G071628--Sobic001G199500 Sobic006G071628--Sobic004G156200 Sobic001G507200 Sobic001G507200 Sobic006G071628--Sobic001G507200 Sobic001G296800 Sobic001G296800 Sobic006G071628--Sobic001G296800 Sobic004G038100 Sobic004G038100 Sobic002G152900--Sobic004G038100 Sobic002G214700 Sobic002G214700 Sobic002G152900--Sobic002G214700 Sobic002G152900--Sobic010G250800 Sobic007G114000 Sobic007G114000 Sobic002G152900--Sobic007G114000 Sobic002G152900--Sobic001G368100 Sobic004G215900 Sobic004G215900 Sobic002G152900--Sobic004G215900 Sobic002G056400 Sobic002G056400 Sobic002G152900--Sobic002G056400 Sobic003G250900 Sobic003G250900 Sobic002G152900--Sobic003G250900 Sobic006G181800 Sobic006G181800 Sobic002G152900--Sobic006G181800 Sobic001G373000 Sobic001G373000 Sobic010G188000--Sobic001G373000 Sobic010G188000--Sobic004G038100 Sobic002G371600 Sobic002G371600 Sobic010G188000--Sobic002G371600 Sobic010G188000--Sobic006G181800 Sobic001G451300 Sobic001G451300 Sobic010G188000--Sobic001G451300 Sobic002G160700 Sobic002G160700 Sobic010G188000--Sobic002G160700 Sobic004G315500 Sobic004G315500 Sobic010G188000--Sobic004G315500 Sobic005G010900 Sobic005G010900 Sobic010G188000--Sobic005G010900 Sobic010G188000--Sobic010G236600 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic003G179500 Sobic003G179500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic007G139500--Sobic009G214100 Sobic002G423500 Sobic002G423500 Sobic004G215700--Sobic002G423500 Sobic004G326600 Sobic004G326600 Sobic004G215700--Sobic004G326600 Sobic005G163700 Sobic005G163700 Sobic004G215700--Sobic005G163700 Sobic006G024700 Sobic006G024700 Sobic004G215700--Sobic006G024700 Sobic004G047200 Sobic004G047200 Sobic004G215700--Sobic004G047200 Sobic001G460500 Sobic001G460500 Sobic004G215700--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic004G215700--Sobic003G008600 Sobic003G388900 Sobic003G388900 Sobic004G215700--Sobic003G388900 Sobic004G212100 Sobic004G212100 Sobic004G215700--Sobic004G212100 Sobic009G214100--Sobic003G179500 Sobic009G214100--Sobic007G139500 Sobic010G103700 Sobic010G103700 Sobic009G214100--Sobic010G103700 Sobic002G303800 Sobic002G303800 Sobic009G214100--Sobic002G303800 Sobic005G144600 Sobic005G144600 Sobic009G214100--Sobic005G144600 Sobic010G051100 Sobic010G051100 Sobic009G214100--Sobic010G051100 Sobic003G201000 Sobic003G201000 Sobic009G214100--Sobic003G201000 Sobic006G120600 Sobic006G120600 Sobic009G214100--Sobic006G120600 Sobic008G127550 Sobic008G127550 Sobic009G214100--Sobic008G127550 Sobic007G173000--Sobic006G071628 Sobic007G173000--Sobic001G051300 Sobic007G173000--Sobic001G196000 Sobic007G173000--Sobic007G139500 Sobic005G129201 Sobic005G129201 Sobic007G173000--Sobic005G129201 Sobic002G232400 Sobic002G232400 Sobic007G173000--Sobic002G232400 Sobic009G061000 Sobic009G061000 Sobic007G173000--Sobic009G061000 Sobic002G370400 Sobic002G370400 Sobic007G173000--Sobic002G370400 Sobic009G256700 Sobic009G256700 Sobic007G173000--Sobic009G256700 Sobic005G110535 Sobic005G110535 Sobic004G156200--Sobic005G110535 Sobic005G068800 Sobic005G068800 Sobic004G156200--Sobic005G068800 Sobic003G423600 Sobic003G423600 Sobic004G156200--Sobic003G423600 Sobic002G290000 Sobic002G290000 Sobic004G156200--Sobic002G290000 Sobic009G087000 Sobic009G087000 Sobic004G156200--Sobic009G087000 Sobic006G281400 Sobic006G281400 Sobic004G156200--Sobic006G281400 Sobic003G369200 Sobic003G369200 Sobic004G156200--Sobic003G369200 Sobic009G146250 Sobic009G146250 Sobic004G156200--Sobic009G146250 Sobic004G156200--Sobic009G052100 Sobic006G208400 Sobic006G208400 Sobic010G236600--Sobic006G208400 Sobic010G236600--Sobic010G188000 Sobic009G045900 Sobic009G045900 Sobic010G236600--Sobic009G045900 Sobic010G236600--Sobic001G460500 Sobic010G236600--Sobic003G008600 Sobic002G145300 Sobic002G145300 Sobic010G236600--Sobic002G145300 Sobic010G236600--Sobic010G250800 Sobic010G236600--Sobic001G368100 Sobic010G236600--Sobic002G056400
Octagon: transcription factors


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