Gene annotation
Transcriptome id Sobic.002G145300.1
Synonym PRMT3, Sb02g014470, ATPRMT3
Functional annotation ZOS7-13 - C2H2 zinc finger protein, expressed
UniProt C5X7D9
Pfam PF12756 PF12847
Panther DB PTHR11006 PTHR11006:SF55
NCBI CDD KOG1499; Protein arginine N-methyltransferase PRMT1 and related enzymes
KEGG Orthology K11436; type I protein arginine methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0006479protein methylation


Orthologs (automatic annotation)
TAIR AT3G12270 : protein arginine methyltransferase 3
RAP-DB (Rice) LOC_Os07g44640.1 : ZOS7-13 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a017622 , Zm00025a045969
Brachypodium -
Barley HORVU2Hr1G026200.9 , HORVU2Hr1G026200.2 , HORVU2Hr1G026200.3 , HORVU2Hr1G026200.1 , HORVU2Hr1G026200.6 , HORVU2Hr1G026200.7 , HORVU2Hr1G026200.4 , HORVU2Hr1G026200.5 , HORVU2Hr1G026200.8 , HORVU2Hr1G026200.10 , HORVU2Hr1G026200.11 , HORVU2Hr1G026200.12 , HORVU2Hr1G026200.13 , HORVU2Hr1G026200.14
Wheat TraesCS2D02G151900 , TraesCS2A02G147100
Populus -


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cDNA sequences
Sobic.002G145300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G236600 oligopeptidase, putative, expressed K01410: mitochondrial intermediate peptidase
2 Sobic.001G368100 expressed protein K18158: nuclear control of ATPase protein 2
3 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
4 Sobic.005G012800 expressed protein -
5 Sobic.004G082700 PPR repeat containing protein, expressed -
6 Sobic.002G152900 OsTOP6B - Topoisomerase 6 subunit B, expressed -
7 Sobic.007G137350 - K14549: U3 small nucleolar RNA-associated protein 15
8 Sobic.006G198600 WD domain, G-beta repeat domain containing protein, expressed K14555: UTP13, U3 small nucleolar RNA-associated protein 13
9 Sobic.003G123200 la domain containing protein, putative, expressed K18757: la-related protein 1
10 Sobic.010G161525 - -
11 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
12 Sobic.006G251600 exosome complex exonuclease rrp4, putative, expressed K03679: RRP4, exosome complex component RRP4
13 Sobic.010G188000 elongation factor, putative, expressed K12852: 116 kDa U5 small nuclear ribonucleoprotein component
14 Sobic.009G081500 per1-like family protein, putative, expressed -
15 Sobic.003G144000 pentatricopeptide, putative, expressed -
16 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
17 Sobic.009G010300 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
18 Sobic.002G365900 WD repeat-containing protein 12, putative, expressed K14863: WDR12, ribosome biogenesis protein
19 Sobic.001G008500 metallo-beta-lactamase, putative, expressed K14403: CPSF3, cleavage and polyadenylation specificity factor subunit 3
20 Sobic.001G157300 expressed protein K14793: ribosomal RNA-processing protein 9


Gene co-expression network
sample Sobic002G145300 Sobic002G145300 Sobic010G236600 Sobic010G236600 Sobic002G145300--Sobic010G236600 Sobic001G368100 Sobic001G368100 Sobic002G145300--Sobic001G368100 Sobic001G073150 Sobic001G073150 Sobic002G145300--Sobic001G073150 Sobic005G012800 Sobic005G012800 Sobic002G145300--Sobic005G012800 Sobic004G082700 Sobic004G082700 Sobic002G145300--Sobic004G082700 Sobic002G152900 Sobic002G152900 Sobic002G145300--Sobic002G152900 Sobic007G137350 Sobic007G137350 Sobic002G145300--Sobic007G137350 Sobic006G198600 Sobic006G198600 Sobic002G145300--Sobic006G198600 Sobic003G123200 Sobic003G123200 Sobic002G145300--Sobic003G123200 Sobic006G208400 Sobic006G208400 Sobic010G236600--Sobic006G208400 Sobic010G188000 Sobic010G188000 Sobic010G236600--Sobic010G188000 Sobic009G045900 Sobic009G045900 Sobic010G236600--Sobic009G045900 Sobic001G460500 Sobic001G460500 Sobic010G236600--Sobic001G460500 Sobic003G008600 Sobic003G008600 Sobic010G236600--Sobic003G008600 Sobic010G236600--Sobic002G145300 Sobic010G250800 Sobic010G250800 Sobic010G236600--Sobic010G250800 Sobic010G236600--Sobic001G368100 Sobic002G056400 Sobic002G056400 Sobic010G236600--Sobic002G056400 Sobic006G071628 Sobic006G071628 Sobic001G368100--Sobic006G071628 Sobic001G368100--Sobic002G152900 Sobic001G368100--Sobic010G188000 Sobic007G139500 Sobic007G139500 Sobic001G368100--Sobic007G139500 Sobic004G215700 Sobic004G215700 Sobic001G368100--Sobic004G215700 Sobic009G214100 Sobic009G214100 Sobic001G368100--Sobic009G214100 Sobic007G173000 Sobic007G173000 Sobic001G368100--Sobic007G173000 Sobic004G156200 Sobic004G156200 Sobic001G368100--Sobic004G156200 Sobic001G368100--Sobic010G236600 Sobic010G120300 Sobic010G120300 Sobic001G073150--Sobic010G120300 Sobic010G090500 Sobic010G090500 Sobic001G073150--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic010G096100 Sobic010G096100 Sobic001G073150--Sobic010G096100 Sobic009G125900 Sobic009G125900 Sobic001G073150--Sobic009G125900 Sobic009G251100 Sobic009G251100 Sobic001G073150--Sobic009G251100 Sobic001G159800 Sobic001G159800 Sobic001G073150--Sobic001G159800 Sobic008G174900 Sobic008G174900 Sobic001G073150--Sobic008G174900 Sobic005G071800 Sobic005G071800 Sobic005G012800--Sobic005G071800 Sobic005G012800--Sobic002G145300 Sobic002G083600 Sobic002G083600 Sobic005G012800--Sobic002G083600 Sobic005G012800--Sobic001G073150 Sobic005G093500 Sobic005G093500 Sobic005G012800--Sobic005G093500 Sobic004G296300 Sobic004G296300 Sobic005G012800--Sobic004G296300 Sobic005G012800--Sobic009G251100 Sobic001G029800 Sobic001G029800 Sobic005G012800--Sobic001G029800 Sobic005G012800--Sobic001G368100 Sobic008G100700 Sobic008G100700 Sobic004G082700--Sobic008G100700 Sobic001G167500 Sobic001G167500 Sobic004G082700--Sobic001G167500 Sobic010G134100 Sobic010G134100 Sobic004G082700--Sobic010G134100 Sobic003G144000 Sobic003G144000 Sobic004G082700--Sobic003G144000 Sobic001G371100 Sobic001G371100 Sobic004G082700--Sobic001G371100 Sobic002G268100 Sobic002G268100 Sobic004G082700--Sobic002G268100 Sobic005G098000 Sobic005G098000 Sobic004G082700--Sobic005G098000 Sobic001G008500 Sobic001G008500 Sobic004G082700--Sobic001G008500 Sobic001G493400 Sobic001G493400 Sobic004G082700--Sobic001G493400 Sobic004G038100 Sobic004G038100 Sobic002G152900--Sobic004G038100 Sobic002G214700 Sobic002G214700 Sobic002G152900--Sobic002G214700 Sobic002G152900--Sobic010G250800 Sobic007G114000 Sobic007G114000 Sobic002G152900--Sobic007G114000 Sobic002G152900--Sobic001G368100 Sobic004G215900 Sobic004G215900 Sobic002G152900--Sobic004G215900 Sobic002G152900--Sobic002G056400 Sobic003G250900 Sobic003G250900 Sobic002G152900--Sobic003G250900 Sobic006G181800 Sobic006G181800 Sobic002G152900--Sobic006G181800 Sobic009G071700 Sobic009G071700 Sobic007G137350--Sobic009G071700 Sobic004G173100 Sobic004G173100 Sobic007G137350--Sobic004G173100 Sobic007G092200 Sobic007G092200 Sobic007G137350--Sobic007G092200 Sobic005G100900 Sobic005G100900 Sobic007G137350--Sobic005G100900 Sobic009G228500 Sobic009G228500 Sobic007G137350--Sobic009G228500 Sobic007G137350--Sobic004G082700 Sobic006G251600 Sobic006G251600 Sobic007G137350--Sobic006G251600 Sobic001G157300 Sobic001G157300 Sobic007G137350--Sobic001G157300 Sobic007G137350--Sobic006G198600 Sobic006G198600--Sobic003G123200 Sobic006G198600--Sobic009G071700 Sobic001G401400 Sobic001G401400 Sobic006G198600--Sobic001G401400 Sobic008G163500 Sobic008G163500 Sobic006G198600--Sobic008G163500 Sobic006G198600--Sobic006G251600 Sobic008G049100 Sobic008G049100 Sobic006G198600--Sobic008G049100 Sobic003G425100 Sobic003G425100 Sobic006G198600--Sobic003G425100 Sobic004G036700 Sobic004G036700 Sobic006G198600--Sobic004G036700 Sobic006G198600--Sobic001G157300 Sobic005G098800 Sobic005G098800 Sobic003G123200--Sobic005G098800 Sobic003G123200--Sobic008G163500 Sobic010G205900 Sobic010G205900 Sobic003G123200--Sobic010G205900 Sobic009G246500 Sobic009G246500 Sobic003G123200--Sobic009G246500 Sobic003G123200--Sobic008G049100 Sobic005G028100 Sobic005G028100 Sobic003G123200--Sobic005G028100 Sobic002G423400 Sobic002G423400 Sobic003G123200--Sobic002G423400 Sobic003G123200--Sobic006G198600 Sobic010G224700 Sobic010G224700 Sobic003G123200--Sobic010G224700
Octagon: transcription factors


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