Gene annotation
Transcriptome id Sobic.005G012800.2,Sobic.005G012800.3
Synonym Sb05g001100
Functional annotation expressed protein
UniProt C5Y3G4
Pfam PF04578 PF13968
Panther DB PTHR31325 PTHR31325:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45470 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os10g11310.2,LOC_Os10g11310.3 : expressed protein
MaizeGDB (Corn) Zm00025a055517 , Zm00025a012182
Brachypodium KQK16937
Barley -
Wheat TraesCS2D02G121800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G071800 - -
2 Sobic.002G145300 ZOS7-13 - C2H2 zinc finger protein, expressed K11436: type I protein arginine methyltransferase
3 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
4 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
5 Sobic.005G093500 expressed protein -
6 Sobic.004G296300 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
7 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
8 Sobic.001G029800 expressed protein -
9 Sobic.001G368100 expressed protein K18158: nuclear control of ATPase protein 2
10 Sobic.010G007000 Leucine Rich Repeat family protein, expressed -
11 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
12 Sobic.001G388000 GTPase-activating protein, putative, expressed -
13 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
14 Sobic.001G402400 expressed protein -
15 Sobic.003G279800 plasminogen activator inhibitor 1 RNA-binding protein, putative, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
16 Sobic.002G194600 integral membrane protein, putative, expressed -
17 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
18 Sobic.003G227900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 72A1, putative, expressed -
19 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
20 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)


Gene co-expression network
sample Sobic005G012800 Sobic005G012800 Sobic005G071800 Sobic005G071800 Sobic005G012800--Sobic005G071800 Sobic002G145300 Sobic002G145300 Sobic005G012800--Sobic002G145300 Sobic002G083600 Sobic002G083600 Sobic005G012800--Sobic002G083600 Sobic001G073150 Sobic001G073150 Sobic005G012800--Sobic001G073150 Sobic005G093500 Sobic005G093500 Sobic005G012800--Sobic005G093500 Sobic004G296300 Sobic004G296300 Sobic005G012800--Sobic004G296300 Sobic009G251100 Sobic009G251100 Sobic005G012800--Sobic009G251100 Sobic001G029800 Sobic001G029800 Sobic005G012800--Sobic001G029800 Sobic001G368100 Sobic001G368100 Sobic005G012800--Sobic001G368100 Sobic005G071800--Sobic005G012800 Sobic005G071800--Sobic005G093500 Sobic009G063400 Sobic009G063400 Sobic005G071800--Sobic009G063400 Sobic001G196000 Sobic001G196000 Sobic005G071800--Sobic001G196000 Sobic006G256200 Sobic006G256200 Sobic005G071800--Sobic006G256200 Sobic010G096100 Sobic010G096100 Sobic005G071800--Sobic010G096100 Sobic002G064600 Sobic002G064600 Sobic005G071800--Sobic002G064600 Sobic003G258800 Sobic003G258800 Sobic005G071800--Sobic003G258800 Sobic005G071800--Sobic002G083600 Sobic010G236600 Sobic010G236600 Sobic002G145300--Sobic010G236600 Sobic002G145300--Sobic001G368100 Sobic002G145300--Sobic001G073150 Sobic002G145300--Sobic005G012800 Sobic004G082700 Sobic004G082700 Sobic002G145300--Sobic004G082700 Sobic002G152900 Sobic002G152900 Sobic002G145300--Sobic002G152900 Sobic007G137350 Sobic007G137350 Sobic002G145300--Sobic007G137350 Sobic006G198600 Sobic006G198600 Sobic002G145300--Sobic006G198600 Sobic003G123200 Sobic003G123200 Sobic002G145300--Sobic003G123200 Sobic003G371400 Sobic003G371400 Sobic002G083600--Sobic003G371400 Sobic005G112000 Sobic005G112000 Sobic002G083600--Sobic005G112000 Sobic009G221900 Sobic009G221900 Sobic002G083600--Sobic009G221900 Sobic001G402400 Sobic001G402400 Sobic002G083600--Sobic001G402400 Sobic007G064900 Sobic007G064900 Sobic002G083600--Sobic007G064900 Sobic002G207000 Sobic002G207000 Sobic002G083600--Sobic002G207000 Sobic010G234300 Sobic010G234300 Sobic002G083600--Sobic010G234300 Sobic002G083600--Sobic005G012800 Sobic001G365200 Sobic001G365200 Sobic002G083600--Sobic001G365200 Sobic010G120300 Sobic010G120300 Sobic001G073150--Sobic010G120300 Sobic010G090500 Sobic010G090500 Sobic001G073150--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic001G073150--Sobic010G096100 Sobic009G125900 Sobic009G125900 Sobic001G073150--Sobic009G125900 Sobic001G073150--Sobic009G251100 Sobic001G159800 Sobic001G159800 Sobic001G073150--Sobic001G159800 Sobic008G174900 Sobic008G174900 Sobic001G073150--Sobic008G174900 Sobic002G041150 Sobic002G041150 Sobic005G093500--Sobic002G041150 Sobic005G093500--Sobic005G071800 Sobic005G093500--Sobic003G371400 Sobic004G085500 Sobic004G085500 Sobic005G093500--Sobic004G085500 Sobic005G093500--Sobic005G012800 Sobic005G093500--Sobic007G064900 Sobic005G093500--Sobic006G256200 Sobic004G052401 Sobic004G052401 Sobic005G093500--Sobic004G052401 Sobic005G093500--Sobic002G083600 Sobic004G296300--Sobic009G251100 Sobic007G130900 Sobic007G130900 Sobic004G296300--Sobic007G130900 Sobic004G296300--Sobic001G196000 Sobic007G139500 Sobic007G139500 Sobic004G296300--Sobic007G139500 Sobic004G296300--Sobic010G096100 Sobic003G017500 Sobic003G017500 Sobic004G296300--Sobic003G017500 Sobic004G296300--Sobic008G174900 Sobic004G296300--Sobic010G120300 Sobic007G079600 Sobic007G079600 Sobic004G296300--Sobic007G079600 Sobic009G251100--Sobic004G296300 Sobic009G251100--Sobic010G120300 Sobic009G251100--Sobic010G096100 Sobic003G419600 Sobic003G419600 Sobic009G251100--Sobic003G419600 Sobic009G251100--Sobic001G196000 Sobic009G251100--Sobic001G073150 Sobic004G243800 Sobic004G243800 Sobic009G251100--Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic009G251100--Sobic001G437500 Sobic009G251100--Sobic009G063400 Sobic010G008900 Sobic010G008900 Sobic001G029800--Sobic010G008900 Sobic003G294500 Sobic003G294500 Sobic001G029800--Sobic003G294500 Sobic001G177900 Sobic001G177900 Sobic001G029800--Sobic001G177900 Sobic002G191000 Sobic002G191000 Sobic001G029800--Sobic002G191000 Sobic007G168900 Sobic007G168900 Sobic001G029800--Sobic007G168900 Sobic003G314900 Sobic003G314900 Sobic001G029800--Sobic003G314900 Sobic006G029300 Sobic006G029300 Sobic001G029800--Sobic006G029300 Sobic005G000500 Sobic005G000500 Sobic001G029800--Sobic005G000500 Sobic010G147700 Sobic010G147700 Sobic001G029800--Sobic010G147700 Sobic006G071628 Sobic006G071628 Sobic001G368100--Sobic006G071628 Sobic001G368100--Sobic002G152900 Sobic010G188000 Sobic010G188000 Sobic001G368100--Sobic010G188000 Sobic001G368100--Sobic007G139500 Sobic004G215700 Sobic004G215700 Sobic001G368100--Sobic004G215700 Sobic009G214100 Sobic009G214100 Sobic001G368100--Sobic009G214100 Sobic007G173000 Sobic007G173000 Sobic001G368100--Sobic007G173000 Sobic004G156200 Sobic004G156200 Sobic001G368100--Sobic004G156200 Sobic001G368100--Sobic010G236600
Octagon: transcription factors


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