Gene annotation
Transcriptome id Sobic.002G083600.1
Synonym RAP2.7, Sb02g007000, TOE1
Functional annotation AP2 domain containing protein, expressed
UniProt C5XDI6
Pfam PF00847
Panther DB PTHR32467 PTHR32467:SF30
NCBI CDD -
KEGG Orthology K09284; AP2-like factor, euAP2 lineage
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0007275multicellular organism development


Orthologs (automatic annotation)
TAIR AT2G28550 : related to AP2.7
RAP-DB (Rice) LOC_Os07g13170.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a045453 , Zm00025a008787
Brachypodium KQK12460 , KQK20298 , KQK20299 , KQK20296 , KQK12459 , KQK20297
Barley -
Wheat TraesCS5A02G473800 , TraesCS5A02G473800 , TraesCS5A02G473800 , TraesCS5D02G486600 , TraesCS5D02G486600
Populus -


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cDNA sequences
Sobic.002G083600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G371400 proton-dependent oligopeptide transport, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
3 Sobic.009G221900 seed storage 2S albumin superfamily("PubMedID : 26759170,PubMedID : 24597475")@LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.001G402400 expressed protein -
5 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
6 Sobic.002G207000 - -
7 Sobic.010G234300 - -
8 Sobic.005G012800 expressed protein -
9 Sobic.001G365200 aminotransferase domain containing protein, putative, expressed -
10 Sobic.006G256200 Myb-like DNA-binding domain containing protein, putative, expressed -
11 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
13 Sobic.005G115600 6-phosphogluconate dehydrogenase, decarboxylating, putative, expressed K00033: PGD, gnd, 6-phosphogluconate dehydrogenase
14 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
15 Sobic.001G263900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
16 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
17 Sobic.003G258800 glutamate synthase, chloroplast precursor, putative, expressed K00264: glutamate synthase (NADH)
18 Sobic.005G071800 - -
19 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
20 Sobic.004G323900 protein kinase, putative, expressed K09553: stress-induced-phosphoprotein 1


Gene co-expression network
sample Sobic002G083600 Sobic002G083600 Sobic003G371400 Sobic003G371400 Sobic002G083600--Sobic003G371400 Sobic005G112000 Sobic005G112000 Sobic002G083600--Sobic005G112000 Sobic009G221900 Sobic009G221900 Sobic002G083600--Sobic009G221900 Sobic001G402400 Sobic001G402400 Sobic002G083600--Sobic001G402400 Sobic007G064900 Sobic007G064900 Sobic002G083600--Sobic007G064900 Sobic002G207000 Sobic002G207000 Sobic002G083600--Sobic002G207000 Sobic010G234300 Sobic010G234300 Sobic002G083600--Sobic010G234300 Sobic005G012800 Sobic005G012800 Sobic002G083600--Sobic005G012800 Sobic001G365200 Sobic001G365200 Sobic002G083600--Sobic001G365200 Sobic003G371400--Sobic005G112000 Sobic001G343400 Sobic001G343400 Sobic003G371400--Sobic001G343400 Sobic008G055800 Sobic008G055800 Sobic003G371400--Sobic008G055800 Sobic003G371400--Sobic009G221900 Sobic003G082700 Sobic003G082700 Sobic003G371400--Sobic003G082700 Sobic001G208600 Sobic001G208600 Sobic003G371400--Sobic001G208600 Sobic003G378800 Sobic003G378800 Sobic003G371400--Sobic003G378800 Sobic003G099166 Sobic003G099166 Sobic003G371400--Sobic003G099166 Sobic003G371400--Sobic002G083600 Sobic005G112000--Sobic003G371400 Sobic005G112000--Sobic003G082700 Sobic001G388000 Sobic001G388000 Sobic005G112000--Sobic001G388000 Sobic010G133932 Sobic010G133932 Sobic005G112000--Sobic010G133932 Sobic003G270400 Sobic003G270400 Sobic005G112000--Sobic003G270400 Sobic003G366300 Sobic003G366300 Sobic005G112000--Sobic003G366300 Sobic005G112000--Sobic001G208600 Sobic010G007000 Sobic010G007000 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic001G263900 Sobic001G263900 Sobic009G221900--Sobic001G263900 Sobic002G347300 Sobic002G347300 Sobic009G221900--Sobic002G347300 Sobic009G017500 Sobic009G017500 Sobic009G221900--Sobic009G017500 Sobic009G221900--Sobic003G099166 Sobic009G221900--Sobic003G371400 Sobic008G091557 Sobic008G091557 Sobic009G221900--Sobic008G091557 Sobic009G221900--Sobic001G208600 Sobic002G030800 Sobic002G030800 Sobic009G221900--Sobic002G030800 Sobic009G221900--Sobic002G207000 Sobic001G402400--Sobic003G270400 Sobic003G052100 Sobic003G052100 Sobic001G402400--Sobic003G052100 Sobic002G275500 Sobic002G275500 Sobic001G402400--Sobic002G275500 Sobic003G296500 Sobic003G296500 Sobic001G402400--Sobic003G296500 Sobic010G220300 Sobic010G220300 Sobic001G402400--Sobic010G220300 Sobic008G014700 Sobic008G014700 Sobic001G402400--Sobic008G014700 Sobic005G057000 Sobic005G057000 Sobic001G402400--Sobic005G057000 Sobic002G376100 Sobic002G376100 Sobic001G402400--Sobic002G376100 Sobic006G009500 Sobic006G009500 Sobic001G402400--Sobic006G009500 Sobic002G029500 Sobic002G029500 Sobic007G064900--Sobic002G029500 Sobic010G242800 Sobic010G242800 Sobic007G064900--Sobic010G242800 Sobic008G033100 Sobic008G033100 Sobic007G064900--Sobic008G033100 Sobic005G097900 Sobic005G097900 Sobic007G064900--Sobic005G097900 Sobic005G182900 Sobic005G182900 Sobic007G064900--Sobic005G182900 Sobic005G110511 Sobic005G110511 Sobic007G064900--Sobic005G110511 Sobic002G019000 Sobic002G019000 Sobic007G064900--Sobic002G019000 Sobic001G415100 Sobic001G415100 Sobic007G064900--Sobic001G415100 Sobic005G065700 Sobic005G065700 Sobic007G064900--Sobic005G065700 Sobic003G079100 Sobic003G079100 Sobic002G207000--Sobic003G079100 Sobic003G255600 Sobic003G255600 Sobic002G207000--Sobic003G255600 Sobic001G471800 Sobic001G471800 Sobic002G207000--Sobic001G471800 Sobic006G224500 Sobic006G224500 Sobic002G207000--Sobic006G224500 Sobic002G082000 Sobic002G082000 Sobic002G207000--Sobic002G082000 Sobic007G015100 Sobic007G015100 Sobic002G207000--Sobic007G015100 Sobic001G514700 Sobic001G514700 Sobic002G207000--Sobic001G514700 Sobic006G108300 Sobic006G108300 Sobic002G207000--Sobic006G108300 Sobic005G182800 Sobic005G182800 Sobic002G207000--Sobic005G182800 Sobic001G443100 Sobic001G443100 Sobic010G234300--Sobic001G443100 Sobic010G234300--Sobic001G471800 Sobic010G234300--Sobic003G255600 Sobic008G079800 Sobic008G079800 Sobic010G234300--Sobic008G079800 Sobic005G219700 Sobic005G219700 Sobic010G234300--Sobic005G219700 Sobic009G106500 Sobic009G106500 Sobic010G234300--Sobic009G106500 Sobic010G234300--Sobic003G082700 Sobic010G234300--Sobic002G207000 Sobic010G234300--Sobic007G064900 Sobic005G071800 Sobic005G071800 Sobic005G012800--Sobic005G071800 Sobic002G145300 Sobic002G145300 Sobic005G012800--Sobic002G145300 Sobic005G012800--Sobic002G083600 Sobic001G073150 Sobic001G073150 Sobic005G012800--Sobic001G073150 Sobic005G093500 Sobic005G093500 Sobic005G012800--Sobic005G093500 Sobic004G296300 Sobic004G296300 Sobic005G012800--Sobic004G296300 Sobic009G251100 Sobic009G251100 Sobic005G012800--Sobic009G251100 Sobic001G029800 Sobic001G029800 Sobic005G012800--Sobic001G029800 Sobic001G368100 Sobic001G368100 Sobic005G012800--Sobic001G368100 Sobic004G161900 Sobic004G161900 Sobic001G365200--Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic001G365200--Sobic003G368000 Sobic002G383900 Sobic002G383900 Sobic001G365200--Sobic002G383900 Sobic003G105000 Sobic003G105000 Sobic001G365200--Sobic003G105000 Sobic005G022500 Sobic005G022500 Sobic001G365200--Sobic005G022500 Sobic010G045400 Sobic010G045400 Sobic001G365200--Sobic010G045400 Sobic007G119500 Sobic007G119500 Sobic001G365200--Sobic007G119500 Sobic006G000600 Sobic006G000600 Sobic001G365200--Sobic006G000600 Sobic008G037900 Sobic008G037900 Sobic001G365200--Sobic008G037900
Octagon: transcription factors


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