Gene annotation
Transcriptome id Sobic.001G240500.2,Sobic.001G240500.1
Synonym Sb01g021290
Functional annotation flavoprotein wrbA, putative, expressed
UniProt A0A1B6QKM3
Pfam PF03358
Panther DB PTHR30546 PTHR30546:SF3
NCBI CDD KOG3135; 1,4-benzoquinone reductase-like
KEGG Orthology K03809; NAD(P)H dehydrogenase (quinone)
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G36750 : Quinone reductase family protein
RAP-DB (Rice) LOC_Os03g53730.1 : flavoprotein wrbA, putative, expressed
MaizeGDB (Corn) Zm00025a032545 , Zm00025a017764 , Zm00025a021251
Brachypodium KQJ96799 , KQJ96798
Barley -
Wheat TraesCS1D02G134600 , TraesCS1A02G136100 , TraesCS1B02G155100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G028400 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
2 Sobic.006G183900 cytochrome P450, putative, expressed -
3 Sobic.010G212200 synthase, putative, expressed K02377: TSTA3, GDP-L-fucose synthase
4 Sobic.009G157300 Probable beta-D-xylosidase 2 (Precursor)(PubMedID : 26186930)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
5 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.002G271300 NC domain-containing protein, putative, expressed -
7 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
8 Sobic.002G365500 igA FC receptor precursor, putative, expressed -
9 Sobic.001G284600 xyloglucan endotransglucosylase/hydrolase 29(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
11 Sobic.006G038200 receptor protein kinase, putative, expressed -
12 Sobic.007G109600 expressed protein -
13 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
14 Sobic.006G282300 - -
15 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
16 Sobic.009G236100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
17 Sobic.001G217500 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.001G057300 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
19 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
20 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase


Gene co-expression network
sample Sobic001G240500 Sobic001G240500 Sobic006G028400 Sobic006G028400 Sobic001G240500--Sobic006G028400 Sobic006G183900 Sobic006G183900 Sobic001G240500--Sobic006G183900 Sobic010G212200 Sobic010G212200 Sobic001G240500--Sobic010G212200 Sobic009G157300 Sobic009G157300 Sobic001G240500--Sobic009G157300 Sobic007G157900 Sobic007G157900 Sobic001G240500--Sobic007G157900 Sobic002G271300 Sobic002G271300 Sobic001G240500--Sobic002G271300 Sobic004G071000 Sobic004G071000 Sobic001G240500--Sobic004G071000 Sobic002G365500 Sobic002G365500 Sobic001G240500--Sobic002G365500 Sobic001G284600 Sobic001G284600 Sobic001G240500--Sobic001G284600 Sobic006G028400--Sobic006G183900 Sobic003G203600 Sobic003G203600 Sobic006G028400--Sobic003G203600 Sobic007G170300 Sobic007G170300 Sobic006G028400--Sobic007G170300 Sobic007G109600 Sobic007G109600 Sobic006G028400--Sobic007G109600 Sobic007G178900 Sobic007G178900 Sobic006G028400--Sobic007G178900 Sobic002G185800 Sobic002G185800 Sobic006G028400--Sobic002G185800 Sobic006G028400--Sobic002G365500 Sobic006G028400--Sobic004G071000 Sobic002G365550 Sobic002G365550 Sobic006G028400--Sobic002G365550 Sobic003G287200 Sobic003G287200 Sobic006G183900--Sobic003G287200 Sobic006G183900--Sobic007G109600 Sobic006G183900--Sobic006G028400 Sobic007G090472 Sobic007G090472 Sobic006G183900--Sobic007G090472 Sobic008G034700 Sobic008G034700 Sobic006G183900--Sobic008G034700 Sobic004G248500 Sobic004G248500 Sobic006G183900--Sobic004G248500 Sobic006G183900--Sobic007G170300 Sobic002G365600 Sobic002G365600 Sobic006G183900--Sobic002G365600 Sobic006G183900--Sobic002G365500 Sobic001G060300 Sobic001G060300 Sobic010G212200--Sobic001G060300 Sobic004G262300 Sobic004G262300 Sobic010G212200--Sobic004G262300 Sobic001G392800 Sobic001G392800 Sobic010G212200--Sobic001G392800 Sobic001G145500 Sobic001G145500 Sobic010G212200--Sobic001G145500 Sobic001G451901 Sobic001G451901 Sobic010G212200--Sobic001G451901 Sobic003G330500 Sobic003G330500 Sobic010G212200--Sobic003G330500 Sobic004G164000 Sobic004G164000 Sobic010G212200--Sobic004G164000 Sobic002G402500 Sobic002G402500 Sobic010G212200--Sobic002G402500 Sobic010G212200--Sobic001G240500 Sobic009G157300--Sobic001G240500 Sobic004G059600 Sobic004G059600 Sobic009G157300--Sobic004G059600 Sobic009G221900 Sobic009G221900 Sobic009G157300--Sobic009G221900 Sobic006G156600 Sobic006G156600 Sobic009G157300--Sobic006G156600 Sobic002G167000 Sobic002G167000 Sobic009G157300--Sobic002G167000 Sobic005G022500 Sobic005G022500 Sobic009G157300--Sobic005G022500 Sobic003G287450 Sobic003G287450 Sobic009G157300--Sobic003G287450 Sobic003G105000 Sobic003G105000 Sobic009G157300--Sobic003G105000 Sobic001G263900 Sobic001G263900 Sobic009G157300--Sobic001G263900 Sobic009G238900 Sobic009G238900 Sobic007G157900--Sobic009G238900 Sobic004G351500 Sobic004G351500 Sobic007G157900--Sobic004G351500 Sobic010G194100 Sobic010G194100 Sobic007G157900--Sobic010G194100 Sobic002G232700 Sobic002G232700 Sobic007G157900--Sobic002G232700 Sobic009G054100 Sobic009G054100 Sobic007G157900--Sobic009G054100 Sobic003G417100 Sobic003G417100 Sobic007G157900--Sobic003G417100 Sobic004G062500 Sobic004G062500 Sobic007G157900--Sobic004G062500 Sobic004G262500 Sobic004G262500 Sobic007G157900--Sobic004G262500 Sobic007G127100 Sobic007G127100 Sobic007G157900--Sobic007G127100 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic002G365801 Sobic002G365801 Sobic004G071000--Sobic002G365801 Sobic004G071000--Sobic002G365550 Sobic002G368300 Sobic002G368300 Sobic004G071000--Sobic002G368300 Sobic004G071000--Sobic002G365500 Sobic008G055100 Sobic008G055100 Sobic004G071000--Sobic008G055100 Sobic010G115700 Sobic010G115700 Sobic004G071000--Sobic010G115700 Sobic010G212500 Sobic010G212500 Sobic004G071000--Sobic010G212500 Sobic004G071000--Sobic002G365600 Sobic003G053400 Sobic003G053400 Sobic004G071000--Sobic003G053400 Sobic002G365500--Sobic002G365550 Sobic002G365500--Sobic002G365600 Sobic002G365500--Sobic010G115700 Sobic002G365500--Sobic002G365801 Sobic002G365500--Sobic004G071000 Sobic002G365500--Sobic002G368300 Sobic002G365500--Sobic006G183900 Sobic002G365500--Sobic006G028400 Sobic003G269500 Sobic003G269500 Sobic002G365500--Sobic003G269500 Sobic001G284600--Sobic006G028400 Sobic001G284600--Sobic007G157900 Sobic005G168800 Sobic005G168800 Sobic001G284600--Sobic005G168800 Sobic003G050200 Sobic003G050200 Sobic001G284600--Sobic003G050200 Sobic003G416300 Sobic003G416300 Sobic001G284600--Sobic003G416300 Sobic001G284600--Sobic001G240500 Sobic001G284600--Sobic004G351500 Sobic009G062000 Sobic009G062000 Sobic001G284600--Sobic009G062000 Sobic008G128900 Sobic008G128900 Sobic001G284600--Sobic008G128900
Octagon: transcription factors


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